| CircRNA Name |
2_circ_ag.15 |
| ID in PlantcircBase |
ath_circ_018236 |
| Alias |
At_ciR2900, Ath_circ_FC1669, Ath_circ_FC1670, Ath_circ_FC1671 |
| Organism |
Arabidpsis thaliana |
| Position |
chr2: 18186410-18190340 JBrowse» |
| Reference genome |
TAIR10.38 |
| Type |
ag-circRNA
|
| Identification method |
CIRI, circRNA_finder, find_circ |
| Parent gene |
NA |
| Parent gene annotation |
NA |
| Parent gene strand |
NA |
| Alternative splicing |
AT2G43910_circ_g.1 AT2G43910_circ_g.2 AT2G43910_circ_g.3 AT2G43910_circ_g.4 AT2G43910_circ_g.5 AT2G43910_circ_g.6 AT2G43910_circ_g.7 AT2G43910_circ_g.8 AT2G43910_circ_g.9 AT2G43910_circ_g.10 AT2G43910_circ_g.11 AT2G43910_circ_g.12 AT2G43910_circ_g.13 2_circ_ag.14 AT2G43910_circ_g.16 2_circ_ag.17 |
| Support reads |
3/61 |
| Tissues |
leaf/root, leaf, aerial, inflorescences, whole_plant |
| Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
| Splicing signals |
CT-AC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
| Number of exons covered |
NA
|
