Detailed infomation of each circRNA
General Information | |
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CircRNA Name | 1_circ_ag.2 |
ID in PlantcircBase | ath_circ_000407 |
Alias | 1:762510-767266 |
Organism | Arabidpsis thaliana |
Position | chr1: 762510-767266 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | AT1G03160_circ_g.1 AT1G03160_circ_g.3 AT1G03160_circ_g.4 AT1G03160_circ_g.5 AT1G03160_circ_g.6 1_circ_igg.7 1_circ_ig.1 |
Support reads | 1/1 |
Tissues | seedling;flower |
Exon boundary | NA-NA |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.231674566 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |