Plant Circular RNA Database

Detail information of Os02g0202250_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os02g0202250_circ_g.6
					
						ID in PlantcircBase
						osa_circ_013718
					
						Alias
						Os_ciR8335
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 5716438-5719654  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os02g0202250						
					
						Parent gene annotation
						
							Hypothetical conserved gene. (Os02t0202250-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os02g0202250_circ_g.2 Os02g0202250_circ_g.3 Os02g0202250_circ_g.4 Os02g0202250_circ_g.5 Os02g0202250_circ_g.7 Os02g0202250_circ_g.8 Os02g0202250_circ_g.9 Os02g0202250_circ_g.10 Os02g0202250_circ_igg.1 						
					
						Support reads
						2/1
					
						Tissues
						root/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0202250-01:11

General Information
CircRNA Name	Os02g0202250_circ_g.6
ID in PlantcircBase	osa_circ_013718
Alias	Os_ciR8335
Organism	Oryza sativa
Position	chr2: 5716438-5719654 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os02g0202250
Parent gene annotation	Hypothetical conserved gene. (Os02t0202250-01)
Parent gene strand	-
Alternative splicing	Os02g0202250_circ_g.2 Os02g0202250_circ_g.3 Os02g0202250_circ_g.4 Os02g0202250_circ_g.5 Os02g0202250_circ_g.7 Os02g0202250_circ_g.8 Os02g0202250_circ_g.9 Os02g0202250_circ_g.10 Os02g0202250_circ_igg.1
Support reads	2/1
Tissues	root/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0202250-01:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGCAGACCTTTGATTCAAGTCTCAGGTTAGAAAGCATCTGGGGGTATTTAATGGAAGTGTCCGG
ACATCTGAACTGGACAACTTCAAGCAAATCCAAAACctcaagaaaatcagcggagtccacaagt
gaggtgaaagatgtgactattctaagtatcggtgcagtaagtgatctcctcttgtcaatttctc
cagctcgc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1368
Transcript exons: 5716438-5716572,5716650-5716820,5717545-5717709,5718165-
5718242,5718313-5718445,5718551-5718741,5718842-5718914,
5719001-5719056,5719142-5719300,5719383-5719496,5719562-
5719654
CTCAAGAAAATCAGCGGAGTCCACAAGTGAGGTGAAAGATGTGACTATTCTAAGTATCGGTGCA
GTAAGTGATCTCCTCTTGTCAATTTCTCCAGCTCGCTCTTTCACTACATTGGAGTTGAGCCTTG
AATTTGCCTTTTTCTGCGAACCCATCAGGTTGCACGACGAAAGATTATGTAGAGCACCCATGGA
CAACAGAATCTGGGAGCCATGTTTCCCATAGTGGTGACTGATTCTCAGAAGTAATGACAATTGA
GCATCAATAGTGCAAAATCGCTGTGAAGACTCTGATGAGAATGATGCTTCCTTAGACAAGTAGT
TGTTAACATCACTTAGACATGATCTGAGAATTCCTCGACTCTGAATTTGGTTCAAAAAATACTT
GTCATGGTCAATACTAATCAGTGAATCAAGAACGTAGAATGAAATTGCTTTCCCTGCTTCACTT
CCATGGATCGCATCCTTGGCAACCAAATCAATAACTGCTTGAGCTTCCTTCCTTATGATAGAGA
AGTTGCTGCGTGCTAATTCATTTTGTTCCTTGAGAACCTTTTGAAGACCAAGTTCATCATCATC
TCCCTCTTGTTCTTCAAGTAGTAAGAACCGAAGAACTGGTGGAGGGACATCAGAGTCAAGGGTG
CTACGGCAGTACTGAAAATAACTTAACAGTAATGCATATTGGCGTCTTCTCAAGGTCTCAGAAG
ATTCATTTCTTAGTATTGCCATCGTGAGTTTGAACAATAATGAAGTGCAGGCTGCATTTGACAA
CTGCTTTGCTGAAATGATGTCAAGGCAAGTAACTGCATCAGAATCGGCACCGGTTGGGCATATG
AATCTTTCATCCCGCAGTTTCGCCATACAAGTCAATGCCACATTGGTTAAAATATATGCCATTT
TCACTGAACAATCTGGAGATGTTGTGGCACTTAATGAAGCGTCAAGGAGCTCAAACAATAAATG
AGAACGATCTTCAAGTAATGACATCCTTCTAGATACTGCTATTTCAACAATTTGAGACCAGCCA
GTCAACATGTGAAGCTGGGCTGCTTGTTCTTCAAGATTTTTGTTATATCTCCAGGCCCATTTCA
GCATCTGATGGAATGATTCTTTTAGCTCGCTTTTCTCAGATTCACTTAATTGTGGGTTCAATAA
CTGAGACATCTGGAGAAGTTTTTCATGAAATGCATCAAGATCAATCAATCTATCGCCTCGCTCT
GAATAATAATATACACCACCAAATTCAGATGTCGCGGAATTCCTTAGGATCTCTTCAATCTTTG
ATTCAAGTCTCAGGTTAGAAAGCATCTGGGGGTATTTAATGGAAGTGTCCGGACATCTGAACTG
GACAACTTCAAGCAAATCCAAAAC
						
					

						Genomic sequence
						
							CTCAAGAAAATCAGCGGAGTCCACAAGTGAGGTGAAAGATGTGACTATTCTAAGTATCGGTGCA
GTAAGTGATCTCCTCTTGTCAATTTCTCCAGCTCGCTCTTTCACTACATTGGAGTTGAGCCTTG
AATTTGCCTAAAACATAAAGATATTGTAAGTATTTTTGAAGAGAGGATAAGCACTCACACTGGT
AACAGAGAGACAGAGTCAACCTTTTTCTGCGAACCCATCAGGTTGCACGACGAAAGATTATGTA
GAGCACCCATGGACAACAGAATCTGGGAGCCATGTTTCCCATAGTGGTGACTGATTCTCAGAAG
TAATGACAATTGAGCATCAATAGTGCAAAATCGCTGTGAAGACTCTGATGAGAATGATGCTTCC
TAATAAAAATAAAAAAGAAAGTCAATGACAAATGGCAAAGGTATAAACGCAAGAAAGAGGACTG
GTAGAATTAATACACTCATTGATATGCTAACTGATAGTACAAAATTACTGCAAATATGGAAACA
TAAAAGAACAGATTATCACAACAATCTTACTGTGGAGTACCGTCAACCGTCCACCCACATAACT
ACATATTCAGCACGTGTATTACATGAAAATTAAATGGAAAGATTCATAAAATGATTGTGTGCAG
TCTTTCAGGAAAAAAAAAAGGAGCATAACCAAACTTTTTAATTTTCAGAAGAGGTCAACTGGAA
ACCATCCTTGTCGCCTTGAAGCAACACTGATGGCGTAACAATACTAGCCAATGGGCCAGGCTTT
GATGATTTAGCGTTGATCATCCAATAATACCCAGAAAAACACTGAGCAATTTCACCTTTAAATA
CCCCCCATAACTTTGGCAGTACAAAGCATCCATCAATATCCAGACCACTAAACAATTTCATCTT
AAATTCCTAACCTCATACTTTGCACAAAAATGGAAGTTCTCTATAGAGGTCTACAAGCAGAGCC
ACAGCTCATTTTCAAGTTTTTTTTTTTTGGCAGAGACATTTTCAAGAATATGTAAAAATGTGAT
TTGCATGACCATGACAAAACAATGCCTTAAAACTATAACAGCAGATTTCTTGGGAAGAAGTAAA
AGGGAAATGAAGTCTAGACCTTAGACAAGTAGTTGTTAACATCACTTAGACATGATCTGAGAAT
TCCTCGACTCTGAATTTGGTTCAAAAAATACTTGTCATGGTCAATACTAATCAGTGAATCAAGA
ACGTAGAATGAAATTGCTTTCCCTGCTTCACTTCCATGGATCGCATCCTTGGCAACCTGTGATG
GAAACAAAATTGATCTCATGTTTGAGTTATAACTGTAGCAATTTCATAGAAAGCAATAATCTCC
ATTTCAAAATTCATATTAGATCTAGGTTTATGGGGTAACATGAGATCAAATCACACCATTGCAA
TTTCATATTTTTCAATGGCGTGTTTTGAGCCTTGCACGTGTAGGTGGATAATTGATCTAATGTT
CATATACAAATTTAAGATTTGAGGAAAACTTTTTGCATTTTGTTTTGACTAAATGTTTGCACAA
GTGCATAAGTAGCTGGATAATCTGTCTCTGATCATATACTCAATTTTAAATTTTAGGATAATTA
CTCTTATGTTGCAATTTATGTTGTACCCTCAAGTATATTCACATAGACATGCAACACCGCTGCT
ATAAACATAAGCATTGTGCAAAACATTTCAACTATTTTTTACATAAATAGAAGAATGACATACC
AAATCAATAACTGCTTGAGCTTCCTTCCTTATGATAGAGAAGTTGCTGCGTGCTAATTCATTTT
GTTCCTTGAGAACCTTTAGAAAGAAAAGGGTAAGGAAAAGGAAATATTCCCATCAAGACACAAA
GATAATTAATAGAAAGGACCTTTTGAAGACCAAGTTCATCATCATCTCCCTCTTGTTCTTCAAG
TAGTAAGAACCGAAGAACTGGTGGAGGGACATCAGAGTCAAGGGTGCTACGGCAGTACTGAAAA
TAACTTAACAGTAATGCATATTGGCTGCAAAAGAGAATTTAAAGTCAGCATATATTTTGTATGA
AAGAGAACAACGAATGGAACAGAAATGTTTTTAATGATCATAGTCACTAATGATAGGGAAGTTA
CCGTCTTCTCAAGGTCTCAGAAGATTCATTTCTTAGTATTGCCATCGTGAGTTTGAACAATAAT
GAAGTGCAGGCTGCATTTGACAACTGCTTTGCTGAAATGATGTCAAGGCAAGTAACTGCATCAG
AATCGGCACCGGTTGGGCATATGAATCTTTCATCCCGCAGTTTCGCCATACAAGTCAATGCCAC
CTTGAAAACATCAACATGCATAAAATTACAAGTTTGCAGTAGGCGAGGAACTTTATTAAGAGGT
TAACACTTGATACAAGCCGATAAACAACAAACTTACATTGGTTAAAATATATGCCATTTTCACT
GAACAATCTGGAGATGTTGTGGCACTTAATGAAGCGTCAAGGAGCCTGCAGCATGCAATATGCA
ATCAGTAAAGCTGGTACATTTGTGACAGTAAGAGTTTGTATTCTTAGAGAAGGGAGACAACACT
CACTCAAACAATAAATGAGAACGATCTTCAAGTAATGACATCCTTCTAGATACTGCTATCTGTA
ATTAGAGAAAAATAGCAGCGATCTACATAAAAATTCGCACCCTAAGAAAAGCTAAGCAGACAAA
CAAACAAAAGACTAACTTCAACAATTTGAGACCAGCCAGTCAACATGTGAAGCTGGGCTGCTTG
TTCTTCAAGATTTTTGTTATATCTCCAGGCCCATTTCAGCATCTGATGGAATGATTCTTTTAGC
TCGCTTTTCTCAGATTCACTTAATTGTGGGTTCAATAACTGAGACATCTGTAATAAAAGAAGCA
ATCCATAAAAAAAACCATAGGAAACATAAAAGTGTAATAACAACGAATAAGGCTGAAAAAATGA
CCTGGAGAAGTTTTTCATGAAATGCATCAAGATCAATCAATCTATCGCCTCGCTCTGAATAATA
ATATACACCACCAAATTCAGATGTCGCGGAATTCCTTAGGATCTCTTCAATCTATTAGCAGAAA
GAATCAGATGATAACTAATCGAACTTAAAAAGTTGATGTTTAAAGGGCAGACCTTTGATTCAAG
TCTCAGGTTAGAAAGCATCTGGGGGTATTTAATGGAAGTGTCCGGACATCTGAACTGGACAACT
TCAAGCAAATCCAAAAC
						
					

			
		

Sequences
Splice junction sequence	GGCAGACCTTTGATTCAAGTCTCAGGTTAGAAAGCATCTGGGGGTATTTAATGGAAGTGTCCGG ACATCTGAACTGGACAACTTCAAGCAAATCCAAAACctcaagaaaatcagcggagtccacaagt gaggtgaaagatgtgactattctaagtatcggtgcagtaagtgatctcctcttgtcaatttctc cagctcgc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1368 Transcript exons: 5716438-5716572,5716650-5716820,5717545-5717709,5718165- 5718242,5718313-5718445,5718551-5718741,5718842-5718914, 5719001-5719056,5719142-5719300,5719383-5719496,5719562- 5719654 CTCAAGAAAATCAGCGGAGTCCACAAGTGAGGTGAAAGATGTGACTATTCTAAGTATCGGTGCA GTAAGTGATCTCCTCTTGTCAATTTCTCCAGCTCGCTCTTTCACTACATTGGAGTTGAGCCTTG AATTTGCCTTTTTCTGCGAACCCATCAGGTTGCACGACGAAAGATTATGTAGAGCACCCATGGA CAACAGAATCTGGGAGCCATGTTTCCCATAGTGGTGACTGATTCTCAGAAGTAATGACAATTGA GCATCAATAGTGCAAAATCGCTGTGAAGACTCTGATGAGAATGATGCTTCCTTAGACAAGTAGT TGTTAACATCACTTAGACATGATCTGAGAATTCCTCGACTCTGAATTTGGTTCAAAAAATACTT GTCATGGTCAATACTAATCAGTGAATCAAGAACGTAGAATGAAATTGCTTTCCCTGCTTCACTT CCATGGATCGCATCCTTGGCAACCAAATCAATAACTGCTTGAGCTTCCTTCCTTATGATAGAGA AGTTGCTGCGTGCTAATTCATTTTGTTCCTTGAGAACCTTTTGAAGACCAAGTTCATCATCATC TCCCTCTTGTTCTTCAAGTAGTAAGAACCGAAGAACTGGTGGAGGGACATCAGAGTCAAGGGTG CTACGGCAGTACTGAAAATAACTTAACAGTAATGCATATTGGCGTCTTCTCAAGGTCTCAGAAG ATTCATTTCTTAGTATTGCCATCGTGAGTTTGAACAATAATGAAGTGCAGGCTGCATTTGACAA CTGCTTTGCTGAAATGATGTCAAGGCAAGTAACTGCATCAGAATCGGCACCGGTTGGGCATATG AATCTTTCATCCCGCAGTTTCGCCATACAAGTCAATGCCACATTGGTTAAAATATATGCCATTT TCACTGAACAATCTGGAGATGTTGTGGCACTTAATGAAGCGTCAAGGAGCTCAAACAATAAATG AGAACGATCTTCAAGTAATGACATCCTTCTAGATACTGCTATTTCAACAATTTGAGACCAGCCA GTCAACATGTGAAGCTGGGCTGCTTGTTCTTCAAGATTTTTGTTATATCTCCAGGCCCATTTCA GCATCTGATGGAATGATTCTTTTAGCTCGCTTTTCTCAGATTCACTTAATTGTGGGTTCAATAA CTGAGACATCTGGAGAAGTTTTTCATGAAATGCATCAAGATCAATCAATCTATCGCCTCGCTCT GAATAATAATATACACCACCAAATTCAGATGTCGCGGAATTCCTTAGGATCTCTTCAATCTTTG ATTCAAGTCTCAGGTTAGAAAGCATCTGGGGGTATTTAATGGAAGTGTCCGGACATCTGAACTG GACAACTTCAAGCAAATCCAAAAC
Genomic sequence	CTCAAGAAAATCAGCGGAGTCCACAAGTGAGGTGAAAGATGTGACTATTCTAAGTATCGGTGCA GTAAGTGATCTCCTCTTGTCAATTTCTCCAGCTCGCTCTTTCACTACATTGGAGTTGAGCCTTG AATTTGCCTAAAACATAAAGATATTGTAAGTATTTTTGAAGAGAGGATAAGCACTCACACTGGT AACAGAGAGACAGAGTCAACCTTTTTCTGCGAACCCATCAGGTTGCACGACGAAAGATTATGTA GAGCACCCATGGACAACAGAATCTGGGAGCCATGTTTCCCATAGTGGTGACTGATTCTCAGAAG TAATGACAATTGAGCATCAATAGTGCAAAATCGCTGTGAAGACTCTGATGAGAATGATGCTTCC TAATAAAAATAAAAAAGAAAGTCAATGACAAATGGCAAAGGTATAAACGCAAGAAAGAGGACTG GTAGAATTAATACACTCATTGATATGCTAACTGATAGTACAAAATTACTGCAAATATGGAAACA TAAAAGAACAGATTATCACAACAATCTTACTGTGGAGTACCGTCAACCGTCCACCCACATAACT ACATATTCAGCACGTGTATTACATGAAAATTAAATGGAAAGATTCATAAAATGATTGTGTGCAG TCTTTCAGGAAAAAAAAAAGGAGCATAACCAAACTTTTTAATTTTCAGAAGAGGTCAACTGGAA ACCATCCTTGTCGCCTTGAAGCAACACTGATGGCGTAACAATACTAGCCAATGGGCCAGGCTTT GATGATTTAGCGTTGATCATCCAATAATACCCAGAAAAACACTGAGCAATTTCACCTTTAAATA CCCCCCATAACTTTGGCAGTACAAAGCATCCATCAATATCCAGACCACTAAACAATTTCATCTT AAATTCCTAACCTCATACTTTGCACAAAAATGGAAGTTCTCTATAGAGGTCTACAAGCAGAGCC ACAGCTCATTTTCAAGTTTTTTTTTTTTGGCAGAGACATTTTCAAGAATATGTAAAAATGTGAT TTGCATGACCATGACAAAACAATGCCTTAAAACTATAACAGCAGATTTCTTGGGAAGAAGTAAA AGGGAAATGAAGTCTAGACCTTAGACAAGTAGTTGTTAACATCACTTAGACATGATCTGAGAAT TCCTCGACTCTGAATTTGGTTCAAAAAATACTTGTCATGGTCAATACTAATCAGTGAATCAAGA ACGTAGAATGAAATTGCTTTCCCTGCTTCACTTCCATGGATCGCATCCTTGGCAACCTGTGATG GAAACAAAATTGATCTCATGTTTGAGTTATAACTGTAGCAATTTCATAGAAAGCAATAATCTCC ATTTCAAAATTCATATTAGATCTAGGTTTATGGGGTAACATGAGATCAAATCACACCATTGCAA TTTCATATTTTTCAATGGCGTGTTTTGAGCCTTGCACGTGTAGGTGGATAATTGATCTAATGTT CATATACAAATTTAAGATTTGAGGAAAACTTTTTGCATTTTGTTTTGACTAAATGTTTGCACAA GTGCATAAGTAGCTGGATAATCTGTCTCTGATCATATACTCAATTTTAAATTTTAGGATAATTA CTCTTATGTTGCAATTTATGTTGTACCCTCAAGTATATTCACATAGACATGCAACACCGCTGCT ATAAACATAAGCATTGTGCAAAACATTTCAACTATTTTTTACATAAATAGAAGAATGACATACC AAATCAATAACTGCTTGAGCTTCCTTCCTTATGATAGAGAAGTTGCTGCGTGCTAATTCATTTT GTTCCTTGAGAACCTTTAGAAAGAAAAGGGTAAGGAAAAGGAAATATTCCCATCAAGACACAAA GATAATTAATAGAAAGGACCTTTTGAAGACCAAGTTCATCATCATCTCCCTCTTGTTCTTCAAG TAGTAAGAACCGAAGAACTGGTGGAGGGACATCAGAGTCAAGGGTGCTACGGCAGTACTGAAAA TAACTTAACAGTAATGCATATTGGCTGCAAAAGAGAATTTAAAGTCAGCATATATTTTGTATGA AAGAGAACAACGAATGGAACAGAAATGTTTTTAATGATCATAGTCACTAATGATAGGGAAGTTA CCGTCTTCTCAAGGTCTCAGAAGATTCATTTCTTAGTATTGCCATCGTGAGTTTGAACAATAAT GAAGTGCAGGCTGCATTTGACAACTGCTTTGCTGAAATGATGTCAAGGCAAGTAACTGCATCAG AATCGGCACCGGTTGGGCATATGAATCTTTCATCCCGCAGTTTCGCCATACAAGTCAATGCCAC CTTGAAAACATCAACATGCATAAAATTACAAGTTTGCAGTAGGCGAGGAACTTTATTAAGAGGT TAACACTTGATACAAGCCGATAAACAACAAACTTACATTGGTTAAAATATATGCCATTTTCACT GAACAATCTGGAGATGTTGTGGCACTTAATGAAGCGTCAAGGAGCCTGCAGCATGCAATATGCA ATCAGTAAAGCTGGTACATTTGTGACAGTAAGAGTTTGTATTCTTAGAGAAGGGAGACAACACT CACTCAAACAATAAATGAGAACGATCTTCAAGTAATGACATCCTTCTAGATACTGCTATCTGTA ATTAGAGAAAAATAGCAGCGATCTACATAAAAATTCGCACCCTAAGAAAAGCTAAGCAGACAAA CAAACAAAAGACTAACTTCAACAATTTGAGACCAGCCAGTCAACATGTGAAGCTGGGCTGCTTG TTCTTCAAGATTTTTGTTATATCTCCAGGCCCATTTCAGCATCTGATGGAATGATTCTTTTAGC TCGCTTTTCTCAGATTCACTTAATTGTGGGTTCAATAACTGAGACATCTGTAATAAAAGAAGCA ATCCATAAAAAAAACCATAGGAAACATAAAAGTGTAATAACAACGAATAAGGCTGAAAAAATGA CCTGGAGAAGTTTTTCATGAAATGCATCAAGATCAATCAATCTATCGCCTCGCTCTGAATAATA ATATACACCACCAAATTCAGATGTCGCGGAATTCCTTAGGATCTCTTCAATCTATTAGCAGAAA GAATCAGATGATAACTAATCGAACTTAAAAAGTTGATGTTTAAAGGGCAGACCTTTGATTCAAG TCTCAGGTTAGAAAGCATCTGGGGGTATTTAATGGAAGTGTCCGGACATCTGAACTGGACAACT TCAAGCAAATCCAAAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_003734* osi_circ_012659 						
					
						PMCS
						0.334044216

Conservation Information
Conserved circRNAs	osi_circ_003734* osi_circ_012659
PMCS	0.334044216

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							5719606-5716734(+)
5719593-5716440(-)
						
					

						Potential amino acid sequence
						
							MEVSGHLNWTTSSKSKTSRKSAESTSEVKDVTILSIGAVSDLLLSISPARSFTTLELSLEFAFF
CEPIRLHDERLCRAPMDNRIWEPCFP*(+)
MLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLDAFHEKLLQMSQLLNPQLSESEKSE
LKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAVSRRMSLLEDRSHLLFELLDASLSA
TTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDAVTCLDIISAKQLSNAACTSLLFKL
TMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPPVLRFLLLEEQEGDDDELGLQKVLKE
QNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGKAISFYVLDSLISIDHDKYFLNQIQSRGIL
RSCLSDVNNYLSKEASFSSESSQRFCTIDAQLSLLLRISHHYGKHGSQILLSMGALHNLSSCNL
MGSQKKANSRLNSNVVKERAGEIDKRRSLTAPILRIVTSFTSLVDSADFLEVLDLLEVVQFRCP
DTSIKYPQMLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLDAFHEKLLQMSQLLNPQ
LSESEKSELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAVSRRMSLLEDRSHLLFE
LLDASLSATTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDAVTCLDIISAKQLSNAA
CTSLLFKLTMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPPVLRFLLLEEQEGDDDEL
GLQKVLKEQNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGKAISFYVLDSLISIDHDKYFLN
QIQSRGILRSCLSDVNNYLSKEASFSSESSQRFCTIDAQLSLLLRISHHYGKHGSQILLSMGAL
HNLSSCNLMGSQKKANSRLNSNVVKERAGEIDKRRSLTAPILRIVTSFTSLVDSADFLEVLDLL
EVVQFRCPDTSIKYPQMLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLDAFHEKLLQ
MSQLLNPQLSESEKSELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAVSRRMSLLE
DRSHLLFELLDASLSATTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDAVTCLDIIS
AKQLSNAACTSLLFKLTMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPPVLRFLLLEE
QEGDDDELGLQKVLKEQNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGKAISFYVLDSLISI
DHDKYFLNQIQSRGILRSCLSDVNNYLSKEASFSSESSQRFCTIDAQLSLLLRISHHYGKHGSQ
ILLSMGALHNLSSCNLMGSQKKANSRLNSNVVKERAGEIDKRRSLTAPILRIVTSFTSLVDSAD
FLEVLDLLEVVQFRCPDTSIKYPQMLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLD
AFHEKLLQMSQLLNPQLSESEKSELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAV
SRRMSLLEDRSHLLFELLDASLSATTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDA
VTCLDIISAKQLSNAACTSLLFKLTMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPPV
LRFLLLEEQEGDDDELGLQKVLKEQNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGKAISFY
VLDSLISIDHDKYFLNQIQSRGILRSCLSDVNNYLSKEASFSSESSQRFCTIDAQLSLLLRISH
HYGKHGSQILLSMGALHNLSSCNLMGSQKKANSRLNSNVVKERAGEIDKRRSLTAPILRIVTSF
TSLVDSADFLE(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	5719606-5716734(+) 5719593-5716440(-)
Potential amino acid sequence	MEVSGHLNWTTSSKSKTSRKSAESTSEVKDVTILSIGAVSDLLLSISPARSFTTLELSLEFAFF CEPIRLHDERLCRAPMDNRIWEPCFP*(+) MLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLDAFHEKLLQMSQLLNPQLSESEKSE LKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAVSRRMSLLEDRSHLLFELLDASLSA TTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDAVTCLDIISAKQLSNAACTSLLFKL TMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPPVLRFLLLEEQEGDDDELGLQKVLKE QNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGKAISFYVLDSLISIDHDKYFLNQIQSRGIL RSCLSDVNNYLSKEASFSSESSQRFCTIDAQLSLLLRISHHYGKHGSQILLSMGALHNLSSCNL MGSQKKANSRLNSNVVKERAGEIDKRRSLTAPILRIVTSFTSLVDSADFLEVLDLLEVVQFRCP DTSIKYPQMLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLDAFHEKLLQMSQLLNPQ LSESEKSELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAVSRRMSLLEDRSHLLFE LLDASLSATTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDAVTCLDIISAKQLSNAA CTSLLFKLTMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPPVLRFLLLEEQEGDDDEL GLQKVLKEQNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGKAISFYVLDSLISIDHDKYFLN QIQSRGILRSCLSDVNNYLSKEASFSSESSQRFCTIDAQLSLLLRISHHYGKHGSQILLSMGAL HNLSSCNLMGSQKKANSRLNSNVVKERAGEIDKRRSLTAPILRIVTSFTSLVDSADFLEVLDLL EVVQFRCPDTSIKYPQMLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLDAFHEKLLQ MSQLLNPQLSESEKSELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAVSRRMSLLE DRSHLLFELLDASLSATTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDAVTCLDIIS AKQLSNAACTSLLFKLTMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPPVLRFLLLEE QEGDDDELGLQKVLKEQNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGKAISFYVLDSLISI DHDKYFLNQIQSRGILRSCLSDVNNYLSKEASFSSESSQRFCTIDAQLSLLLRISHHYGKHGSQ ILLSMGALHNLSSCNLMGSQKKANSRLNSNVVKERAGEIDKRRSLTAPILRIVTSFTSLVDSAD FLEVLDLLEVVQFRCPDTSIKYPQMLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLD AFHEKLLQMSQLLNPQLSESEKSELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAV SRRMSLLEDRSHLLFELLDASLSATTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDA VTCLDIISAKQLSNAACTSLLFKLTMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPPV LRFLLLEEQEGDDDELGLQKVLKEQNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGKAISFY VLDSLISIDHDKYFLNQIQSRGILRSCLSDVNNYLSKEASFSSESSQRFCTIDAQLSLLLRISH HYGKHGSQILLSMGALHNLSSCNLMGSQKKANSRLNSNVVKERAGEIDKRRSLTAPILRIVTSF TSLVDSADFLE(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os02g0202250_circ_g.6

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