Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d020038_circ_g.1 |
ID in PlantcircBase | zma_circ_002520 |
Alias | circ1588 |
Organism | Zea mays |
Position | chr7: 87809762-87810747 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d020038 |
Parent gene annotation |
Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-2 0specific; SET domain protein 110 |
Parent gene strand | - |
Alternative splicing | Zm00001d020038_circ_g.2 |
Support reads | 7 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d020038_T007:4 Zm00001d020038_T003:3 Zm00001d020038_T001:3 Zm00001d020038_T004:3 Zm00001d020038_T006:3 Zm00001d020038_T005:3 Zm00001d020038_T002:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.020537441 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |