Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os07g0141400_circ_g.2 |
ID in PlantcircBase | osa_circ_032734 |
Alias | Os07circ01501 |
Organism | Oryza sativa |
Position | chr7: 2137138-2138218 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os07g0141400 |
Parent gene annotation |
Similar to 23 kDa polypeptide of photosystem II. (Os07t0141400-0 1);Similar to 23 kDa polypeptide of photosystem II. (Os07t014140 0-02) |
Parent gene strand | - |
Alternative splicing | Os07g0141400_circ_g.1 Os07g0141400_circ_g.3 Os07g0141400_circ_g.4 Os07g0141400_circ_g.5 Os07g0141400_circ_g.6 Os07g0141400_circ_g.7 Os07g0141400_circ_g.8 Os07g0141400_circ_g.9 Os07g0141400_circ_g.10 Os07g0141400_circ_g.11 Os07g0141400_circ_g.12 Os07g0141400_circ_g.13 Os07g0141400_circ_g.14 Os07g0141400_circ_g.15 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os07t0141400-02:3 Os07t0141400-01:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.396460641 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |