Plant Circular RNA Database

Detail information of Zm00001d027265_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d027265_circ_g.2
					
						ID in PlantcircBase
						zma_circ_006335
					
						Alias
						zma_circ_0000215
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 1016683-1021126  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d027265						
					
						Parent gene annotation
						
							ATPase 7 plasma membrane-type
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d027265_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d027265_T007:2
Zm00001d027265_T005:2
Zm00001d027265_T004:2
Zm00001d027265_T002:2

General Information
CircRNA Name	Zm00001d027265_circ_g.2
ID in PlantcircBase	zma_circ_006335
Alias	zma_circ_0000215
Organism	Zea mays
Position	chr1: 1016683-1021126 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d027265
Parent gene annotation	ATPase 7 plasma membrane-type
Parent gene strand	+
Alternative splicing	Zm00001d027265_circ_g.1
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d027265_T007:2 Zm00001d027265_T005:2 Zm00001d027265_T004:2 Zm00001d027265_T002:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCTTCTTCATCATTGCTGGGTGACAAAAAAGGTGACATCGCAGTTCTACCAGTGGACGAATTGA
TTGAGCAAGCGGATGGATTTGCTGGAGTTTTCCCAGgaagtacctgaagggactaaggaaagtt
ctggtgggccttggcaatttattggtcttctcccactctttgatcctcctcgccatgacagtgc
tgaaacta

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GAAGTACCTGAAGGGACTAAGGAAAGTTCTGGTGGGCCTTGGCAATTTATTGGTCTTCTCCCAC
TCTTTGATCCTCCTCGCCATGACAGTGCTGAAACTATACGCAGAGCTCTTGACCTTGGAGTCAG
TGTAAAAATGATTACAGGTGTCTCTTTTTACGCACTATTTAATATCTGCTTAATGGCAAGGAGT
TGCTTAATTTTGTAGTTAGAACTTTTTTTTCTCGAACGCGTAGGAGAGCTGCGCATCATTATAT
TAAGAGAGGAAAAGTCCAAAGTGGATCGAAATACAAGACCAAACCCTCAAGCCTCCACTCCAGC
ACCCCTAAGGGGGGGAGCCTGACGGGCTCTACTAGACCTTATTTAAAGTGACAATAATTCCAAA
ACTGTTTAAATGTTTCGCTCCCGCCTTACTCCAACTGATCAATTCATCTAGAAACAACCTCTTA
GTCAAACTAATGGAAGGGCTCACTCCATCAAAAACAGCCCTATTATGAGAGAGCCATAAGCACC
AAGCTCCAAGGATAATGACACTATTGAAACCCCTCCTCTTGCACCTATGCACTCTTTTAGAGAT
CTTTTCCCACCACACAGCAAATGACTGTTCAGCAGCAATAGGAGTGAGGTTGATAATGGACTGG
TATTTCCCTTGGACTCGCTGTCCTCTGTAGCTGGGAGCAGTCAATTAGAACACTTTACTGTAAT
TGACCTAAAGTGGTAATCAGGGAGAGTTGTATGTGAGGAATAATAGTGTATCGGTGCAGTTCTG
CAATTGTAATGGGAGAACATGGTGGCTCACTTGCGTGTATGGCCCACAGGGAAACAGTGAAAAA
GTCCTTTTTTTTACAGGAGCTTAGGGACCTGAGATTGTTGTGTCATGGCCCTTGGATGATTGCT
GGTGATTTCAACATGATTTATAAAGCTGAAGATAAGAATAATACTAACATAAACCGAGTTATGA
TGGGAAGATTTCGTAGCTTCATCAATGATCTTGCTCTAAGTGAGCTTCCTTTAATTGGTCGGAA
ATTCACTTGGTCTAGTCAGCAGAATCCCCCAACCCTAGTGAAACTTGATAGAGTTTTATGCACA
CTGGACTGGGTGGATTTGTTTCCAAATTCCTTACTTCAGAGTTCTGCCTCCAATGACTCAGACC
ACTGCCCCCTCCTTTTGGGCCTGAATGACAATAGTATGGCAGGAAGGCGCAGGTTTCATTTTGA
GTCCTTTTGGCCTAAGTTTGAGGGATTTCTGGAGGCTGTTTCGTTGGCCTGGCATTCTGTTCCA
GCTGTGCAGTGTCCTTTTGCAACGTTGAACTCTAAACTGAAAGCTACTGCTCGTGGGCTGCAGG
CTTGGAGTGCTAAAAAGATTGGGCATATTTCAGCCTCTTTAGCCCTTGCTCGTGTTCTCCTGCA
CCAGTTGGAAATTGTTCAAGACAGTCGTGGTCTTTCCCCAGCTGAGCTATGGTTTCTCTTATGC
CTTAAGAAACATTCCCTTGCTCTGTCTTCACTTCAAAGGACAATTGCCAGGCTTCGTTCCAGAA
TTGGGTGGCTGCGTGAGGGTGATGCTAATACTAAATTATTCCACATGCATTCAAGATTCCGCAA
GAAGAAGAATTTTGTTCCTAAATTAATCTCTAATGGTGCTGTCCTAACCAGCCATGATGCCAAA
GCTGATCTGGTCAACGAATTCTATGGCAATCTTTTGGGACAATGCAGCGATAGAGAGCAAACTA
TCTCTCTGGAAAGTTTGGGAATTCCTTGTCATGATCTGTCAGCCTTAGATGCACCATTCACTGA
GAAAGAGGTATGGGACACAATTTTGCACCTTCCTTCGGACAAGGCTCCAGGGCCAGATGGGTTC
ACAGGAAAATTCTATAGAGTCTGCTGGGAGATTATTAAGGCTGATGTTATGGCTGTTTTCTCGG
CGGTTGGGAGCAGAAGGTTCGCTAATTTTCAGATCCTTAATACTGCTTATATCACCCTTATTCC
AAAGTTTGAGGGGGCCGATCAAGTTAAAAATTTCAGACCTATCAGTTTAGTTCATAGTGTTGCA
AAATTGCTCACTAAACTTCTCGCTAATCGTTTGGCTGGAAGACTTCATGATATGGTTTCTCCTA
ACCAAAGTGCTTTTATTAAAGGCCGCTTCATTCAGGATAATTATATGTTGGTGCAGCAAACCAC
CCGCTACCTCCATCAACAGAAGCAACCTAGGATGCTTCTAAAGCTTGATATCTCAAAGGCCTTT
GATTCAGTCTCATGGCCCTTCCTCCTGGAAGTCTTGCAACATTTGGGTTTTGGCCAAGTATGGA
GAGATATTATTAGTGGCTTGCTATGGACTTCCTCATCTCAGGTGTTACTTAATGGGTTACCTGG
ACAACCTATTCTTCATCGTCGTGGTCTCCGGCAGGGGATCCTCTGTCTCCTTTTCTGTTCATCT
TGGTCATGGATACTCTGGGCTTCTTGATTAATAAGGCCGCACAGGATGGACTGCTGCAGCCCCT
TGCTCCTCGGGCATTGCAACACCGGGTTTCTCTCTATGCGGATGATGTGGTGATCTTTCTTCGG
CCGGCAGCCATGGATATCAATGTTATTCTAGATTGTCTTCAGCTGTTTGGAGATGCTTCGGGTT
TACGAACGAATGTTCAGAAAAGCAGTGTGTACCCTATTAGATGTGGAGATCAGGACCTTGCTTT
GCTGCAGAACATGTTGCCTTGTGAGTTAGCTGAATTCCCTTGCCGCTATCTGGGTTTACCGCTT
ACCATTAAAAAGCTTTCAAAAATCCAAGTACAACCCATCATTGATAAGATTGCAAATCAACTCT
CCGGATGGAAGGCTGAGTTATTGACTAAAGCTGGTCGTAAGGTGCACGTCCAGCATGTTCTCAC
AGGGATGGTGATCTACTTGGCCATGGCTGTTGACCTTCCAGCTTGGGCCCTTAAAGCCATTGAT
CAGATTCGTCGAGGCTTTCTGTGGCGAGGTCGAAGAGATGTAAAAGGTGGTCACTGTCACGTGG
CTTGGGGAATTGTTTGTAGGCCTCGCGAATTGGGTGGTCTAGGCATTTCCAGCATGAAAGAACT
TGCTTGGTCTCTTAGAATGAGATGGCTTTGGCTGGCTAAAACTGAGCCATCTCGCCCGTGGGCC
TCTCTTGCTATCCAGGTTCCTAAAAAGGTAAAAGATTTCTTCTCCATGGCTATGCAAACTGAGC
TTGGTAATGGGGCTACAACCTTTTTCTGGACCGATAGGTGGTTATCGGGTCACAGAATTGCAGA
GTTAGCCCCTCGATTATTTGGGATCATCCCTAAGAGACGGGTTAGCAAGAGAACAGTGGTGGAT
GCTATCTCTAATCAGAGCTGGATTTCTGACATTCAAGGAGCTCTTTCGGTTGGAATTATCAATG
AATTTCTCATTTTGTGGGATTTAATTGACTCAATTGTTTTAAGACCTCAAGTTGAAGACAAACA
TTTCTTCCGTCTAGCTGCAAACGGAAAGTTCTCCTCAAAGGAAGCATATAGGGGTTTCTTTTTG
GGATCTTCTGAGTTTGAGCCTTTTCATAGAATATGGAAATCTTGGGCTCCCCCAAAAACCAAGT
TTTTTATGTGGTTGGTCGCTCACAGGAAGGTTTGGACGGCAGACAGGCTGCAGAAAAGAGGTAT
GGACCATCCAGAGAGATGTCCACTATGTGACCAGGATCAAGAAACCTTGGACCATATGTTGATT
GGATGTGTTTTTGCTCGTGAATTCTGGTTTAAATTGCTTCTTCAAGTGAACCTGCAGTTTCTTG
CCTCCCAATCTGAGGATAGTGCTTTTCTTGAATGGTGGAGAATGTTATGTATCAAAGTCACTGG
AATTGCAAGGGATGGCCTCAATTCTCTAGTCATTCTGGGAGTTTGGACCTTATGGAAGCAACGC
AATGGATGTGTTTTTGACAATAAGAACCCCAGTATTGCTGATGCTATTAGAAGAGTTGAGTTGG
AGGTTCACCTATGGGAGATGGCTGGTGCAAAAAAACTGTCTTTGCTCACCGCCCCCATTCCAGG
CATCCCTGCTAGTTAGCTAGCATTGTGGTTATTTGTGTTAGGTTCTTCTTTAGACATGGATGGG
TTTCTGTATGCCTGTTACTGGCCGCCATAGGCGCCTCTTTTGTTTTCTTCTGTAATTGTCCTTC
TTCTTTAATATAATATCGCGCAGTTCTCCTGCGCTTTCGAGAAAAAAAAACTACCAACTTGCTA
TTTTTTTTGCTTCATTCCCGCACATCATTGTGAAGTTGCCCCTTCAAATCCTTTTCAGGTGATC
AGTTGGCTATAGCTAAGGAGACTGGCCGGAGACTAGGAATGGGCACAAACATGTATCCTTCTTC
ATCATTGCTGGGTGACAAAAAAGGTGACATCGCAGTTCTACCAGTGGACGAATTGATTGAGCAA
GCGGATGGATTTGCTGGAGTTTTCCCAG
						
					

			
		

Sequences
Splice junction sequence	CCTTCTTCATCATTGCTGGGTGACAAAAAAGGTGACATCGCAGTTCTACCAGTGGACGAATTGA TTGAGCAAGCGGATGGATTTGCTGGAGTTTTCCCAGgaagtacctgaagggactaaggaaagtt ctggtgggccttggcaatttattggtcttctcccactctttgatcctcctcgccatgacagtgc tgaaacta
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GAAGTACCTGAAGGGACTAAGGAAAGTTCTGGTGGGCCTTGGCAATTTATTGGTCTTCTCCCAC TCTTTGATCCTCCTCGCCATGACAGTGCTGAAACTATACGCAGAGCTCTTGACCTTGGAGTCAG TGTAAAAATGATTACAGGTGTCTCTTTTTACGCACTATTTAATATCTGCTTAATGGCAAGGAGT TGCTTAATTTTGTAGTTAGAACTTTTTTTTCTCGAACGCGTAGGAGAGCTGCGCATCATTATAT TAAGAGAGGAAAAGTCCAAAGTGGATCGAAATACAAGACCAAACCCTCAAGCCTCCACTCCAGC ACCCCTAAGGGGGGGAGCCTGACGGGCTCTACTAGACCTTATTTAAAGTGACAATAATTCCAAA ACTGTTTAAATGTTTCGCTCCCGCCTTACTCCAACTGATCAATTCATCTAGAAACAACCTCTTA GTCAAACTAATGGAAGGGCTCACTCCATCAAAAACAGCCCTATTATGAGAGAGCCATAAGCACC AAGCTCCAAGGATAATGACACTATTGAAACCCCTCCTCTTGCACCTATGCACTCTTTTAGAGAT CTTTTCCCACCACACAGCAAATGACTGTTCAGCAGCAATAGGAGTGAGGTTGATAATGGACTGG TATTTCCCTTGGACTCGCTGTCCTCTGTAGCTGGGAGCAGTCAATTAGAACACTTTACTGTAAT TGACCTAAAGTGGTAATCAGGGAGAGTTGTATGTGAGGAATAATAGTGTATCGGTGCAGTTCTG CAATTGTAATGGGAGAACATGGTGGCTCACTTGCGTGTATGGCCCACAGGGAAACAGTGAAAAA GTCCTTTTTTTTACAGGAGCTTAGGGACCTGAGATTGTTGTGTCATGGCCCTTGGATGATTGCT GGTGATTTCAACATGATTTATAAAGCTGAAGATAAGAATAATACTAACATAAACCGAGTTATGA TGGGAAGATTTCGTAGCTTCATCAATGATCTTGCTCTAAGTGAGCTTCCTTTAATTGGTCGGAA ATTCACTTGGTCTAGTCAGCAGAATCCCCCAACCCTAGTGAAACTTGATAGAGTTTTATGCACA CTGGACTGGGTGGATTTGTTTCCAAATTCCTTACTTCAGAGTTCTGCCTCCAATGACTCAGACC ACTGCCCCCTCCTTTTGGGCCTGAATGACAATAGTATGGCAGGAAGGCGCAGGTTTCATTTTGA GTCCTTTTGGCCTAAGTTTGAGGGATTTCTGGAGGCTGTTTCGTTGGCCTGGCATTCTGTTCCA GCTGTGCAGTGTCCTTTTGCAACGTTGAACTCTAAACTGAAAGCTACTGCTCGTGGGCTGCAGG CTTGGAGTGCTAAAAAGATTGGGCATATTTCAGCCTCTTTAGCCCTTGCTCGTGTTCTCCTGCA CCAGTTGGAAATTGTTCAAGACAGTCGTGGTCTTTCCCCAGCTGAGCTATGGTTTCTCTTATGC CTTAAGAAACATTCCCTTGCTCTGTCTTCACTTCAAAGGACAATTGCCAGGCTTCGTTCCAGAA TTGGGTGGCTGCGTGAGGGTGATGCTAATACTAAATTATTCCACATGCATTCAAGATTCCGCAA GAAGAAGAATTTTGTTCCTAAATTAATCTCTAATGGTGCTGTCCTAACCAGCCATGATGCCAAA GCTGATCTGGTCAACGAATTCTATGGCAATCTTTTGGGACAATGCAGCGATAGAGAGCAAACTA TCTCTCTGGAAAGTTTGGGAATTCCTTGTCATGATCTGTCAGCCTTAGATGCACCATTCACTGA GAAAGAGGTATGGGACACAATTTTGCACCTTCCTTCGGACAAGGCTCCAGGGCCAGATGGGTTC ACAGGAAAATTCTATAGAGTCTGCTGGGAGATTATTAAGGCTGATGTTATGGCTGTTTTCTCGG CGGTTGGGAGCAGAAGGTTCGCTAATTTTCAGATCCTTAATACTGCTTATATCACCCTTATTCC AAAGTTTGAGGGGGCCGATCAAGTTAAAAATTTCAGACCTATCAGTTTAGTTCATAGTGTTGCA AAATTGCTCACTAAACTTCTCGCTAATCGTTTGGCTGGAAGACTTCATGATATGGTTTCTCCTA ACCAAAGTGCTTTTATTAAAGGCCGCTTCATTCAGGATAATTATATGTTGGTGCAGCAAACCAC CCGCTACCTCCATCAACAGAAGCAACCTAGGATGCTTCTAAAGCTTGATATCTCAAAGGCCTTT GATTCAGTCTCATGGCCCTTCCTCCTGGAAGTCTTGCAACATTTGGGTTTTGGCCAAGTATGGA GAGATATTATTAGTGGCTTGCTATGGACTTCCTCATCTCAGGTGTTACTTAATGGGTTACCTGG ACAACCTATTCTTCATCGTCGTGGTCTCCGGCAGGGGATCCTCTGTCTCCTTTTCTGTTCATCT TGGTCATGGATACTCTGGGCTTCTTGATTAATAAGGCCGCACAGGATGGACTGCTGCAGCCCCT TGCTCCTCGGGCATTGCAACACCGGGTTTCTCTCTATGCGGATGATGTGGTGATCTTTCTTCGG CCGGCAGCCATGGATATCAATGTTATTCTAGATTGTCTTCAGCTGTTTGGAGATGCTTCGGGTT TACGAACGAATGTTCAGAAAAGCAGTGTGTACCCTATTAGATGTGGAGATCAGGACCTTGCTTT GCTGCAGAACATGTTGCCTTGTGAGTTAGCTGAATTCCCTTGCCGCTATCTGGGTTTACCGCTT ACCATTAAAAAGCTTTCAAAAATCCAAGTACAACCCATCATTGATAAGATTGCAAATCAACTCT CCGGATGGAAGGCTGAGTTATTGACTAAAGCTGGTCGTAAGGTGCACGTCCAGCATGTTCTCAC AGGGATGGTGATCTACTTGGCCATGGCTGTTGACCTTCCAGCTTGGGCCCTTAAAGCCATTGAT CAGATTCGTCGAGGCTTTCTGTGGCGAGGTCGAAGAGATGTAAAAGGTGGTCACTGTCACGTGG CTTGGGGAATTGTTTGTAGGCCTCGCGAATTGGGTGGTCTAGGCATTTCCAGCATGAAAGAACT TGCTTGGTCTCTTAGAATGAGATGGCTTTGGCTGGCTAAAACTGAGCCATCTCGCCCGTGGGCC TCTCTTGCTATCCAGGTTCCTAAAAAGGTAAAAGATTTCTTCTCCATGGCTATGCAAACTGAGC TTGGTAATGGGGCTACAACCTTTTTCTGGACCGATAGGTGGTTATCGGGTCACAGAATTGCAGA GTTAGCCCCTCGATTATTTGGGATCATCCCTAAGAGACGGGTTAGCAAGAGAACAGTGGTGGAT GCTATCTCTAATCAGAGCTGGATTTCTGACATTCAAGGAGCTCTTTCGGTTGGAATTATCAATG AATTTCTCATTTTGTGGGATTTAATTGACTCAATTGTTTTAAGACCTCAAGTTGAAGACAAACA TTTCTTCCGTCTAGCTGCAAACGGAAAGTTCTCCTCAAAGGAAGCATATAGGGGTTTCTTTTTG GGATCTTCTGAGTTTGAGCCTTTTCATAGAATATGGAAATCTTGGGCTCCCCCAAAAACCAAGT TTTTTATGTGGTTGGTCGCTCACAGGAAGGTTTGGACGGCAGACAGGCTGCAGAAAAGAGGTAT GGACCATCCAGAGAGATGTCCACTATGTGACCAGGATCAAGAAACCTTGGACCATATGTTGATT GGATGTGTTTTTGCTCGTGAATTCTGGTTTAAATTGCTTCTTCAAGTGAACCTGCAGTTTCTTG CCTCCCAATCTGAGGATAGTGCTTTTCTTGAATGGTGGAGAATGTTATGTATCAAAGTCACTGG AATTGCAAGGGATGGCCTCAATTCTCTAGTCATTCTGGGAGTTTGGACCTTATGGAAGCAACGC AATGGATGTGTTTTTGACAATAAGAACCCCAGTATTGCTGATGCTATTAGAAGAGTTGAGTTGG AGGTTCACCTATGGGAGATGGCTGGTGCAAAAAAACTGTCTTTGCTCACCGCCCCCATTCCAGG CATCCCTGCTAGTTAGCTAGCATTGTGGTTATTTGTGTTAGGTTCTTCTTTAGACATGGATGGG TTTCTGTATGCCTGTTACTGGCCGCCATAGGCGCCTCTTTTGTTTTCTTCTGTAATTGTCCTTC TTCTTTAATATAATATCGCGCAGTTCTCCTGCGCTTTCGAGAAAAAAAAACTACCAACTTGCTA TTTTTTTTGCTTCATTCCCGCACATCATTGTGAAGTTGCCCCTTCAAATCCTTTTCAGGTGATC AGTTGGCTATAGCTAAGGAGACTGGCCGGAGACTAGGAATGGGCACAAACATGTATCCTTCTTC ATCATTGCTGGGTGACAAAAAAGGTGACATCGCAGTTCTACCAGTGGACGAATTGATTGAGCAA GCGGATGGATTTGCTGGAGTTTTCCCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.085906106

Conservation Information
Conserved circRNAs	NA
PMCS	0.085906106

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							1016819-1016690(+)
1021104-1016690(+)
1016768-1020985(-)
						
						Potential amino acid sequence
						
							MITGDQLAIAKETGRRLGMGTNMYPSSSLLGDKKGDIAVLPVDELIEQADGFAGVFPGST*(+)
MDLLEFSQEVPEGTKESSGGPWQFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAK
ETGRRLGMGTNMYPSSSLLGDKKGDIAVLPVDELIEQADGFAGVFPGST*(+)
MARRIKEWEKTNKLPRPTRTFLSPFRYFLGKLQQIHPLAQSIRPLVELRCHLFCHPAMMKKDTC
LCPFLVSGQSP*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	1016819-1016690(+) 1021104-1016690(+) 1016768-1020985(-)
Potential amino acid sequence	MITGDQLAIAKETGRRLGMGTNMYPSSSLLGDKKGDIAVLPVDELIEQADGFAGVFPGST(+) MDLLEFSQEVPEGTKESSGGPWQFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAK ETGRRLGMGTNMYPSSSLLGDKKGDIAVLPVDELIEQADGFAGVFPGST(+) MARRIKEWEKTNKLPRPTRTFLSPFRYFLGKLQQIHPLAQSIRPLVELRCHLFCHPAMMKKDTC LCPFLVSGQSP*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d027265_circ_g.2

Address

Any questions?

Supported by