Plant Circular RNA Database

Detail information of Os07g0409900_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os07g0409900_circ_g.3
					
						ID in PlantcircBase
						osa_circ_033484
					
						Alias
						Os07circ06380/Os_ciR898
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 12797686-12801684  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer, SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os07g0409900						
					
						Parent gene annotation
						
							Plasma membrane-associated calcium-dependent protein kinase, Dir
ect phosphorylation and activation of MAPK, Negative reguration 
of rice immunity (Os07t0409900-01);Similar to Calcium-dependent 
protein kinase. (Os07t0409900-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os07g0409900_circ_g.1 Os07g0409900_circ_g.2 Os07g0409900_circ_g.4 Os07g0409900_circ_g.5 Os07g0409900_circ_g.6 Os07g0409900_circ_g.7 						
					
						Support reads
						6/21/5
					
						Tissues
						leaf and panicle/root/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0409900-01:7
Os07t0409900-02:7

General Information
CircRNA Name	Os07g0409900_circ_g.3
ID in PlantcircBase	osa_circ_033484
Alias	Os07circ06380/Os_ciR898
Organism	Oryza sativa
Position	chr7: 12797686-12801684 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	CIRCexplorer, SMALT, Segemehl, find_circ
Parent gene	Os07g0409900
Parent gene annotation	Plasma membrane-associated calcium-dependent protein kinase, Dir ect phosphorylation and activation of MAPK, Negative reguration of rice immunity (Os07t0409900-01);Similar to Calcium-dependent protein kinase. (Os07t0409900-02)
Parent gene strand	-
Alternative splicing	Os07g0409900_circ_g.1 Os07g0409900_circ_g.2 Os07g0409900_circ_g.4 Os07g0409900_circ_g.5 Os07g0409900_circ_g.6 Os07g0409900_circ_g.7
Support reads	6/21/5
Tissues	leaf and panicle/root/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0409900-01:7 Os07t0409900-02:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATGCCACAGTTCTGTGGTAAAGTAAAAATTTTTGACAAACTTCAAAAATTGACTTACTTGGCT
AGTATCCGGTCAAGTAACTCCCCGCCTTCACATAATctgcttcagttcttccagactaattgtt
ccattcttgtcaacatcaatggcattgaactggtcacgaagatcagacaactcttctgcattta
gtgtagaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 754
Transcript exons: 12797686-12797793,12797882-12797997,12798767-12798893,12
800002-12800171,12800988-12801066,12801137-12801248,1280
1643-12801684
CTGCTTCAGTTCTTCCAGACTAATTGTTCCATTCTTGTCAACATCAATGGCATTGAACTGGTCA
CGAAGATCAGACAACTCTTCTGCATTTAGTGTAGAAGCTAACGCCCGTAAAGCAAATTGCTTAA
ACCGACTGTATTTTACAAACTGACGCATATTATGTAATACAGATATATCTAGAGGTATATCAGA
TGCCTGTCCTCCTTCTCTCACCCATTCATGTGATAATGCCTGAGCAGCAGTTAATCTTGCACGG
GGATCCTTAACAAGCAACTTTTGTACAAAGTCTTTAGCACAAGGAGTGATATTTGGCCAGGGCT
TGCGACGAAAATCTGGCTTGTTTTTCAACACCTCTTTAAATATTCCATCTTCAGTTTTGTCCCA
GAAAGGTCGTCTTCCACACAGTAGAATATAGGTTATTACGCCAATACTCCAAACGTCAGATTCT
GGGCCTGACTTACGCTTAAGCACTTCTGGTGCTACATAGTAGGCACTTCCAACAATGTCACGAA
AGTGTTTCCCTGGTCTTATAAAATCTGAAAGACCAAAATCTGTAGCCTTGAGGGATGAGTCCTC
TTTGGTTGATTTGAAGAGGAAGTTCTCAGGCTTCATGTCCCGATGAACCAAACCATGCAAATGG
CACTCAGCAGCAACCTTGAGCATTTGCCGCACAACTACTGCAGCATCTTTCTCGCTATAACGGC
TATCTTTCTTGGCTAGTATCCGGTCAAGTAACTCCCCGCCTTCACATAAT
						
					

						Genomic sequence
						
							CTGCTTCAGTTCTTCCAGACTAATTGTTCCATTCTTGTCAACATCAATGGCATTGAACTGGTCA
CGAAGATCAGACAACTCTTCTGCATTTAGTGTAGAAGCTAACGCCTACAAGAGATGTAAACATT
TAAAATTGACTCCGAAATCATCCTGAGTCATGGATAAGATTCCCTTAAGTTATGGTATGATAAC
TTACCCGTAAAGCAAATTGCTTAAACCGACTGTATTTTACAAACTGACGCATATTATGTAATAC
AGATATATCTAGAGGTATATCAGATGCCTGTCCTCCTTCTCTCACCCATTCATGTGCTGAAGAA
AATAATATGTAAATTTTCATGTTAGTAGAGCACTGTGATAATAAGATTGTTTATTTTTATACCA
ACAGTATGCCATCTGTGATAACTGATAAATAACCAACTGAACAGCAAATGTTAGTTGCTATGAT
GTAATGAAAACATGAATTAGTTGGTATTGGTTATGTATCAATATTAGATTGTACCAAGCCTTAG
TAACTGAACCAACCATGTCTAACCATGAAAAAACAACATAAGATGTTTCTATCAAATTCAAGGT
ATAAGCTGTTATTTTACGCATGGTAATCAGAAAGTGCTACCATATACATAGCAATAACTTAACA
ATCAAATCGATAAAAGGCAATGGAGGTCTGAATTTCATGAGTAGCAAGCATAGCCACATGGCTT
CAAATAACAAGCCAAAGCTGAACCCCCAGCAGAAGTTAAACAAATAAGTATTAAGCTAACAGGG
AGTATGCACTGCAAACCCATTAATGATCGCTGAGTAAGCCTTTGAGGTTGGACCCTCATACATA
AGTTTCCAACCTGAAGGGGCCCTTCATAAATCCCCTTAGATATATCCCATCTAAGAGTCACCCA
GTAATCAAGTTGTGAATTTGCATGACTGCACTCAGACTTAGCAACAGTTTGCCACTAGAATCCC
ATTATTAAATAACCAGATTTGCAAACTTGCATTCAAGATGTCCCAAAATGATATAGAGTTTCCC
TAATCAGATTATCATACTTAAATTTAAGACATCCAAAAATGATATAAAGTTACATACATAATGC
CTGAGCAGCAGTTAATCTTGCACGGGGATCCTTAACAAGCAACTTTTGTACAAAGTCTTTAGCA
CAAGGAGTGATATTTGGCCAGGGCTTGCGACGAAAATCTGGCTTGTTTTTCAACACCTGCACCA
AAAAGAATATGCCACTTTGTTAGCATTGTGGAAAGAGAAGCGGGGAACAGAGGATGGACACGAT
TTGAGACAAGGTCAGTAATTCCAACATGATACCCAAAGAGAAACATAAATATAAGCAGCCACCA
GGGTAGCGGCTACCCAAGATATACATATTTTTCTTTATGCACAGGCACAGCTAATGTTCCATAG
ACTGCAGGCTTAGCTCCATATAGGTTTAGGTAAGGAGAGAGGGTGAATCATGTAGATTGACTCC
ACATAGATCCTCCTATGCTAGCATTTGTACACATTACGATACTTGTTCTAAGATAGTTCACTCG
GTTCATCCATGGATGCGTGCTTTTCTGGATAGCATATAAACTTGTTGACGCTTGTGGTAAGCTA
TTTCCCAAGTATATAATCAGTGTAAATCTACACGCCTGATATTGTGCCAATGGCAAACTCGTAT
GCTATGAAGTGCACTGCATAGCAAGGTATTTTCATCTTTTCAACAAGTTGGATCATATTTTTCA
GATTTGTCATGACACAGATCACTAGATCAGATATACTTGAGCATAAATCCTGAGAAGATAAAGA
GTTAGTCTTTTTTATCTAAAAAAGGGGAAAGTCTATCTTTGGTCTGTCAACTCTTCATGTAGGT
CAATTTTTGTCTCTCAAGTCAACTCTAAGACAACTTGTCACTCAACAATTGAAATCATGCAAAT
AATGTCCCTATGATTGTTTCTCAAGTGGTTTTAAGTGAGGTGGCTTTCCACATCATTCTGTTTT
GCCATGTCATTTGCCACATCATCTAGACCCATGTGCTGATCCTTCCTCTTCCTTTTTGGACAAG
ATGAAGAGCCACTTAACTGAAACATACCAGCCTAAGATTCTGAATTTCCTTAAAACAGACCAGA
AGTATTTTAAGAATAACATGCGCACTTCCTTGGAAGTATGGACTACTAAAAGTTAGAACGATAT
CAAAGTAATACGGATAATACGGCAACATCGAAGGAAAAAAAGAAGAAAATATAGTGATTGTAAG
GCAAGAAAATAGTTTTAATCAATGAAACACATGTAATAAAATGGTTGTAAGACAAAGATAGTTT
AGGCAAAATGACCTCTTTAAATATTCCATCTTCAGTTTTGTCCCAGAAAGGTCGTCTTCCACAC
AGTAGAATATAGGTTATTACGCCAATACTCCAAACGTCAGATTCTGGGCCTGACTTACGCTTAA
GCACTTCTGGTGCTACATAGTAGGCACTTCCAACAATGTCACGAAAGTGTTTCCCTGTGAGTGC
GGCAACTTAATTTCAATTACACTGAGAATAATTTCTTTATTGAGAAAATTCTTTATATTTGCCC
TCAAAAGTTAGTCGTATCCTTCATTTGCCCATGCGGAACTGCTCAACCCCTCATGCCCATCTTT
CTCAACTTTGTTTCTATATTTGCCCCTCGTATTACTTCTCCATTAGTTTGCTACTTGAATTATG
TGTGAAGTACTTTTTTACCTTCTAATGCCTTCTCAACTGGAAGCAAGGACAATTATCTCTTCTT
TTTTAGTCTTCCTATTTCTAATGTTGTCATTAATAAAAAAAACCAATATCTTTTTAACATGTAG
AGAGTATAACTTTAGCATGTTAGTTTTTTTATAAATGCATAGTAAAATAGCTGTTTTTCTTTTT
AATTGGCTCGGGCCTAAATACCTTTTTCTATGTCTGCTACTAAAATTTGTAAATAGTTTTGTCA
TTTTCTATGCCTGCAGACTTGGTTCTCTAAAAAGAATGTATGTTCTAATAAAAGATGGCGATCA
AGTTTTACTACTACTTATAATTATCAACATTTTTTTATGCACATGGATCGGTGAATGCCCTTTT
TACATTGACAAGGAATTAGAAGGGATTAACATAGAAAATATAATAAGCCATACCTCTAATAGAA
TAGGAATTACTAGAAGGGTAAAAAGGTTTAGTTTCGGGAGAGCAAATAAGGGATATGGCTAACT
TACAAGGCCAAATAGAGATTTTTCTCTTTTATATTTCATATGGAATGGAAGAAAGTTAAACAAG
AAAACAATAGAACAAGTAGTTACAACATACACACAAACCTGGTCTTATAAAATCTGAAAGACCA
AAATCTGTAGCCTTGAGGGATGAGTCCTCTTTGGTTGATTTGAAGAGGAAGTTCTGTAAATACA
CATATCAAATGATCAATTACTCTTATAAGAAGACTTAGTCTTGTACTTTTAGAGCATACCTCAG
GCTTCATGTCCCGATGAACCAAACCATGCAAATGGCACTCAGCAGCAACCTTGAGCATTTGCCG
CACAACTACTGCAGCATCTTTCTCGCTATAACGGCTATCTTTCCTGTAAGAGCAGAACAAATGT
GATATCAGTGAATTTGCTTTCTACATACATCAAATATTCAAACGAACTTAATAATAAATAAAAA
TCTTTGAACATTCAGTCGAAAAAAAATCTTTGAACAATTCCTGACAGTTGATGGCTAGTGGATG
TCTCACATAAACTTATGTCAATCCCTGTAATATTTTGGTTTTATGGTAATAGGAAAACAATATA
TGACTATATGCCATACATCCATATTAAATTCCAAGCTCTTTGTGGCACGAAGCACTAATTGAAA
TGCTCTCCGGTTCAACATCCCTATATTTAGAATAAGTAATCCCAACACAACCAAAAAAGCATGC
CACAGTTCTGTGGTAAAGTAAAAATTTTTGACAAACTTCAAAAATTGACTTACTTGGCTAGTAT
CCGGTCAAGTAACTCCCCGCCTTCACATAAT
						
					

			
		

Sequences
Splice junction sequence	CATGCCACAGTTCTGTGGTAAAGTAAAAATTTTTGACAAACTTCAAAAATTGACTTACTTGGCT AGTATCCGGTCAAGTAACTCCCCGCCTTCACATAATctgcttcagttcttccagactaattgtt ccattcttgtcaacatcaatggcattgaactggtcacgaagatcagacaactcttctgcattta gtgtagaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 754 Transcript exons: 12797686-12797793,12797882-12797997,12798767-12798893,12 800002-12800171,12800988-12801066,12801137-12801248,1280 1643-12801684 CTGCTTCAGTTCTTCCAGACTAATTGTTCCATTCTTGTCAACATCAATGGCATTGAACTGGTCA CGAAGATCAGACAACTCTTCTGCATTTAGTGTAGAAGCTAACGCCCGTAAAGCAAATTGCTTAA ACCGACTGTATTTTACAAACTGACGCATATTATGTAATACAGATATATCTAGAGGTATATCAGA TGCCTGTCCTCCTTCTCTCACCCATTCATGTGATAATGCCTGAGCAGCAGTTAATCTTGCACGG GGATCCTTAACAAGCAACTTTTGTACAAAGTCTTTAGCACAAGGAGTGATATTTGGCCAGGGCT TGCGACGAAAATCTGGCTTGTTTTTCAACACCTCTTTAAATATTCCATCTTCAGTTTTGTCCCA GAAAGGTCGTCTTCCACACAGTAGAATATAGGTTATTACGCCAATACTCCAAACGTCAGATTCT GGGCCTGACTTACGCTTAAGCACTTCTGGTGCTACATAGTAGGCACTTCCAACAATGTCACGAA AGTGTTTCCCTGGTCTTATAAAATCTGAAAGACCAAAATCTGTAGCCTTGAGGGATGAGTCCTC TTTGGTTGATTTGAAGAGGAAGTTCTCAGGCTTCATGTCCCGATGAACCAAACCATGCAAATGG CACTCAGCAGCAACCTTGAGCATTTGCCGCACAACTACTGCAGCATCTTTCTCGCTATAACGGC TATCTTTCTTGGCTAGTATCCGGTCAAGTAACTCCCCGCCTTCACATAAT
Genomic sequence	CTGCTTCAGTTCTTCCAGACTAATTGTTCCATTCTTGTCAACATCAATGGCATTGAACTGGTCA CGAAGATCAGACAACTCTTCTGCATTTAGTGTAGAAGCTAACGCCTACAAGAGATGTAAACATT TAAAATTGACTCCGAAATCATCCTGAGTCATGGATAAGATTCCCTTAAGTTATGGTATGATAAC TTACCCGTAAAGCAAATTGCTTAAACCGACTGTATTTTACAAACTGACGCATATTATGTAATAC AGATATATCTAGAGGTATATCAGATGCCTGTCCTCCTTCTCTCACCCATTCATGTGCTGAAGAA AATAATATGTAAATTTTCATGTTAGTAGAGCACTGTGATAATAAGATTGTTTATTTTTATACCA ACAGTATGCCATCTGTGATAACTGATAAATAACCAACTGAACAGCAAATGTTAGTTGCTATGAT GTAATGAAAACATGAATTAGTTGGTATTGGTTATGTATCAATATTAGATTGTACCAAGCCTTAG TAACTGAACCAACCATGTCTAACCATGAAAAAACAACATAAGATGTTTCTATCAAATTCAAGGT ATAAGCTGTTATTTTACGCATGGTAATCAGAAAGTGCTACCATATACATAGCAATAACTTAACA ATCAAATCGATAAAAGGCAATGGAGGTCTGAATTTCATGAGTAGCAAGCATAGCCACATGGCTT CAAATAACAAGCCAAAGCTGAACCCCCAGCAGAAGTTAAACAAATAAGTATTAAGCTAACAGGG AGTATGCACTGCAAACCCATTAATGATCGCTGAGTAAGCCTTTGAGGTTGGACCCTCATACATA AGTTTCCAACCTGAAGGGGCCCTTCATAAATCCCCTTAGATATATCCCATCTAAGAGTCACCCA GTAATCAAGTTGTGAATTTGCATGACTGCACTCAGACTTAGCAACAGTTTGCCACTAGAATCCC ATTATTAAATAACCAGATTTGCAAACTTGCATTCAAGATGTCCCAAAATGATATAGAGTTTCCC TAATCAGATTATCATACTTAAATTTAAGACATCCAAAAATGATATAAAGTTACATACATAATGC CTGAGCAGCAGTTAATCTTGCACGGGGATCCTTAACAAGCAACTTTTGTACAAAGTCTTTAGCA CAAGGAGTGATATTTGGCCAGGGCTTGCGACGAAAATCTGGCTTGTTTTTCAACACCTGCACCA AAAAGAATATGCCACTTTGTTAGCATTGTGGAAAGAGAAGCGGGGAACAGAGGATGGACACGAT TTGAGACAAGGTCAGTAATTCCAACATGATACCCAAAGAGAAACATAAATATAAGCAGCCACCA GGGTAGCGGCTACCCAAGATATACATATTTTTCTTTATGCACAGGCACAGCTAATGTTCCATAG ACTGCAGGCTTAGCTCCATATAGGTTTAGGTAAGGAGAGAGGGTGAATCATGTAGATTGACTCC ACATAGATCCTCCTATGCTAGCATTTGTACACATTACGATACTTGTTCTAAGATAGTTCACTCG GTTCATCCATGGATGCGTGCTTTTCTGGATAGCATATAAACTTGTTGACGCTTGTGGTAAGCTA TTTCCCAAGTATATAATCAGTGTAAATCTACACGCCTGATATTGTGCCAATGGCAAACTCGTAT GCTATGAAGTGCACTGCATAGCAAGGTATTTTCATCTTTTCAACAAGTTGGATCATATTTTTCA GATTTGTCATGACACAGATCACTAGATCAGATATACTTGAGCATAAATCCTGAGAAGATAAAGA GTTAGTCTTTTTTATCTAAAAAAGGGGAAAGTCTATCTTTGGTCTGTCAACTCTTCATGTAGGT CAATTTTTGTCTCTCAAGTCAACTCTAAGACAACTTGTCACTCAACAATTGAAATCATGCAAAT AATGTCCCTATGATTGTTTCTCAAGTGGTTTTAAGTGAGGTGGCTTTCCACATCATTCTGTTTT GCCATGTCATTTGCCACATCATCTAGACCCATGTGCTGATCCTTCCTCTTCCTTTTTGGACAAG ATGAAGAGCCACTTAACTGAAACATACCAGCCTAAGATTCTGAATTTCCTTAAAACAGACCAGA AGTATTTTAAGAATAACATGCGCACTTCCTTGGAAGTATGGACTACTAAAAGTTAGAACGATAT CAAAGTAATACGGATAATACGGCAACATCGAAGGAAAAAAAGAAGAAAATATAGTGATTGTAAG GCAAGAAAATAGTTTTAATCAATGAAACACATGTAATAAAATGGTTGTAAGACAAAGATAGTTT AGGCAAAATGACCTCTTTAAATATTCCATCTTCAGTTTTGTCCCAGAAAGGTCGTCTTCCACAC AGTAGAATATAGGTTATTACGCCAATACTCCAAACGTCAGATTCTGGGCCTGACTTACGCTTAA GCACTTCTGGTGCTACATAGTAGGCACTTCCAACAATGTCACGAAAGTGTTTCCCTGTGAGTGC GGCAACTTAATTTCAATTACACTGAGAATAATTTCTTTATTGAGAAAATTCTTTATATTTGCCC TCAAAAGTTAGTCGTATCCTTCATTTGCCCATGCGGAACTGCTCAACCCCTCATGCCCATCTTT CTCAACTTTGTTTCTATATTTGCCCCTCGTATTACTTCTCCATTAGTTTGCTACTTGAATTATG TGTGAAGTACTTTTTTACCTTCTAATGCCTTCTCAACTGGAAGCAAGGACAATTATCTCTTCTT TTTTAGTCTTCCTATTTCTAATGTTGTCATTAATAAAAAAAACCAATATCTTTTTAACATGTAG AGAGTATAACTTTAGCATGTTAGTTTTTTTATAAATGCATAGTAAAATAGCTGTTTTTCTTTTT AATTGGCTCGGGCCTAAATACCTTTTTCTATGTCTGCTACTAAAATTTGTAAATAGTTTTGTCA TTTTCTATGCCTGCAGACTTGGTTCTCTAAAAAGAATGTATGTTCTAATAAAAGATGGCGATCA AGTTTTACTACTACTTATAATTATCAACATTTTTTTATGCACATGGATCGGTGAATGCCCTTTT TACATTGACAAGGAATTAGAAGGGATTAACATAGAAAATATAATAAGCCATACCTCTAATAGAA TAGGAATTACTAGAAGGGTAAAAAGGTTTAGTTTCGGGAGAGCAAATAAGGGATATGGCTAACT TACAAGGCCAAATAGAGATTTTTCTCTTTTATATTTCATATGGAATGGAAGAAAGTTAAACAAG AAAACAATAGAACAAGTAGTTACAACATACACACAAACCTGGTCTTATAAAATCTGAAAGACCA AAATCTGTAGCCTTGAGGGATGAGTCCTCTTTGGTTGATTTGAAGAGGAAGTTCTGTAAATACA CATATCAAATGATCAATTACTCTTATAAGAAGACTTAGTCTTGTACTTTTAGAGCATACCTCAG GCTTCATGTCCCGATGAACCAAACCATGCAAATGGCACTCAGCAGCAACCTTGAGCATTTGCCG CACAACTACTGCAGCATCTTTCTCGCTATAACGGCTATCTTTCCTGTAAGAGCAGAACAAATGT GATATCAGTGAATTTGCTTTCTACATACATCAAATATTCAAACGAACTTAATAATAAATAAAAA TCTTTGAACATTCAGTCGAAAAAAAATCTTTGAACAATTCCTGACAGTTGATGGCTAGTGGATG TCTCACATAAACTTATGTCAATCCCTGTAATATTTTGGTTTTATGGTAATAGGAAAACAATATA TGACTATATGCCATACATCCATATTAAATTCCAAGCTCTTTGTGGCACGAAGCACTAATTGAAA TGCTCTCCGGTTCAACATCCCTATATTTAGAATAAGTAATCCCAACACAACCAAAAAAGCATGC CACAGTTCTGTGGTAAAGTAAAAATTTTTGACAAACTTCAAAAATTGACTTACTTGGCTAGTAT CCGGTCAAGTAACTCCCCGCCTTCACATAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_016974 						
					
						PMCS
						0.447309531

Conservation Information
Conserved circRNAs	osi_circ_016974
PMCS	0.447309531

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							12801201-12801678(-)
						
						Potential amino acid sequence
						
							MLKVAAECHLHGLVHRDMKPENFLFKSTKEDSSLKATDFGLSDFIRPGKHFRDIVGSAYYVAPE
VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPNITPCAKDFV
QKLLVKDPRARLTAAQALSHEWVREGGQASDIPLDISVLHNMRQFVKYSRFKQFALRALASTLN
AEELSDLRDQFNAIDVDKNGTISLEELKQIM*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	12801201-12801678(-)
Potential amino acid sequence	MLKVAAECHLHGLVHRDMKPENFLFKSTKEDSSLKATDFGLSDFIRPGKHFRDIVGSAYYVAPE VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPNITPCAKDFV QKLLVKDPRARLTAAQALSHEWVREGGQASDIPLDISVLHNMRQFVKYSRFKQFALRALASTLN AEELSDLRDQFNAIDVDKNGTISLEELKQIM*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os07g0409900_circ_g.3

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