Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0498600_circ_g.8 |
ID in PlantcircBase | osa_circ_024426 |
Alias | NA |
Organism | Oryza sativa |
Position | chr4: 24917193-24917283 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | circRNA_finder |
Parent gene | Os04g0498650 |
Parent gene annotation |
Hypothetical gene. (Os04t0498650-00) |
Parent gene strand | - |
Alternative splicing | Os04g0498600_circ_g.7 Os04g0498600_circ_g.9 Os04g0498600_circ_g.10 Os04g0498600_circ_g.11 Os04g0498600_circ_g.12 Os04g0498600_circ_g.13 Os04g0498600_circ_g.14 Os04g0498600_circ_g.15 Os04g0498600_circ_g.16 |
Support reads | 2 |
Tissues | seed |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os04t0498600-02:1 Os04t0498600-01:1 Os04t0498650-00:1 Os04t0498600-02:1 Os04t0498600-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.108057692 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |