Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os11g0153700_circ_g.1 |
ID in PlantcircBase | osa_circ_008494 |
Alias | Os11circ00564 |
Organism | Oryza sativa |
Position | chr11: 2518444-2519759 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os11g0153700 |
Parent gene annotation |
Similar to Signal recognition particle 54 kDa protein, chloropla st precursor (SRP54) (54 chloroplast protein) (54CP) (FFC). (Os1 1t0153700-01) |
Parent gene strand | + |
Alternative splicing | Os11g0153700_circ_g.2 Os11g0153700_circ_g.3 Os11g0153700_circ_g.4 |
Support reads | 5 |
Tissues | leaf and panicle |
Exon boundary | No-Yes |
Splicing signals | GT-AG |
Number of exons covered | Os11t0153700-01:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.152172739 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |