Splice junction sequence |
CAGGTCCAGCAGTACGTGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGCAGAAGGTGGTTA TGAAGAAGTTGATCTTGTTTTGCCAGGCACTGGAAGgaatcttcgagaaatgtttcatatcgat gctgcagattacatgatgtctatatgtggtggtgatagtctaaaggagctttcttcacctggga aaagtggc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 132 Transcript exons: 28183133-28183205,28184837-28184895 GAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGAT AGTCTAAAGGTTAGGGCAGCAGAAGGTGGTTATGAAGAAGTTGATCTTGTTTTGCCAGGCACTG GAAG
Transcript length: 159 Transcript exons: 28183133-28183162,28184767-28184895 GAATCTTCGAGAAATGTTTCATATCGATGCGGGATTTCTACTAGTTGCTGCTGATGAGCCAGGT CCAGCAGTACGTGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGCAGAAGGTGGTTATGAAG AAGTTGATCTTGTTTTGCCAGGCACTGGAAG
Transcript length: 191 Transcript exons: 28183133-28183221,28184794-28184895 GAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGAT AGTCTAAAGGAGCTTTCTTCACCTGGCCAGGTCCAGCAGTACGTGGTTCGCACATAAGAGGAAG CATGGTTAGGGCAGCAGAAGGTGGTTATGAAGAAGTTGATCTTGTTTTGCCAGGCACTGGAAG
Transcript length: 212 Transcript exons: 28183133-28183208,28184760-28184895 GAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGAT AGTCTAAAGGAGCTTCAAAGGGATTTCTACTAGTTGCTGCTGATGAGCCAGGTCCAGCAGTACG TGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGCAGAAGGTGGTTATGAAGAAGTTGATCTT GTTTTGCCAGGCACTGGAAG
Transcript length: 220 Transcript exons: 28183133-28183217,28184761-28184895 GAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGAT AGTCTAAAGGAGCTTTCTTCATTCAAAGGGATTTCTACTAGTTGCTGCTGATGAGCCAGGTCCA GCAGTACGTGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGCAGAAGGTGGTTATGAAGAAG TTGATCTTGTTTTGCCAGGCACTGGAAG
Transcript length: 232 Transcript exons: 28183133-28183232,28184764-28184895 GAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGAT AGTCTAAAGGAGCTTTCTTCACCTGGGAAAAGTGGCAAAGGGATTTCTACTAGTTGCTGCTGAT GAGCCAGGTCCAGCAGTACGTGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGCAGAAGGTG GTTATGAAGAAGTTGATCTTGTTTTGCCAGGCACTGGAAG
Transcript length: 816 Transcript exons: 28183133-28183298,28183448-28183585,28183673-28183853,28 184371-28184532,28184727-28184895 GAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGAT AGTCTAAAGGAGCTTTCTTCACCTGGGAAAAGTGGCAGCATTTTCTATCTTTCTCAAGATGAAC GTTTTGTTATAAAAACATTGAGGAAAACTGAGCTGAAGATTGGTTTGATGTAATACGTGCTGCA GATACTATTGAAGATGCTTCCAAAGTATTACAATCATGTCAAAGCTTATGATAATACGCTCATT ACAAAATTCTTTGGCGTGCACAGGATTACTCTGAAACCTGGAAGAAAGGTCCGTTTTGTTGTCA TGGGAAATATGTTTTGTACTGAACTGCGAATTCATCGTAAGTATGACTTAAAGGGCTCTACACA AGGCCGATCAACAAAGAAGCAAAATATAAATGAGAACACAACACTAAAGGACCTTGACCTATCA TATGTTTTTCACGTGGATAAACCATGGAGGGAGGCACTTTTCAGGCAGATAGCTCTTGATTGTA TGTTCCTGGAATCCCAATCTATAATTGACTATAGCATGCTATTGGGAATCCATTTCCGAGCTCC CAATCACCTGAAGCGTATCACATCATGTCAGAACGCTCTTGAAAGTACTGGAATTTCAGCTGAA ACGGAATGTAGTGTTGCACTGCATCATGAGGAGACAATTTCTTCAAAGGGATTTCTACTAGTTG CTGCTGATGAGCCAGGTCCAGCAGTACGTGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGC AGAAGGTGGTTATGAAGAAGTTGATCTTGTTTTGCCAGGCACTGGAAG
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Genomic sequence |
GAATCTTCGAGAAATGTTTCATATCGATGCTGCAGATTACATGATGTCTATATGTGGTGGTGAT AGTCTAAAGGAGCTTTCTTCACCTGGGAAAAGTGGCAGCATTTTCTATCTTTCTCAAGATGAAC GTTTTGTTATAAAAACATTGAGGAAAACTGAGCTGAAGGTATGACCCACCCTCAATTTTTTTCT TGCAATAACAATAGTGTTATTTGTTAATTAAAAATGACTAAAACTGAGCTTTACAAGAACAACA AAGATTTGTGCTAAAAACCGTGTATATCCTTGTTAAGTGATAAGATATGCCTACTGCAGATTGG TTTGATGTAATACGTGCTGCAGATACTATTGAAGATGCTTCCAAAGTATTACAATCATGTCAAA GCTTATGATAATACGCTCATTACAAAATTCTTTGGCGTGCACAGGATTACTCTGAAACCTGGAA GAAAGGTACATTATCATATCATACTGTTGTGTTGAATGTTGTTGTCTATTTGTACACATTTGCT ATATTAATTCTATGTATGGTGTTAATAGGTCCGTTTTGTTGTCATGGGAAATATGTTTTGTACT GAACTGCGAATTCATCGTAAGTATGACTTAAAGGGCTCTACACAAGGCCGATCAACAAAGAAGC AAAATATAAATGAGAACACAACACTAAAGGACCTTGACCTATCATATGTTTTTCACGTGGATAA ACCATGGAGGGAGGCACTTTTCAGGCAAATTGCTACTTTCTTGCTCCTCTTTTTTCTGAACATC TTACTGTCGTCTTTCATGGTTTTGTCTATATTGGCTTGAAGTCCAGGTTCCATAACTTACCGTT TATGATGTTACTTCTGGAGATTGTGTTCACTGGGTAGTCCCTTCTGGAAAATTAAAAAGAACAG TAGATTTAAATGACTTGTGCAGATTCCTGCTTCAGTCCCATGATTGGTGGACATCAAAATTATT TTCTACTATTTTGATATTGATTCTTATCCTATTCTTGAGATCTGAAGAATACTTAAGATGGACA ATTTTTATTTATACTATAGCAATAAATAGATTTTTTTAAATATAAACAACTAGATTAAAGAGGC AAACCAGATTTTAAGCAGTGTCCGACCATGCATACAAGAGATTGAATTCCAGCTGTCTAGTTCA GTTTTGCATATTACTGCTCCATTTCTGCTGTGCTATTTTTCTTAACATGGTTGACGATGATATC TTGAGAGCCAACAGTTGTACTATTTTCAGGCAGATAGCTCTTGATTGTATGTTCCTGGAATCCC AATCTATAATTGACTATAGCATGCTATTGGGAATCCATTTCCGAGCTCCCAATCACCTGAAGCG TATCACATCATGTCAGAACGCTCTTGAAAGTACTGGAATTTCAGCTGAAACGGAATGTACGTAC TAAACCTTAAGTACATCTGAGTTCTCTTTATTATATTCCTCTGAAAATTTGTCCTTTTACTAAA TCTGAAGTCAGGACTACACCAGATTCTTTATATCATTACATCAACCAATTGCCTATCTTCAGCT TTTGACTTCCATTTGTTGCCTAATGGTAATATCTTAGTCTTTTTTTCACCTTAATCAGGTAGTG TTGCACTGCATCATGAGGAGACAATTTCTTCAAAGGGATTTCTACTAGTTGCTGCTGATGAGCC AGGTCCAGCAGTACGTGGTTCGCACATAAGAGGAAGCATGGTTAGGGCAGCAGAAGGTGGTTAT GAAGAAGTTGATCTTGTTTTGCCAGGCACTGGAAG |