Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | 2_circ_ag.11 |
ID in PlantcircBase | ath_circ_015523 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr2: 12592364-12597195 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | CIRI, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | AT2G29290_circ_g.1 AT2G29290_circ_g.2 2_circ_ag.3 2_circ_ag.4 2_circ_ag.5 2_circ_ag.6 2_circ_ag.7 2_circ_ag.8 2_circ_ag.9 2_circ_ag.10 2_circ_ag.12 2_circ_ag.13 AT2G29340_circ_g.1 AT2G29360_circ_g.1 AT2G29360_circ_g.2 |
Support reads | 34 |
Tissues | root, seed, whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.66526401 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR857 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |