circRNA
Detailed infomation of each circRNA
Detail information of 2_circ_ag.14
| General Information | |
|---|---|
| CircRNA Name | 2_circ_ag.14 |
| ID in PlantcircBase | ath_circ_018235 |
| Alias | At_ciR110 |
| Organism | Arabidpsis thaliana |
| Position | chr2: 18185792-18190141 JBrowse» |
| Reference genome | TAIR10.38 |
| Type | ag-circRNA |
| Identification method | CIRI, find_circ |
| Parent gene | NA |
| Parent gene annotation | NA |
| Parent gene strand | NA |
| Alternative splicing | AT2G43910_circ_g.1 AT2G43910_circ_g.2 AT2G43910_circ_g.3 AT2G43910_circ_g.4 AT2G43910_circ_g.5 AT2G43910_circ_g.6 AT2G43910_circ_g.7 AT2G43910_circ_g.8 AT2G43910_circ_g.9 AT2G43910_circ_g.10 AT2G43910_circ_g.11 AT2G43910_circ_g.12 AT2G43910_circ_g.13 2_circ_ag.15 AT2G43910_circ_g.16 2_circ_ag.17 |
| Support reads | 55/37 |
| Tissues | leaf/root, leaf, aerial, inflorescences, whole_plant |
| Exon boundary | Yes-Yes |
| Splicing signals | CT-AC |
| Number of exons covered | NA |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.678281114 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Ye et al., 2015;Chu et al., 2017 |
