Plant Circular RNA Database

Detail information of Niben101Scf02068g01001_circ_g.4

			
						 General Information
					
						CircRNA Name
						Niben101Scf02068g01001_circ_g.4
					
						ID in PlantcircBase
						nbe_circ_000826
					
						Alias
						NA
					
						Organism
						
							Nicotiana benthamiana						
					
						Position
						
							chrNiben101Scf02068: 134174-135495  JBrowse»						
					
						Reference genome
						
							Niben.genome.v1.0.1						
					
						Type  
						
							ei-circRNA							
									
						Identification method
						DCC
					
						Parent gene
						
							Niben101Scf02068g01001						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							Niben101Scf02068g01001_circ_g.38 Niben101Scf02068g01001_circ_g.39 Niben101Scf02068g01001_circ_g.40 Niben101Scf02068g01001_circ_g.41 Niben101Scf02068g01001_circ_g.42 Niben101Scf02068g01001_circ_g.43 Niben101Scf02068g01001_circ_g.44 Niben101Scf02068g01001_circ_g.45 Niben101Scf02068g01001_circ_g.46 Niben101Scf02068g01001_circ_g.47 Niben101Scf02068g01001_circ_g.48 Niben101Scf02068g01001_circ_g.49 Niben101Scf02068g01001_circ_g.50 Niben101Scf02068g01001_circ_g.51 Niben101Scf02068g01001_circ_g.52 Niben101Scf02068g01001_circ_g.53 Niben101Scf02068g01001_circ_g.54 Niben101Scf02068g01001_circ_g.55 Niben101Scf02068g01001_circ_g.56 Niben101Scf02068g01001_circ_g.57 Niben101Scf02068g01001_circ_g.58 Niben101Scf02068g01001_circ_g.59 Niben101Scf02068g01001_circ_g.60 Niben101Scf02068g01001_circ_g.61 Niben101Scf02068g01001_circ_g.62 Niben101Scf02068g01001_circ_g.63 Niben101Scf02068g01001_circ_g.64 Niben101Scf02068g01001_circ_g.65 Niben101Scf02068g01001_circ_g.66 Niben101Scf02068g01001_circ_g.67 Niben101Scf02068g01001_circ_g.68 Niben101Scf02068g01001_circ_g.69 Niben101Scf02068g01001_circ_g.70 Niben101Scf02068g01001_circ_g.71 Niben101Scf02068g01001_circ_g.72 Niben101Scf02068g01001_circ_g.73 Niben101Scf02068g01001_circ_g.74 Niben101Scf02068g01001_circ_g.75 Niben101Scf02068g01001_circ_g.76 Niben101Scf02068g01001_circ_g.77 Niben101Scf02068g01001_circ_g.78 Niben101Scf02068g01001_circ_g.79 Niben101Scf02068g01001_circ_g.80 Niben101Scf02068g01001_circ_g.81 Niben101Scf02068g01001_circ_g.82 Niben101Scf02068g01001_circ_g.83 Niben101Scf02068g01001_circ_g.84 Niben101Scf02068g01001_circ_g.85 Niben101Scf02068g01001_circ_g.86 Niben101Scf02068g01001_circ_g.87 Niben101Scf02068g01001_circ_g.88 Niben101Scf02068g01001_circ_g.89 Niben101Scf02068g01001_circ_g.90 Niben101Scf02068g01001_circ_g.91 Niben101Scf02068g01001_circ_g.92 Niben101Scf02068g01001_circ_g.93 Niben101Scf02068g01001_circ_g.94 Niben101Scf02068g01001_circ_g.95 Niben101Scf02068g01001_circ_g.96 Niben101Scf02068g01001_circ_g.97 Niben101Scf02068g01001_circ_g.98 Niben101Scf02068g01001_circ_g.99 Niben101Scf02068g01001_circ_g.100 Niben101Scf02068g01001_circ_g.101 Niben101Scf02068g01001_circ_g.102 Niben101Scf02068g01001_circ_g.103 Niben101Scf02068g01001_circ_g.104 Niben101Scf02068g01001_circ_g.105 Niben101Scf02068g01001_circ_g.106 Niben101Scf02068g01001_circ_g.20 Niben101Scf02068g01001_circ_g.107 Niben101Scf02068g01001_circ_g.21 Niben101Scf02068g01001_circ_g.108 Niben101Scf02068g01001_circ_g.109 Niben101Scf02068g01001_circ_g.110 Niben101Scf02068g01001_circ_g.111 Niben101Scf02068g01001_circ_g.112 Niben101Scf02068g01001_circ_g.113 Niben101Scf02068g01001_circ_g.114 Niben101Scf02068g01001_circ_g.115 Niben101Scf02068g01001_circ_g.116 Niben101Scf02068g01001_circ_g.117 Niben101Scf02068g01001_circ_g.118 Niben101Scf02068g01001_circ_g.119 Niben101Scf02068g01001_circ_g.120 Niben101Scf02068g01001_circ_g.121 Niben101Scf02068g01001_circ_g.122 Niben101Scf02068g01001_circ_g.123 Niben101Scf02068g01001_circ_g.124 Niben101Scf02068g01001_circ_g.125 Niben101Scf02068g01001_circ_g.126 Niben101Scf02068g01001_circ_g.127 Niben101Scf02068g01001_circ_g.128 Niben101Scf02068g01001_circ_g.129 Niben101Scf02068g01001_circ_g.130 Niben101Scf02068g01001_circ_g.131 Niben101Scf02068g01001_circ_g.132 Niben101Scf02068g01001_circ_g.133 Niben101Scf02068g01001_circ_g.134 Niben101Scf02068g01001_circ_g.135 Niben101Scf02068g01001_circ_g.136 Niben101Scf02068g01001_circ_g.137 Niben101Scf02068g01001_circ_g.138 Niben101Scf02068g01001_circ_g.139 Niben101Scf02068g01001_circ_g.140 Niben101Scf02068g01001_circ_g.141 Niben101Scf02068g01001_circ_g.142 Niben101Scf02068g01001_circ_g.143 Niben101Scf02068g01001_circ_g.144 Niben101Scf02068g01001_circ_g.145 Niben101Scf02068g01001_circ_g.146 Niben101Scf02068g01001_circ_g.147 Niben101Scf02068g01001_circ_g.148 Niben101Scf02068g01001_circ_g.149 Niben101Scf02068g01001_circ_g.150 Niben101Scf02068g01001_circ_g.151 Niben101Scf02068g01001_circ_g.152 Niben101Scf02068g01001_circ_g.153 Niben101Scf02068g01001_circ_g.154 Niben101Scf02068g01001_circ_g.155 Niben101Scf02068g01001_circ_g.156 Niben101Scf02068g01001_circ_g.157 Niben101Scf02068g01001_circ_g.158 Niben101Scf02068g01001_circ_g.159 Niben101Scf02068g01001_circ_g.160 Niben101Scf02068g01001_circ_g.161 Niben101Scf02068g01001_circ_g.162 Niben101Scf02068g01001_circ_g.163 Niben101Scf02068g01001_circ_g.22 Niben101Scf02068g01001_circ_g.164 Niben101Scf02068g01001_circ_g.165 Niben101Scf02068g01001_circ_g.166 Niben101Scf02068g01001_circ_g.167 Niben101Scf02068g01001_circ_g.168 Niben101Scf02068g01001_circ_g.169 Niben101Scf02068g01001_circ_g.170 Niben101Scf02068g01001_circ_g.171 Niben101Scf02068g01001_circ_g.172 Niben101Scf02068g01001_circ_g.173 Niben101Scf02068g01001_circ_g.174 Niben101Scf02068g01001_circ_g.175 Niben101Scf02068g01001_circ_g.176 Niben101Scf02068g01001_circ_g.177 Niben101Scf02068g01001_circ_g.178 Niben101Scf02068g01001_circ_g.179 Niben101Scf02068g01001_circ_g.180 Niben101Scf02068g01001_circ_g.181 Niben101Scf02068g01001_circ_g.182 Niben101Scf02068g01001_circ_g.183 Niben101Scf02068g01001_circ_g.184 Niben101Scf02068g01001_circ_g.185 Niben101Scf02068g01001_circ_g.1 Niben101Scf02068g01001_circ_g.2 Niben101Scf02068g01001_circ_g.3 Niben101Scf02068g01001_circ_g.5 Niben101Scf02068g01001_circ_g.6 Niben101Scf02068g01001_circ_g.7 Niben101Scf02068g01001_circ_g.8 Niben101Scf02068g01001_circ_g.9 Niben101Scf02068g01001_circ_g.10 Niben101Scf02068g01001_circ_g.11 Niben101Scf02068g01001_circ_g.12 Niben101Scf02068g01001_circ_g.13 Niben101Scf02068g01001_circ_g.14 Niben101Scf02068g01001_circ_g.15 Niben101Scf02068g01001_circ_g.16 Niben101Scf02068g01001_circ_g.17 Niben101Scf02068g01001_circ_g.18 Niben101Scf02068g01001_circ_g.19 Niben101Scf02068g01001_circ_g.23 Niben101Scf02068g01001_circ_g.24 Niben101Scf02068g01001_circ_g.25 Niben101Scf02068g01001_circ_g.26 Niben101Scf02068g01001_circ_g.27 Niben101Scf02068g01001_circ_g.28 Niben101Scf02068g01001_circ_g.29 Niben101Scf02068g01001_circ_g.30 Niben101Scf02068g01001_circ_g.31 Niben101Scf02068g01001_circ_g.32 Niben101Scf02068g01001_circ_g.33 Niben101Scf02068g01001_circ_g.34 Niben101Scf02068g01001_circ_g.35 Niben101Scf02068g01001_circ_g.36 Niben101Scf02068g01001_circ_g.37 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							No-No							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-TC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Niben101Scf02068g01001.1:1

General Information
CircRNA Name	Niben101Scf02068g01001_circ_g.4
ID in PlantcircBase	nbe_circ_000826
Alias	NA
Organism	Nicotiana benthamiana
Position	chrNiben101Scf02068: 134174-135495 JBrowse»
Reference genome	Niben.genome.v1.0.1
Type	ei-circRNA
Identification method	DCC
Parent gene	Niben101Scf02068g01001
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	Niben101Scf02068g01001_circ_g.38 Niben101Scf02068g01001_circ_g.39 Niben101Scf02068g01001_circ_g.40 Niben101Scf02068g01001_circ_g.41 Niben101Scf02068g01001_circ_g.42 Niben101Scf02068g01001_circ_g.43 Niben101Scf02068g01001_circ_g.44 Niben101Scf02068g01001_circ_g.45 Niben101Scf02068g01001_circ_g.46 Niben101Scf02068g01001_circ_g.47 Niben101Scf02068g01001_circ_g.48 Niben101Scf02068g01001_circ_g.49 Niben101Scf02068g01001_circ_g.50 Niben101Scf02068g01001_circ_g.51 Niben101Scf02068g01001_circ_g.52 Niben101Scf02068g01001_circ_g.53 Niben101Scf02068g01001_circ_g.54 Niben101Scf02068g01001_circ_g.55 Niben101Scf02068g01001_circ_g.56 Niben101Scf02068g01001_circ_g.57 Niben101Scf02068g01001_circ_g.58 Niben101Scf02068g01001_circ_g.59 Niben101Scf02068g01001_circ_g.60 Niben101Scf02068g01001_circ_g.61 Niben101Scf02068g01001_circ_g.62 Niben101Scf02068g01001_circ_g.63 Niben101Scf02068g01001_circ_g.64 Niben101Scf02068g01001_circ_g.65 Niben101Scf02068g01001_circ_g.66 Niben101Scf02068g01001_circ_g.67 Niben101Scf02068g01001_circ_g.68 Niben101Scf02068g01001_circ_g.69 Niben101Scf02068g01001_circ_g.70 Niben101Scf02068g01001_circ_g.71 Niben101Scf02068g01001_circ_g.72 Niben101Scf02068g01001_circ_g.73 Niben101Scf02068g01001_circ_g.74 Niben101Scf02068g01001_circ_g.75 Niben101Scf02068g01001_circ_g.76 Niben101Scf02068g01001_circ_g.77 Niben101Scf02068g01001_circ_g.78 Niben101Scf02068g01001_circ_g.79 Niben101Scf02068g01001_circ_g.80 Niben101Scf02068g01001_circ_g.81 Niben101Scf02068g01001_circ_g.82 Niben101Scf02068g01001_circ_g.83 Niben101Scf02068g01001_circ_g.84 Niben101Scf02068g01001_circ_g.85 Niben101Scf02068g01001_circ_g.86 Niben101Scf02068g01001_circ_g.87 Niben101Scf02068g01001_circ_g.88 Niben101Scf02068g01001_circ_g.89 Niben101Scf02068g01001_circ_g.90 Niben101Scf02068g01001_circ_g.91 Niben101Scf02068g01001_circ_g.92 Niben101Scf02068g01001_circ_g.93 Niben101Scf02068g01001_circ_g.94 Niben101Scf02068g01001_circ_g.95 Niben101Scf02068g01001_circ_g.96 Niben101Scf02068g01001_circ_g.97 Niben101Scf02068g01001_circ_g.98 Niben101Scf02068g01001_circ_g.99 Niben101Scf02068g01001_circ_g.100 Niben101Scf02068g01001_circ_g.101 Niben101Scf02068g01001_circ_g.102 Niben101Scf02068g01001_circ_g.103 Niben101Scf02068g01001_circ_g.104 Niben101Scf02068g01001_circ_g.105 Niben101Scf02068g01001_circ_g.106 Niben101Scf02068g01001_circ_g.20 Niben101Scf02068g01001_circ_g.107 Niben101Scf02068g01001_circ_g.21 Niben101Scf02068g01001_circ_g.108 Niben101Scf02068g01001_circ_g.109 Niben101Scf02068g01001_circ_g.110 Niben101Scf02068g01001_circ_g.111 Niben101Scf02068g01001_circ_g.112 Niben101Scf02068g01001_circ_g.113 Niben101Scf02068g01001_circ_g.114 Niben101Scf02068g01001_circ_g.115 Niben101Scf02068g01001_circ_g.116 Niben101Scf02068g01001_circ_g.117 Niben101Scf02068g01001_circ_g.118 Niben101Scf02068g01001_circ_g.119 Niben101Scf02068g01001_circ_g.120 Niben101Scf02068g01001_circ_g.121 Niben101Scf02068g01001_circ_g.122 Niben101Scf02068g01001_circ_g.123 Niben101Scf02068g01001_circ_g.124 Niben101Scf02068g01001_circ_g.125 Niben101Scf02068g01001_circ_g.126 Niben101Scf02068g01001_circ_g.127 Niben101Scf02068g01001_circ_g.128 Niben101Scf02068g01001_circ_g.129 Niben101Scf02068g01001_circ_g.130 Niben101Scf02068g01001_circ_g.131 Niben101Scf02068g01001_circ_g.132 Niben101Scf02068g01001_circ_g.133 Niben101Scf02068g01001_circ_g.134 Niben101Scf02068g01001_circ_g.135 Niben101Scf02068g01001_circ_g.136 Niben101Scf02068g01001_circ_g.137 Niben101Scf02068g01001_circ_g.138 Niben101Scf02068g01001_circ_g.139 Niben101Scf02068g01001_circ_g.140 Niben101Scf02068g01001_circ_g.141 Niben101Scf02068g01001_circ_g.142 Niben101Scf02068g01001_circ_g.143 Niben101Scf02068g01001_circ_g.144 Niben101Scf02068g01001_circ_g.145 Niben101Scf02068g01001_circ_g.146 Niben101Scf02068g01001_circ_g.147 Niben101Scf02068g01001_circ_g.148 Niben101Scf02068g01001_circ_g.149 Niben101Scf02068g01001_circ_g.150 Niben101Scf02068g01001_circ_g.151 Niben101Scf02068g01001_circ_g.152 Niben101Scf02068g01001_circ_g.153 Niben101Scf02068g01001_circ_g.154 Niben101Scf02068g01001_circ_g.155 Niben101Scf02068g01001_circ_g.156 Niben101Scf02068g01001_circ_g.157 Niben101Scf02068g01001_circ_g.158 Niben101Scf02068g01001_circ_g.159 Niben101Scf02068g01001_circ_g.160 Niben101Scf02068g01001_circ_g.161 Niben101Scf02068g01001_circ_g.162 Niben101Scf02068g01001_circ_g.163 Niben101Scf02068g01001_circ_g.22 Niben101Scf02068g01001_circ_g.164 Niben101Scf02068g01001_circ_g.165 Niben101Scf02068g01001_circ_g.166 Niben101Scf02068g01001_circ_g.167 Niben101Scf02068g01001_circ_g.168 Niben101Scf02068g01001_circ_g.169 Niben101Scf02068g01001_circ_g.170 Niben101Scf02068g01001_circ_g.171 Niben101Scf02068g01001_circ_g.172 Niben101Scf02068g01001_circ_g.173 Niben101Scf02068g01001_circ_g.174 Niben101Scf02068g01001_circ_g.175 Niben101Scf02068g01001_circ_g.176 Niben101Scf02068g01001_circ_g.177 Niben101Scf02068g01001_circ_g.178 Niben101Scf02068g01001_circ_g.179 Niben101Scf02068g01001_circ_g.180 Niben101Scf02068g01001_circ_g.181 Niben101Scf02068g01001_circ_g.182 Niben101Scf02068g01001_circ_g.183 Niben101Scf02068g01001_circ_g.184 Niben101Scf02068g01001_circ_g.185 Niben101Scf02068g01001_circ_g.1 Niben101Scf02068g01001_circ_g.2 Niben101Scf02068g01001_circ_g.3 Niben101Scf02068g01001_circ_g.5 Niben101Scf02068g01001_circ_g.6 Niben101Scf02068g01001_circ_g.7 Niben101Scf02068g01001_circ_g.8 Niben101Scf02068g01001_circ_g.9 Niben101Scf02068g01001_circ_g.10 Niben101Scf02068g01001_circ_g.11 Niben101Scf02068g01001_circ_g.12 Niben101Scf02068g01001_circ_g.13 Niben101Scf02068g01001_circ_g.14 Niben101Scf02068g01001_circ_g.15 Niben101Scf02068g01001_circ_g.16 Niben101Scf02068g01001_circ_g.17 Niben101Scf02068g01001_circ_g.18 Niben101Scf02068g01001_circ_g.19 Niben101Scf02068g01001_circ_g.23 Niben101Scf02068g01001_circ_g.24 Niben101Scf02068g01001_circ_g.25 Niben101Scf02068g01001_circ_g.26 Niben101Scf02068g01001_circ_g.27 Niben101Scf02068g01001_circ_g.28 Niben101Scf02068g01001_circ_g.29 Niben101Scf02068g01001_circ_g.30 Niben101Scf02068g01001_circ_g.31 Niben101Scf02068g01001_circ_g.32 Niben101Scf02068g01001_circ_g.33 Niben101Scf02068g01001_circ_g.34 Niben101Scf02068g01001_circ_g.35 Niben101Scf02068g01001_circ_g.36 Niben101Scf02068g01001_circ_g.37
Support reads	NA
Tissues	leaf
Exon boundary	No-No "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-TC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Niben101Scf02068g01001.1:1

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
						 Sequences
					
						Splice junction sequence  
						
							AACATACAAGCTATTCTTCATTGTTCAACCACTAGGCTGACGGCCGCCAACTGAACCCCCTTCC
CTCTGGGTCACAGCCCTTTCTTAGACATCCTGATCCtcctcctccttattctgcctctatcaca
gacaaaatataataaacaactcagagcagaagcccagatggattcttccatttcttctatctgt
tcatgaca

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

						Full-length trsnacripts
						
							NA						
					
						Genomic sequence
						
							TCCTCCTCCTTATTCTGCCTCTATCACAGACAAAATATAATAAACAACTCAGAGCAGAAGCCCA
GATGGATTCTTCCATTTCTTCTATCTGTTCATGACAGTGTAAATAGACTTAGAACGAGAATAGC
AATTAGCACTGAAGTAACATCATCGCACAATGCTATTAATTAAAGATAAATGAGCTCAAACTAA
GAGAACAAGTGAGAAGCAGGAGATGATGCTGGATCAAGGAACCATTGCTTTTAACCTAATAAAT
CTGAGCATGAGAAGCACAGTTCCATCTACTTACGAGGTACAGGTGTTTATGAGCCCATGATTCC
ATGTTCATTATATCAGATACATTTGAAAGGAATTTGCACCATATTATCCTAAAAGGAAGAAATA
TATAAACAAAAAGAAAGTACTCCAATATGGAGAAACTTTCTTATTCCAGTTTGCCTCAGTGACG
CGTTACCAATGAATGGAACACAAGGCCTTCGAGGGGTTGAAACTTAAGTTACACAACTTGAAAG
ATTACTTTCTGTTAGTGCATTATTTTGGCGGCTGAAACATGCAATCCTGATGTCAGTGGATCTT
GCCAATTTTTAGGATAACCAGAGAGGCTGTTCAGTACAACAGATGGGATAAGCTAGAATGGCAA
TCCCTTCAGATTTTCAGATTGAATGGTAGGGAGGACATACCGACCAAATTGGATTGCGTCCAAT
GTTTGGCAAACAGGTATAACAGGTAACCGAAAAATCAACTATATCTTCTCATTTCAATGTAAAC
TCCGAGGTTTAGCTAGTTTGGAAAAACAGAGTAAACTGCCCAATATGTCTCCAACTTATTCTGG
AAAAGCAACCATTTTCTCCTCGCCTAGCATTTCGTTTATATTGCATCTTCAACTCATAAGATTT
TGCCCTTATATGGTCCTTCCAGCCATCGTCGGCCATATATGGTGTTTCATCCATTTTGGGCTCC
TACACTAACACTAATTCTACAACAGCTATCTTGCACATGTGGGGATCCTGAATGACAATGCATA
GATCATCTACTTTTGTGGTTCACTCTACTCACATCATTCCCACCTTTACTATCCCTTTCCTGTA
CAGTAATGAAACAAGAACCTGGACATACGAGTAAGACCTGATGCTTCACAAAGCAAAACATCGA
ACAAAATTTCTGTCCAAAAACGCAAAGGAAAAAAAAAGAAAATGAAACAATAGACAAGCAGAAA
ATAAAGAACATACAAGCTATTCTTCATTGTTCAACCACTAGGCTGACGGCCGCCAACTGAACCC
CCTTCCCTCTGGGTCACAGCCCTTTCTTAGACATCCTGATCC

Sequences
Splice junction sequence	AACATACAAGCTATTCTTCATTGTTCAACCACTAGGCTGACGGCCGCCAACTGAACCCCCTTCC CTCTGGGTCACAGCCCTTTCTTAGACATCCTGATCCtcctcctccttattctgcctctatcaca gacaaaatataataaacaactcagagcagaagcccagatggattcttccatttcttctatctgt tcatgaca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TCCTCCTCCTTATTCTGCCTCTATCACAGACAAAATATAATAAACAACTCAGAGCAGAAGCCCA GATGGATTCTTCCATTTCTTCTATCTGTTCATGACAGTGTAAATAGACTTAGAACGAGAATAGC AATTAGCACTGAAGTAACATCATCGCACAATGCTATTAATTAAAGATAAATGAGCTCAAACTAA GAGAACAAGTGAGAAGCAGGAGATGATGCTGGATCAAGGAACCATTGCTTTTAACCTAATAAAT CTGAGCATGAGAAGCACAGTTCCATCTACTTACGAGGTACAGGTGTTTATGAGCCCATGATTCC ATGTTCATTATATCAGATACATTTGAAAGGAATTTGCACCATATTATCCTAAAAGGAAGAAATA TATAAACAAAAAGAAAGTACTCCAATATGGAGAAACTTTCTTATTCCAGTTTGCCTCAGTGACG CGTTACCAATGAATGGAACACAAGGCCTTCGAGGGGTTGAAACTTAAGTTACACAACTTGAAAG ATTACTTTCTGTTAGTGCATTATTTTGGCGGCTGAAACATGCAATCCTGATGTCAGTGGATCTT GCCAATTTTTAGGATAACCAGAGAGGCTGTTCAGTACAACAGATGGGATAAGCTAGAATGGCAA TCCCTTCAGATTTTCAGATTGAATGGTAGGGAGGACATACCGACCAAATTGGATTGCGTCCAAT GTTTGGCAAACAGGTATAACAGGTAACCGAAAAATCAACTATATCTTCTCATTTCAATGTAAAC TCCGAGGTTTAGCTAGTTTGGAAAAACAGAGTAAACTGCCCAATATGTCTCCAACTTATTCTGG AAAAGCAACCATTTTCTCCTCGCCTAGCATTTCGTTTATATTGCATCTTCAACTCATAAGATTT TGCCCTTATATGGTCCTTCCAGCCATCGTCGGCCATATATGGTGTTTCATCCATTTTGGGCTCC TACACTAACACTAATTCTACAACAGCTATCTTGCACATGTGGGGATCCTGAATGACAATGCATA GATCATCTACTTTTGTGGTTCACTCTACTCACATCATTCCCACCTTTACTATCCCTTTCCTGTA CAGTAATGAAACAAGAACCTGGACATACGAGTAAGACCTGATGCTTCACAAAGCAAAACATCGA ACAAAATTTCTGTCCAAAAACGCAAAGGAAAAAAAAAGAAAATGAAACAATAGACAAGCAGAAA ATAAAGAACATACAAGCTATTCTTCATTGTTCAACCACTAGGCTGACGGCCGCCAACTGAACCC CCTTCCCTCTGGGTCACAGCCCTTTCTTAGACATCCTGATCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
						 Functional Information
					
						Coding potential
						NA
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	NA
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Guria et al., 2019

circRNA

Detail information of Niben101Scf02068g01001_circ_g.4

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