Detailed infomation of each circRNA
General Information | |
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CircRNA Name | 2_circ_ag.12 |
ID in PlantcircBase | ath_circ_015524 |
Alias | At_ciR345 |
Organism | Arabidpsis thaliana |
Position | chr2: 12592659-12597509 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | AT2G29290_circ_g.1 AT2G29290_circ_g.2 2_circ_ag.3 2_circ_ag.4 2_circ_ag.5 2_circ_ag.6 2_circ_ag.7 2_circ_ag.8 2_circ_ag.9 2_circ_ag.10 2_circ_ag.11 2_circ_ag.13 AT2G29340_circ_g.1 AT2G29360_circ_g.1 AT2G29360_circ_g.2 |
Support reads | 13 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.602032007 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR857 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |