Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d021370_circ_g.5 |
ID in PlantcircBase | zma_circ_009406 |
Alias | Zm07circ00072, zma_circ_0002445, GRMZM5G818058_C2 |
Organism | Zea mays |
Position | chr7: 150112121-150112559 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRI2, find_circ |
Parent gene | Zm00001d021370 |
Parent gene annotation |
Protein CURVATURE THYLAKOID 1B chloroplastic |
Parent gene strand | + |
Alternative splicing | Zm00001d021370_circ_g.1 Zm00001d021370_circ_g.2 Zm00001d021370_circ_g.3 Zm00001d021370_circ_g.4 Zm00001d021370_circ_g.6 Zm00001d021370_circ_g.7 Zm00001d021370_circ_g.8 |
Support reads | NA |
Tissues | leaf, endosperm, root |
Exon boundary | No-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d021370_T001:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.18804355 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019 |