Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0310500_circ_g.1 |
ID in PlantcircBase | osa_circ_001502 |
Alias | Os_ciR3494 |
Organism | Oryza sativa |
Position | chr1: 11663795-11664583 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Os01g0310500 |
Parent gene annotation |
Protein kinase, catalytic domain domain containing protein. (Os0 1t0310500-01);Conserved hypothetical protein. (Os01t0310500-02) |
Parent gene strand | + |
Alternative splicing | Os01g0310500_circ_ag.1 EPlOSAG00000025527_circ_ig.1 Os01g0310800_circ_g.1 Os01g0310800_circ_g.2 Os01g0310800_circ_g.3 Os01g0310800_circ_g.4 |
Support reads | 2 |
Tissues | root |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Os01t0310500-01:4 Os01t0310500-02:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.105196451 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |