Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os11g0168300_circ_g.3 |
ID in PlantcircBase | osa_circ_008585 |
Alias | NA |
Organism | Oryza sativa |
Position | chr11: 3302411-3302500 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | circRNA_finder |
Parent gene | Os11g0168300 |
Parent gene annotation |
Alba, DNA/RNA-binding protein family protein. (Os11t0168300-01); Alba, DNA/RNA-binding protein family protein. (Os11t0168300-02); Similar to ribonuclease P. (Os11t0168300-03) |
Parent gene strand | + |
Alternative splicing | Os11g0168300_circ_g.1 Os11g0168300_circ_g.4 |
Support reads | 2 |
Tissues | seed |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os11t0168300-01:1 Os11t0168300-03:1 Os11t0168300-02:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.168285185 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |