Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Os01g0104600_circ_g.1 |
| ID in PlantcircBase | osa_circ_000043 |
| Alias | NA |
| Organism | Oryza sativa |
| Position | chr1: 251691-256094 JBrowse» |
| Reference genome | IRGSP-1.0.38 |
| Type | ei-circRNA |
| Identification method | PcircRNA_finder |
| Parent gene | Os01g0104600 |
| Parent gene annotation |
Homolog of Arabidopsis DE-ETIOLATED1 (DET1), Modulation of the A BA signaling pathway and ABA biosynthesis, Regulation of chlorop hyll content (Os01t0104600-01);Similar to Light-mediated develop ment protein DET1 (Deetiolated1 homolog) (tDET1) (High pigmentat ion protein 2) (Protein dark green). (Os01t0104600-02) |
| Parent gene strand | - |
| Alternative splicing | Os01g0104600_circ_g.2 |
| Support reads | 25 |
| Tissues | seed |
| Exon boundary | No-No |
| Splicing signals | TA-GC |
| Number of exons covered | Os01t0104600-02:3 Os01t0104600-01:3 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.228504808 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chu et al., 2017 |