Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d011355_circ_g.1 |
ID in PlantcircBase | zma_circ_002813 |
Alias | circ2772 |
Organism | Zea mays |
Position | chr8: 147968962-147971374 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d011355 |
Parent gene annotation |
Zinc finger CCCH domain-containing protein 37 |
Parent gene strand | - |
Alternative splicing | Zm00001d011355_circ_g.2 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d011355_T016:9 Zm00001d011355_T011:9 Zm00001d011355_T014:8 Zm00001d011355_T005:9 Zm00001d011355_T007:9 Zm00001d011355_T015:9 Zm00001d011355_T018:9 Zm00001d011355_T003:8 Zm00001d011355_T006:9 Zm00001d011355_T004:9 Zm00001d011355_T002:9 Zm00001d011355_T017:9 Zm00001d011355_T008:7 Zm00001d011355_T012:9 Zm00001d011355_T010:9 Zm00001d011355_T013:9 Zm00001d011355_T001:9 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.063071519 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017b |