Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA016676_circ_g.2 |
ID in PlantcircBase | osi_circ_014510 |
Alias | Chr03:27903816_27909617(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr4: 23171231-23177034 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRI2, CIRCexplorer2 |
Parent gene | BGIOSGA016676 |
Parent gene annotation | NA |
Parent gene strand | + |
Alternative splicing | BGIOSGA016676_circ_g.1 BGIOSGA016676_circ_igg.1 BGIOSGA016676_circ_igg.2 BGIOSGA016676_circ_g.3 BGIOSGA016676_circ_igg.4 BGIOSGA016676_circ_igg.5 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | Yes-No |
Splicing signals | TA-AG |
Number of exons covered | BGIOSGA016676-TA:5 |
Conservation Information | |
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Conserved circRNAs | osa_circ_020802 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |