Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0376500_circ_g.5 |
ID in PlantcircBase | osa_circ_023550 |
Alias | Os_ciR5407 |
Organism | Oryza sativa |
Position | chr4: 18402881-18403387 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Os04g0376500 |
Parent gene annotation |
Similar to Eukaryotic translation initiation factor 3 subunit 3 (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h). (Os04t0376500-01);Simi lar to eukaryotic translation initiation factor 3 subunit 3. (Os 04t0376500-02) |
Parent gene strand | - |
Alternative splicing | Os04g0376500_circ_g.3 Os04g0376500_circ_g.4 Os04g0376500_circ_g.6 |
Support reads | 3 |
Tissues | root |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Os04t0376500-02:2 Os04t0376500-01:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.13642334 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |