Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G23900_circ_g.1 |
ID in PlantcircBase | ath_circ_004093 |
Alias | At_ciR2742, Ath_circ_FC0497 |
Organism | Arabidpsis thaliana |
Position | chr1: 8441768-8445018 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | AT1G23900 |
Parent gene annotation |
AP-1 complex subunit gamma-1 |
Parent gene strand | + |
Alternative splicing | 1_circ_ag.2 1_circ_ag.3 AT1G23900_circ_g.4 1_circ_ag.5 1_circ_ag.6 AT1G23900_circ_g.7 AT1G23900_circ_g.8 AT1G23900_circ_g.9 AT1G23900_circ_g.10 AT1G23900_circ_g.11 AT1G23900_circ_g.12 AT1G23900_circ_g.13 1_circ_ag.14 1_circ_ag.15 AT1G23935_circ_g.1 AT1G23935_circ_g.2 |
Support reads | 3 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G23900.1:10 AT1G23900.2:10 AT1G23900.3:10 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.134647888 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chen et al., 2017a |