Plant Circular RNA Database

Detail information of Os01g0104600_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os01g0104600_circ_g.2
					
						ID in PlantcircBase
						osa_circ_000044
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 251695-256098  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder
					
						Parent gene
						
							Os01g0104600						
					
						Parent gene annotation
						
							Homolog of Arabidopsis DE-ETIOLATED1 (DET1), Modulation of the A
BA signaling pathway and ABA biosynthesis, Regulation of chlorop
hyll content (Os01t0104600-01);Similar to Light-mediated develop
ment protein DET1 (Deetiolated1 homolog) (tDET1) (High pigmentat
ion protein 2) (Protein dark green). (Os01t0104600-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os01g0104600_circ_g.1 						
					
						Support reads
						16
					
						Tissues
						seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0104600-02:3
Os01t0104600-01:3

General Information
CircRNA Name	Os01g0104600_circ_g.2
ID in PlantcircBase	osa_circ_000044
Alias	NA
Organism	Oryza sativa
Position	chr1: 251695-256098 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder
Parent gene	Os01g0104600
Parent gene annotation	Homolog of Arabidopsis DE-ETIOLATED1 (DET1), Modulation of the A BA signaling pathway and ABA biosynthesis, Regulation of chlorop hyll content (Os01t0104600-01);Similar to Light-mediated develop ment protein DET1 (Deetiolated1 homolog) (tDET1) (High pigmentat ion protein 2) (Protein dark green). (Os01t0104600-02)
Parent gene strand	-
Alternative splicing	Os01g0104600_circ_g.1
Support reads	16
Tissues	seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0104600-02:3 Os01t0104600-01:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATCATCAGTGAATTTACGAAATGAATAATCTGGGCAATCTATGTCACATATAGTGTAACTCGG
AACCAAGTTCTCATAGAACTGTCTAACAGTGTTAACcaaggtctgatcagattcctcattccat
gtcttgcgaaaaataaatgacaacaaccgttgcttgatgccaggaagaaaagaaacacctcgtg
cagcctgc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 750
Transcript exons: 251695-251790,255325-255553,255674-256098
CAAGGTCTGATCAGATTCCTCATTCCATGTCTTGCGAAAAATAAATGACAACAACCGTTGCTTG
ATGCCAGGAAGAAAAGAAACACCTCGTGCAGCCTGACCATGTGAATGGAGAAATAGCTCATCAT
CTTCCTGGCAAAATGCACCAATTTTGCGTACTTCAACAAGGTTGCCTGAATCTCGTATCTGTAG
GACATGAATTGTTTGATATCGAAGAGAGACAATGCATAGCAGGTCCTCATACAAGTAAGCTCCA
ATACTATGAGCCAGATTGATAAAATCATTGCGGAAAGCTTTCTCATCTAGTATTGCGCCATCGT
CTAGCCTGACAAGATAGAAAGTAATTTTCTCAATTGATGGTACCCCATGAATAGCACCCTCAGT
GGCACTTGAATCGTTGCTTTGTGCAGTTGATGTGGCAAATAAGCCAAACTGATGGCACTCCATG
TAAAGGAAAAAGTCCTTGCAGATGTATTCATTGCTAGATGCAAGTGAAATTGAGTAGAGCTGCT
TAAAGAAGCTGTCGAATTTCTTTGCTTTGGGTGGAAGATCATGAGAGTCGCATGGCTCATTGCA
TGAAAATGTTGGCCAGATGGGACGGTACACGATTAAATCTTGGTGGTTCCGGCTAAAAGCCACA
AGATAGTTGCCATCATCAGTGAATTTACGAAATGAATAATCTGGGCAATCTATGTCACATATAG
TGTAACTCGGAACCAAGTTCTCATAGAACTGTCTAACAGTGTTAAC
						
					

						Genomic sequence
						
							CAAGGTCTGATCAGATTCCTCATTCCATGTCTTGCGAAAAATAAATGACAACAACCGTTGCTTG
ATGCCAGGAAGAAAAGAAACACCTCGTGCAGCCTGCAGGCATCAAGTACATTGACAGTTTGTGA
TTCATACGTAGATTTGATTTAGATTTATCGTGCATAAGTTCATAACTAGAATAATATCAACTAT
TGTTGATCAAGAATAATAGATCATGGACATGAATATTTTCCTAGACTGAGAAGGCGCTTTTGTG
CAATAAAAATAGTGGGGGAAACAAGGAGCCAAAGTTAAAAAAAAATCCAAAGAACTAGTAGTAA
TGAATGAATGAATGAATGAACATGGTGGAAATAAAATTACGAGAAATATATTTCAAGCAACAAA
TGGGGAAGTGCATATCTGCTTCTCTATCACTAGTCTCCTGTAAGTTATACCGTTTACATAACAG
AAACAATATGAAAACAATAGAAGAATGTCATTAGCAAATAGATAATCAAATATGTCAGAACAAA
AGCACTCCTGGACAGATGCAGGCATACAATTTTCTTTTCTTTCTCTCTATTTTTAACATAGCAC
CAAAAATATTGCTTGCTACAGTCTAGAAGATCAATTCAGTCCAATAAATATTCTTGGTTATAGC
CTAATTTATTTTTCAGCAAAGAATGGGTGTTGAAATCAGTGGTTATTGACCTATTTGTTGTTTT
ATCTGGCAACCCATTAAAACTGGAATGATTACTCCTCTTTATATAATCTCCTGGTGATGCTCCA
GTAGCTCTCATATATTAGTTTACTTAAACGCCGTGGAAATGCTTGAGAATTAGAGCGCCACGTC
AGCGTATTTTTGCACAAAGGTCCCTGAACTTCCAGTTAATTATGTGCCAGTCCCAGCTACCCCA
CCGTCCGATCTTGTGCTACGATCGATCTGGGTCGTACATCTGTCCTACCGTGCCGGCGCTTCCA
CACCTGTGATATCGTCGGATCACAAACGGACGGCAGAGATTGCACCAAACCCTAGCCTCATTGT
CCGCTTCGCCCGCAGCCGCGCAAGCGCGCCGCCTCGCCTCCTCCTCCCTCATGCGCGCCGGCCC
GCTCCCTCGCTCTTCTCCTCCCCTCGCATACGCCGTCATCGCCGTTGTCGCCGCCGCCAACGTC
GCCGCCGCCGACATCACCGCAGCTGCCGCCACCGCGCTCTTCTAGCCGTCATTGCCACATCGGA
AGATCCAGCCACCCGAACGAGAGGTATGCTAGCGGCTGCCCTCTTTCTTTCTTTTTTTTCCTTA
CAGCGATATTCCTACTGAAGAAAGCAGAGGAGGGTGATCCCATTGTGCTACTGCTAGACCCAAT
GGAATTGAAGTGAGAAGGGAGCAATAGAGGAACTAGGGGAAAAGATGGGCAAAAGATTGTGCTA
CTCTGATGCAGTTTTCAGAGACTACATTATTTATTTATATTCAGACCACATTCCAATTTATGAG
GTAATTGGTTCATGCTTCATCCTAATTTCAATTATATGATTTTCTTTTCTTAGTATGCAATTTA
CATCTAGCTGATATTTGCAATCTTTGAAGTCCAAATCAGAGAATGTGAAAAACTGCAAAGTTGC
AGGTATCAAGTTTAAGGACAGAGGTAACTTCTGATAAGAAGTCTGTGTATTGCAGTTCGACTAT
AACTTGATCTGTCAACTTGCAGAGGGTTTTCACCCCATTTACATGGCAGATAATGCCATTCTTT
GTATATGGAAGTTGTAGAATTCAGCTCCTTAATCCAGTACTTTCATATTTGCTTTAGTTGTCAT
ATTAAATTTTCAAATCAACTAAGTTTTGGTTCATCATGTTTTTAATTTGCAGAATATTACAATC
ATGCAATGTTTATCTCATCGACAAACTGTTGAATGACCATCATTTTGGAAAATGAACAAGACAT
CTCACTTTCAGCAACTGCTGATGCTTGCATTTGAATTATATTGAGGTATCCAAACTTCCAGAGC
AATGTTCTATTCTATTTCAGCAAAATGATTTAGGCTTAATTCATCATGATGTCAAATGTCAAGT
ATATGCTCTGTCCCACCTATGAGAAAGCAACAACCTATCTGACAAAGTGACAGTTATAGTTTGT
AGGTCTTCCAATTTATATGTACAAGATACAAATGAAGAATATTCATAAATGATTGTGGGATAAG
TTCAGACCCACATGAAAGGTTCTGCAACGTGTTTTCAGTTTTGATTTTTTTTAAAGAGATCCTA
TGAGAAATTCTAGATGCGCTTCTTCATTCTATGATGGGTTGTCTATATACATTAGTTTTCCTTG
ATTACACATGAGCGCATGTACCACTAATATAGTTGCCATCGGCTCCATGTTCTTCCTATTTCTT
TACAAAATATCCTATTGTTATAGCAAGTGTACTTACTTTTTGGATAGGAGTTCATGAAAATTGT
TCTTTTGTATACAGCATCCATGATTTATATTTATGTCTTAGTTGTTCTTTATCTTGAGACAAGC
AAGGTGACAGATCCTTCTTGCAAAACAAAACTCCTACTTTTGTTGAGAGGGGCAACCCATTGTC
CTCAGCTCATGAAAAAAAATAATGAACGAAGCTATCAGTTGAAGAACCAAGCACACTAAGATGA
TAGAGGCTTATATGGTATATCTTGGATTGCATGACCACTTACCTGAGCAATAATTTCCTTCTCA
ATATGGAACGATAGCCATATTTCACTAACTACATGATCTGTTATTTTTCTACCACATATTAAGT
TTTCACTAGGTTAATTATTACAATGCAGTTTAGTTCTTTGTGATACAAATGAGGCATTTTAGTT
AAGTCGTATGGAAACACCATTTCTCCCTACTTCACAGCCATACATATTTTAGTTTTTTGAGTTA
GTCATGCTTCCCTTACCAACTTCTCTATATATTTTGTGGGCATATTTACCTTCTATTGTAAAAA
CTGTCTAGACCAATTCTCATGGATTGCTCTTATTATTATCATTGTAGATGGTGATAGGGATCAG
CAAGCGTGCAGTACATCTCAAGCACCTGCAAGCTGGTGGTTGGATCTTTACTGGCCATAGCTAC
TAATTCTTTTTTATGAAAAAAATTCCTCAATCAAATAAATCTCAAATATCAGATTATATCTGGT
CAGTGTAACTAATGTGTTATCCTGACTCTGAAGTCAATTTTGAATAATCTTGAATTGGATCAAT
GCAAAGATATCTTCTATTCTTTACCCTTTGCATTATCGAGGATTGGTGAACATGTTAAGTTCAG
ATGTTACGGTGATATCTATCTTTTGGGGGAAGCAAGATAAATTTATACCATATTTTACCTTAAT
GATGCAATTTAGTTTTTTTATTTACAATTTGATCATATTACAGAGCATGCTTGGATGGCAGAGC
AAAGAAAAGTACGAAGTATGGTGAAAGATGATTTTTGTTTTAAGTGCAAACAGTAATTGTTAGA
TCACACGCAGCGTAGCGCGTGCTTCTTTCTAGTTACTATTATTTGAACTATGAATGCCCATGGT
TCCAGTGCAATCAACACCAATTTGATTAGACAGGTAATACATGACCAGTACCAACTATGATGTA
AACTAAATATAGATCCAGCAATCTTGCCGTAGGGATCAGTAGGTACCTGACCATGTGAATGGAG
AAATAGCTCATCATCTTCCTGGCAAAATGCACCAATTTTGCGTACTTCAACAAGGTTGCCTGAA
TCTCGTATCTGTAGGACATGAATTGTTTGATATCGAAGAGAGACAATGCATAGCAGGTCCTCAT
ACAAGTAAGCTCCAATACTATGAGCCAGATTGATAAAATCATTGCGGAAAGCTTTCTCATCTAG
TATTGCGCCATCGTCTAGCCTGAACAAGAGAAATATAGAAGTCGAGAACCATTCAAACGAAAGG
AAAGGATGGTTATAATACATAGACATCATAACGGACAACTAAAAGTGCATTCCTAGCGAAACAA
GATGATTGTACCTGACAAGATAGAAAGTAATTTTCTCAATTGATGGTACCCCATGAATAGCACC
CTCAGTGGCACTTGAATCGTTGCTTTGTGCAGTTGATGTGGCAAATAAGCCAAACTGATGGCAC
TCCATGTAAAGGAAAAAGTCCTTGCAGATGTATTCATTGCTAGATGCAAGTGAAATTGAGTAGA
GCTGCTTAAAGAAGCTGTCGAATTTCTTTGCTTTGGGTGGAAGATCATGAGAGTCGCATGGCTC
ATTGCATGAAAATGTTGGCCAGATGGGACGGTACACGATTAAATCTTGGTGGTTCCGGCTAAAA
GCCACAAGATAGTTGCCATCATCAGTGAATTTACGAAATGAATAATCTGGGCAATCTATGTCAC
ATATAGTGTAACTCGGAACCAAGTTCTCATAGAACTGTCTAACAGTGTTAAC
						
					

			
		

Sequences
Splice junction sequence	CATCATCAGTGAATTTACGAAATGAATAATCTGGGCAATCTATGTCACATATAGTGTAACTCGG AACCAAGTTCTCATAGAACTGTCTAACAGTGTTAACcaaggtctgatcagattcctcattccat gtcttgcgaaaaataaatgacaacaaccgttgcttgatgccaggaagaaaagaaacacctcgtg cagcctgc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 750 Transcript exons: 251695-251790,255325-255553,255674-256098 CAAGGTCTGATCAGATTCCTCATTCCATGTCTTGCGAAAAATAAATGACAACAACCGTTGCTTG ATGCCAGGAAGAAAAGAAACACCTCGTGCAGCCTGACCATGTGAATGGAGAAATAGCTCATCAT CTTCCTGGCAAAATGCACCAATTTTGCGTACTTCAACAAGGTTGCCTGAATCTCGTATCTGTAG GACATGAATTGTTTGATATCGAAGAGAGACAATGCATAGCAGGTCCTCATACAAGTAAGCTCCA ATACTATGAGCCAGATTGATAAAATCATTGCGGAAAGCTTTCTCATCTAGTATTGCGCCATCGT CTAGCCTGACAAGATAGAAAGTAATTTTCTCAATTGATGGTACCCCATGAATAGCACCCTCAGT GGCACTTGAATCGTTGCTTTGTGCAGTTGATGTGGCAAATAAGCCAAACTGATGGCACTCCATG TAAAGGAAAAAGTCCTTGCAGATGTATTCATTGCTAGATGCAAGTGAAATTGAGTAGAGCTGCT TAAAGAAGCTGTCGAATTTCTTTGCTTTGGGTGGAAGATCATGAGAGTCGCATGGCTCATTGCA TGAAAATGTTGGCCAGATGGGACGGTACACGATTAAATCTTGGTGGTTCCGGCTAAAAGCCACA AGATAGTTGCCATCATCAGTGAATTTACGAAATGAATAATCTGGGCAATCTATGTCACATATAG TGTAACTCGGAACCAAGTTCTCATAGAACTGTCTAACAGTGTTAAC
Genomic sequence	CAAGGTCTGATCAGATTCCTCATTCCATGTCTTGCGAAAAATAAATGACAACAACCGTTGCTTG ATGCCAGGAAGAAAAGAAACACCTCGTGCAGCCTGCAGGCATCAAGTACATTGACAGTTTGTGA TTCATACGTAGATTTGATTTAGATTTATCGTGCATAAGTTCATAACTAGAATAATATCAACTAT TGTTGATCAAGAATAATAGATCATGGACATGAATATTTTCCTAGACTGAGAAGGCGCTTTTGTG CAATAAAAATAGTGGGGGAAACAAGGAGCCAAAGTTAAAAAAAAATCCAAAGAACTAGTAGTAA TGAATGAATGAATGAATGAACATGGTGGAAATAAAATTACGAGAAATATATTTCAAGCAACAAA TGGGGAAGTGCATATCTGCTTCTCTATCACTAGTCTCCTGTAAGTTATACCGTTTACATAACAG AAACAATATGAAAACAATAGAAGAATGTCATTAGCAAATAGATAATCAAATATGTCAGAACAAA AGCACTCCTGGACAGATGCAGGCATACAATTTTCTTTTCTTTCTCTCTATTTTTAACATAGCAC CAAAAATATTGCTTGCTACAGTCTAGAAGATCAATTCAGTCCAATAAATATTCTTGGTTATAGC CTAATTTATTTTTCAGCAAAGAATGGGTGTTGAAATCAGTGGTTATTGACCTATTTGTTGTTTT ATCTGGCAACCCATTAAAACTGGAATGATTACTCCTCTTTATATAATCTCCTGGTGATGCTCCA GTAGCTCTCATATATTAGTTTACTTAAACGCCGTGGAAATGCTTGAGAATTAGAGCGCCACGTC AGCGTATTTTTGCACAAAGGTCCCTGAACTTCCAGTTAATTATGTGCCAGTCCCAGCTACCCCA CCGTCCGATCTTGTGCTACGATCGATCTGGGTCGTACATCTGTCCTACCGTGCCGGCGCTTCCA CACCTGTGATATCGTCGGATCACAAACGGACGGCAGAGATTGCACCAAACCCTAGCCTCATTGT CCGCTTCGCCCGCAGCCGCGCAAGCGCGCCGCCTCGCCTCCTCCTCCCTCATGCGCGCCGGCCC GCTCCCTCGCTCTTCTCCTCCCCTCGCATACGCCGTCATCGCCGTTGTCGCCGCCGCCAACGTC GCCGCCGCCGACATCACCGCAGCTGCCGCCACCGCGCTCTTCTAGCCGTCATTGCCACATCGGA AGATCCAGCCACCCGAACGAGAGGTATGCTAGCGGCTGCCCTCTTTCTTTCTTTTTTTTCCTTA CAGCGATATTCCTACTGAAGAAAGCAGAGGAGGGTGATCCCATTGTGCTACTGCTAGACCCAAT GGAATTGAAGTGAGAAGGGAGCAATAGAGGAACTAGGGGAAAAGATGGGCAAAAGATTGTGCTA CTCTGATGCAGTTTTCAGAGACTACATTATTTATTTATATTCAGACCACATTCCAATTTATGAG GTAATTGGTTCATGCTTCATCCTAATTTCAATTATATGATTTTCTTTTCTTAGTATGCAATTTA CATCTAGCTGATATTTGCAATCTTTGAAGTCCAAATCAGAGAATGTGAAAAACTGCAAAGTTGC AGGTATCAAGTTTAAGGACAGAGGTAACTTCTGATAAGAAGTCTGTGTATTGCAGTTCGACTAT AACTTGATCTGTCAACTTGCAGAGGGTTTTCACCCCATTTACATGGCAGATAATGCCATTCTTT GTATATGGAAGTTGTAGAATTCAGCTCCTTAATCCAGTACTTTCATATTTGCTTTAGTTGTCAT ATTAAATTTTCAAATCAACTAAGTTTTGGTTCATCATGTTTTTAATTTGCAGAATATTACAATC ATGCAATGTTTATCTCATCGACAAACTGTTGAATGACCATCATTTTGGAAAATGAACAAGACAT CTCACTTTCAGCAACTGCTGATGCTTGCATTTGAATTATATTGAGGTATCCAAACTTCCAGAGC AATGTTCTATTCTATTTCAGCAAAATGATTTAGGCTTAATTCATCATGATGTCAAATGTCAAGT ATATGCTCTGTCCCACCTATGAGAAAGCAACAACCTATCTGACAAAGTGACAGTTATAGTTTGT AGGTCTTCCAATTTATATGTACAAGATACAAATGAAGAATATTCATAAATGATTGTGGGATAAG TTCAGACCCACATGAAAGGTTCTGCAACGTGTTTTCAGTTTTGATTTTTTTTAAAGAGATCCTA TGAGAAATTCTAGATGCGCTTCTTCATTCTATGATGGGTTGTCTATATACATTAGTTTTCCTTG ATTACACATGAGCGCATGTACCACTAATATAGTTGCCATCGGCTCCATGTTCTTCCTATTTCTT TACAAAATATCCTATTGTTATAGCAAGTGTACTTACTTTTTGGATAGGAGTTCATGAAAATTGT TCTTTTGTATACAGCATCCATGATTTATATTTATGTCTTAGTTGTTCTTTATCTTGAGACAAGC AAGGTGACAGATCCTTCTTGCAAAACAAAACTCCTACTTTTGTTGAGAGGGGCAACCCATTGTC CTCAGCTCATGAAAAAAAATAATGAACGAAGCTATCAGTTGAAGAACCAAGCACACTAAGATGA TAGAGGCTTATATGGTATATCTTGGATTGCATGACCACTTACCTGAGCAATAATTTCCTTCTCA ATATGGAACGATAGCCATATTTCACTAACTACATGATCTGTTATTTTTCTACCACATATTAAGT TTTCACTAGGTTAATTATTACAATGCAGTTTAGTTCTTTGTGATACAAATGAGGCATTTTAGTT AAGTCGTATGGAAACACCATTTCTCCCTACTTCACAGCCATACATATTTTAGTTTTTTGAGTTA GTCATGCTTCCCTTACCAACTTCTCTATATATTTTGTGGGCATATTTACCTTCTATTGTAAAAA CTGTCTAGACCAATTCTCATGGATTGCTCTTATTATTATCATTGTAGATGGTGATAGGGATCAG CAAGCGTGCAGTACATCTCAAGCACCTGCAAGCTGGTGGTTGGATCTTTACTGGCCATAGCTAC TAATTCTTTTTTATGAAAAAAATTCCTCAATCAAATAAATCTCAAATATCAGATTATATCTGGT CAGTGTAACTAATGTGTTATCCTGACTCTGAAGTCAATTTTGAATAATCTTGAATTGGATCAAT GCAAAGATATCTTCTATTCTTTACCCTTTGCATTATCGAGGATTGGTGAACATGTTAAGTTCAG ATGTTACGGTGATATCTATCTTTTGGGGGAAGCAAGATAAATTTATACCATATTTTACCTTAAT GATGCAATTTAGTTTTTTTATTTACAATTTGATCATATTACAGAGCATGCTTGGATGGCAGAGC AAAGAAAAGTACGAAGTATGGTGAAAGATGATTTTTGTTTTAAGTGCAAACAGTAATTGTTAGA TCACACGCAGCGTAGCGCGTGCTTCTTTCTAGTTACTATTATTTGAACTATGAATGCCCATGGT TCCAGTGCAATCAACACCAATTTGATTAGACAGGTAATACATGACCAGTACCAACTATGATGTA AACTAAATATAGATCCAGCAATCTTGCCGTAGGGATCAGTAGGTACCTGACCATGTGAATGGAG AAATAGCTCATCATCTTCCTGGCAAAATGCACCAATTTTGCGTACTTCAACAAGGTTGCCTGAA TCTCGTATCTGTAGGACATGAATTGTTTGATATCGAAGAGAGACAATGCATAGCAGGTCCTCAT ACAAGTAAGCTCCAATACTATGAGCCAGATTGATAAAATCATTGCGGAAAGCTTTCTCATCTAG TATTGCGCCATCGTCTAGCCTGAACAAGAGAAATATAGAAGTCGAGAACCATTCAAACGAAAGG AAAGGATGGTTATAATACATAGACATCATAACGGACAACTAAAAGTGCATTCCTAGCGAAACAA GATGATTGTACCTGACAAGATAGAAAGTAATTTTCTCAATTGATGGTACCCCATGAATAGCACC CTCAGTGGCACTTGAATCGTTGCTTTGTGCAGTTGATGTGGCAAATAAGCCAAACTGATGGCAC TCCATGTAAAGGAAAAAGTCCTTGCAGATGTATTCATTGCTAGATGCAAGTGAAATTGAGTAGA GCTGCTTAAAGAAGCTGTCGAATTTCTTTGCTTTGGGTGGAAGATCATGAGAGTCGCATGGCTC ATTGCATGAAAATGTTGGCCAGATGGGACGGTACACGATTAAATCTTGGTGGTTCCGGCTAAAA GCCACAAGATAGTTGCCATCATCAGTGAATTTACGAAATGAATAATCTGGGCAATCTATGTCAC ATATAGTGTAACTCGGAACCAAGTTCTCATAGAACTGTCTAACAGTGTTAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.125436703

Conservation Information
Conserved circRNAs	NA
PMCS	0.125436703

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							255797-251697(-)
255532-256040(-)
						
						Potential amino acid sequence
						
							MECHQFGLFATSTAQSNDSSATEGAIHGVPSIEKITFYLVRLDDGAILDEKAFRNDFINLAHSI
GAYLYEDLLCIVSLRYQTIHVLQIRDSGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGI
KQRLLSFIFRKTWNEESDQTLVNTVRQFYENLVPSYTICDIDCPDYSFRKFTDDGNYLVAFSRN
HQDLIVYRPIWPTFSCNEPCDSHDLPPKAKKFDSFFKQLYSISLASSNEYICKDFFLYMECHQF
GLFATSTAQSNDSSATEGAIHGVPSIEKITFYLVRLDDGAILDEKAFRNDFINLAHSIGAYLYE
DLLCIVSLRYQTIHVLQIRDSGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGIKQRLLS
FIFRKTWNEESDQTLVNTVRQFYENLVPSYTICDIDCPDYSFRKFTDDGNYLVAFSRNHQDLIV
YRPIWPTFSCNEPCDSHDLPPKAKKFDSFFKQLYSISLASSNEYICKDFFLYMECHQFGLFATS
TAQSNDSSATEGAIHGVPSIEKITFYLVRLDDGAILDEKAFRNDFINLAHSIGAYLYEDLLCIV
SLRYQTIHVLQIRDSGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGIKQRLLSFIFRKT
WNEESDQTLVNTVRQFYENLVPSYTICDIDCPDYSFRKFTDDGNYLVAFSRNHQDLIVYRPIWP
TFSCNEPCDSHDLPPKAKKFDSFFKQLYSISLASSNEYICKDFFLYMECHQFGLFATSTAQSND
SSATEGAIHGVPSIEKITFYLVRLDDGAILDEKAFRNDFINLAHSIGAYLYEDLLCIVSLRYQT
IHVLQIRDSGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGIKQRLLSFIFRKTWNEESD
QTL(-)
MRKLSAMILSIWLIVLELTCMRTCYALSLFDIKQFMSYRYEIQATLLKYAKLVHFARKMMSYFS
IHMVRLHEVFLFFLASSNGCCHLFFARHGMRNLIRPWLTLLDSSMRTWFRVTLYVT*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	255797-251697(-) 255532-256040(-)
Potential amino acid sequence	MECHQFGLFATSTAQSNDSSATEGAIHGVPSIEKITFYLVRLDDGAILDEKAFRNDFINLAHSI GAYLYEDLLCIVSLRYQTIHVLQIRDSGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGI KQRLLSFIFRKTWNEESDQTLVNTVRQFYENLVPSYTICDIDCPDYSFRKFTDDGNYLVAFSRN HQDLIVYRPIWPTFSCNEPCDSHDLPPKAKKFDSFFKQLYSISLASSNEYICKDFFLYMECHQF GLFATSTAQSNDSSATEGAIHGVPSIEKITFYLVRLDDGAILDEKAFRNDFINLAHSIGAYLYE DLLCIVSLRYQTIHVLQIRDSGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGIKQRLLS FIFRKTWNEESDQTLVNTVRQFYENLVPSYTICDIDCPDYSFRKFTDDGNYLVAFSRNHQDLIV YRPIWPTFSCNEPCDSHDLPPKAKKFDSFFKQLYSISLASSNEYICKDFFLYMECHQFGLFATS TAQSNDSSATEGAIHGVPSIEKITFYLVRLDDGAILDEKAFRNDFINLAHSIGAYLYEDLLCIV SLRYQTIHVLQIRDSGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGIKQRLLSFIFRKT WNEESDQTLVNTVRQFYENLVPSYTICDIDCPDYSFRKFTDDGNYLVAFSRNHQDLIVYRPIWP TFSCNEPCDSHDLPPKAKKFDSFFKQLYSISLASSNEYICKDFFLYMECHQFGLFATSTAQSND SSATEGAIHGVPSIEKITFYLVRLDDGAILDEKAFRNDFINLAHSIGAYLYEDLLCIVSLRYQT IHVLQIRDSGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGIKQRLLSFIFRKTWNEESD QTL(-) MRKLSAMILSIWLIVLELTCMRTCYALSLFDIKQFMSYRYEIQATLLKYAKLVHFARKMMSYFS IHMVRLHEVFLFFLASSNGCCHLFFARHGMRNLIRPWLTLLDSSMRTWFRVTLYVT*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0104600_circ_g.2

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