Detail information of BGIOSGA030331_circ_g.7


General Information
CircRNA Name BGIOSGA030331_circ_g.7
ID in PlantcircBase osi_circ_001024
Alias NA
Organism Oryza sativa ssp. indica
Position chr9: 2710426-2710737  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   i-circRNA
Identification method DCC
Parent gene BGIOSGA030331
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA030331_circ_g.1 BGIOSGA030331_circ_g.2 BGIOSGA030331_circ_g.3 BGIOSGA030331_circ_g.4 BGIOSGA030331_circ_g.5 BGIOSGA030331_circ_g.6 BGIOSGA030331_circ_g.8 BGIOSGA030331_circ_g.9
Support reads NA
Tissues leaf
Exon boundary   NA-NA
Splicing signals   GA-CG
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   AGTGAAAGTTTTTTACCTGTAGATGGAAAGCATTTGCAAAGTAACAAACTTGCCGCATGCACAC
CTTAATGATAATTTCAAAAGGAAAATATTTATGAGAaaacaagtcaaacaaaacaatggcaaaa
caaagtcaaaaatcatatgtagtattgaacccggttacactcgcttcatgtgtcatcacacgaa
gaatcctt
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence AAACAAGTCAAACAAAACAATGGCAAAACAAAGTCAAAAATCATATGTAGTATTGAACCCGGTT
ACACTCGCTTCATGTGTCATCACACGAAGAATCCTTTATGTACATCTTTCCATAGTCTCACAAA
TCGATCGGGTGGCTATTCCATAAGTTGACACGTGTATTTTGCTAAACGTCATCGACCAAAGATT
GAAATTTTGATTGTTCAATTAGTGAAAGTTTTTTACCTGTAGATGGAAAGCATTTGCAAAGTAA
CAAACTTGCCGCATGCACACCTTAATGATAATTTCAAAAGGAAAATATTTATGAGA
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Guria et al., 2019