CircRNA Name |
AT1G05010_circ_g.2 |
ID in PlantcircBase |
ath_circ_000756 |
Alias |
Ath_circ_FC0181 |
Organism |
Arabidpsis thaliana |
Position |
chr1: 1432292-1432518 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
e-circRNA
|
Identification method |
CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, circRNA_finder, find_circ, circseq_cup, CIRI-full |
Parent gene |
AT1G05010 |
Parent gene annotation |
1-aminocyclopropane-1-carboxylate oxidase 4 |
Parent gene strand |
- |
Alternative splicing |
AT1G05010_circ_g.1 |
Support reads |
300 |
Tissues |
root, aerial, whole_plant |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
CT-AC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT1G05010.1:1
|