Detail information of Os02g0469200_circ_g.8


General Information
CircRNA Name Os02g0469200_circ_g.8
ID in PlantcircBase osa_circ_014627
Alias NA
Organism Oryza sativa
Position chr2: 15848036-15848142  JBrowse»
Reference genome IRGSP-1.0.38
Type   i-circRNA
Identification method CIRCexplorer
Parent gene Os02g0469200
Parent gene annotation Conserved hypothetical protein. (Os02t0469200-01);Similar to pre
dicted protein. (Os02t0469200-02)
Parent gene strand +
Alternative splicing Os02g0469200_circ_g.5 Os02g0469200_circ_g.6 Os02g0469200_circ_g.7 Os02g0469200_circ_g.9 Os02g0469200_circ_g.10 Os02g0469200_circ_g.11
Support reads 1
Tissues shoot
Exon boundary   No-No
Splicing signals   TA-AG
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ATAGTGGTAGACTTTACTTGTAGTTGATATTTCTAAGTTATATGCACTTGAGCgtacttttgat
ggccataaatttgggtgttccttttaattattcacattactac
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GTACTTTTGATGGCCATAAATTTGGGTGTTCCTTTTAATTATTCACATTACTACATAGTGGTAG
ACTTTACTTGTAGTTGATATTTCTAAGTTATATGCACTTGAGC
Conservation Information
Conserved circRNAs NA
PMCS 0.116043614
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017