Detail information of Os12g0118800_circ_g.7


General Information
CircRNA Name Os12g0118800_circ_g.7
ID in PlantcircBase osa_circ_010376
Alias NA
Organism Oryza sativa
Position chr12: 923146-926350  JBrowse»
Reference genome IRGSP-1.0.38
Type   i-circRNA
Identification method CIRCexplorer
Parent gene Os12g0118800
Parent gene annotation Ankyrin repeat containing protein. (Os12t0118800-01)
Parent gene strand -
Alternative splicing Os12g0118800_circ_g.1 Os12g0118800_circ_g.2 Os12g0118800_circ_g.3 Os12g0118800_circ_g.4 Os12g0118800_circ_g.5 Os12g0118800_circ_g.6
Support reads 1
Tissues root
Exon boundary   No-No
Splicing signals   CT-AC
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   AAGTAAGCATCACACAAATTTAAAGAAAACGAAACTGGAAAAATCAAAACCCACAGGTATCAGA
AAGCAATGGTAACAATGGGGAAATTTCAGCAATTACaaaatgttcaaggatattattccaaaac
gagaattcagatatctaaacttgcaggtggtggtggttgcaagacacataacagccttcaataa
catcatct
Assembled circRNA sequence   Yes
Full-length trsnacripts Transcript length: 3205
Transcript exons: 923146-926350
AAAATGTTCAAGGATATTATTCCAAAACGAGAATTCAGATATCTAAACTTGCAGGTGGTGGTGG
TTGCAAGACACATAACAGCCTTCAATAACATCATCTCTCGAGACAAACAGTACAGACCATCTGA
AAGTCAACAATGGTGTTTTAAGCACTACATCTACACAAATACTAAGTGGTCAAGAGTTGAATCA
GTAAGTCATTGATTTGGCATGCTGCCAATCTGCCATAGTCAACCAACTCTACTATTCCAAGCTT
GGATTTATTTGCCATCCTTGCTCACCGCAAACAAGACAACACCAAAAAGCCCACTAGGGCCTTG
TCAATAACATCTCATTTGGCTAGATGAACAAACAACCAAGTTGCCCAACTTATACTTTTTGTCT
GGAACCAATGGCACATTACTTGACGACACTACAGTATAACAGCAGAAGAAAATTAAAACAGATC
TTACACAACAGAACAGTGGTATGGCAGCACTATGCCGGCACACGTGTAAAGCAGAATATTGGCA
GGTGAGAGTTGTTTTCGGTACCGTTGCACCTGCTACAAACCAGATCACTTTTTTGGAATTGAAA
GTATAACAGTCTAAACTATACAGATGCTCTATGGTAATCAACTCTAGAATATTGTGGTGTCACA
ATGTTATGTTCTACACTCTGGGGGTATAGATAGTTGCATGGAATTTGCAGTTTCATTGCCATGG
ACCCCAGCAGAGAATTTTTCACTTTTCCTACTACAAATAAAAAAGTAGTAAAGACAAACTATAG
AAGGTTGCCTAATGATAAACGAATCTTAAGTGACACCAAAAGCCAAGGCCTTTTCTCTGCTAGG
CTTGATGTGAGAAGGTGGAGGCTTAACGCTTAAACTATTATTCTCCTATGATAGGTACCATGTG
AACATGTATCGTCACTGCCAACTAAGTTGTGGCATGATGGTAATACCATGATTGTTCAGGTTAA
TCTTTCTTTTCAAGCATCCACTTTTTAAATTTATTGATATATTCATTGTGGCATGATGGCATAT
ATGGATGCTGTGAAATGGCGGGCCTTCGAAACAGACCCAAGTAAAGTTGAACAGAAAATATTAG
AACCCACTCTTCGTGTGCATAGAGACGTGGGGTGAAAGAGGGTCACAATTTTTGACACATGCAT
TCTCACTAAACTTTAACATGCACGTAGAATAAAGCAAATAAATAAGAAAGAAAATAACAATCCG
ACATGTGTTTTGCGTTTTACATGAACATGCCAGGTGAGGAATAGAAGAAATAAATGAGGAAGAA
AAAGAACTGGTCAGCACCAACAAAAGCTTCCATAATGCAGGCCTTCTGGTCATGTAATTTGGGT
CATTATGAGAAGTTGCTTCAGGGTAGTCCAGCTTTTGTTTCGTTCATTTCTTAGAGCTTGAATT
CAATTAAAATATGAAAGACTTGTTGAGAGAACAATATGATGATTCCTAGTCATAGTCATGGTTA
GAGAAAGAATATATAAACTTCCACTCAAACATATATTATTAACAAGGGCAGCATATCCAATATC
AGGTTTCCACTCCAATGGGGCTAAAGACAAACCACCATCACCCTTAACACTATCATCTATTCAT
CTCTACCCTTTTGCAGGTTACCTTGACATAATCTAAGTGCTATTCCCTTTATTAGCCTCATGAT
CTCCCACATAACAACTACGCACCTTCTTGCTCATCTTACCCATTATGTTAGCCCTCAACTTAAA
AAAAAAAAAGAATAGAAGCTGAATATATATGGAGTCATAATTAAAATTGCTGAATACGCATATA
TTCATGAATAAAATTGAAAATATTTACAAAAACTCAAAGACTCAGTTTCCAAGCTAAAAAACTT
GCTTTGCTAAACTTACATGGGGTCCCACTTTAAAAGGTAGCCCAATCCAAGGGAGGGTGCTATT
ATATTTTTATTCTCAAACCATACTTAAGAACAATTGATCTTCCCTACAAATTTTATATGTTCCT
GATCCCAAAAAGATAAACTTACCTTCAATGGACCCCTATGCTCTTCTATAGTTCATGCAAATAT
CAATTCTTGGTTTTTAAAGTGTCGTAAAGGCATCGCCTTTCGCGCCCAAGCACCAGTGGAAGAG
AGCATATTGCTCGCTTAGCCTTCCGCAAGTGCCATGGGGGTACGCACATGTGGGGAGAGCAAGT
GTGGCGTGCACAGTCGAAAGGCTGGTGTGTGAGGGGTGCTAGTGGCCTAGAGATAGAAAAGGAG
AAGGGGGAGATGCAGAGGACCAGCCTGCCTTCCTAACGCCCCTATTTCTCCGACGGGTCTGCTT
CTCCTTCATGCTCTCCACTTCCCCAGCTGTCAACCGTCGCACAGGACAGGTACTTGTTCTTCCC
TCTTCTCTGCTCTGTTTCTTGTTCTATGCTTTGCTCTGCTAGTTTGGAAAGGGCACCTCTTCCC
TCATCTATGTTCTTTTTCTTGCGCTTTGCTCTGCCTCTTTGGACAGGATACATGTCCTTTTTTC
CCTTCTTGCATTCTGCTGCTGAGACTGAAGAGGACCTCTTCCCCTCCTCTTAGATCTTCTTTAG
AAAGGGGAAACGAATGGTACATGGGCTCAATAATTGGTAAGCATGTGTGTAATACAGAAGTTGG
CAACATTGTATAGATTTAGATGTAAGGTGTCACCTTGACTTATGCATTAAACTCGTAGGCATCT
AAAAGATGGTGGGCCACCTTGCTTCGCATTAAGAACACACTGCATCTACTCCCATGTTTCCATA
TATTTTTGACTCATGCATTAGACCTGAACCTAGCAGTATACTACCACTATGCTGGGCCTGCTAT
TCAGCCTCTTGGATTTACATGAAAATGGAGGCTAAAAGATGCCATTAACTGCATGGGTCCAGTT
CTTTTTAACTCCTTTTTATAATATGGATGTGACTAGTTGATACAATGCAGCAGGAGCTCCTCCA
ACTGTTTACATATCACCAAAAAGAAAAAGAAAAGCGATCCACACCCACCACAGCTTTCTAAAAC
AAGGGTAATTCGAGGTTTCACTAGTATATCAAAATCATGGAAGTAAGCATCACACAAATTTAAA
GAAAATGAGTCACTAGTAGATCAAAGTCATGGGAAGTAAGCATCACACAAATTTAAAGAAAACG
AAACTGGAAAAATCAAAACCCACAGGTATCAGAAAGCAATGGTAACAATGGGGAAATTTCAGCA
ATTAC

Genomic sequence AAAATGTTCAAGGATATTATTCCAAAACGAGAATTCAGATATCTAAACTTGCAGGTGGTGGTGG
TTGCAAGACACATAACAGCCTTCAATAACATCATCTCTCGAGACAAACAGTACAGACCATCTGA
AAGTCAACAATGGTGTTTTAAGCACTACATCTACACAAATACTAAGTGGTCAAGAGTTGAATCA
GTAAGTCATTGATTTGGCATGCTGCCAATCTGCCATAGTCAACCAACTCTACTATTCCAAGCTT
GGATTTATTTGCCATCCTTGCTCACCGCAAACAAGACAACACCAAAAAGCCCACTAGGGCCTTG
TCAATAACATCTCATTTGGCTAGATGAACAAACAACCAAGTTGCCCAACTTATACTTTTTGTCT
GGAACCAATGGCACATTACTTGACGACACTACAGTATAACAGCAGAAGAAAATTAAAACAGATC
TTACACAACAGAACAGTGGTATGGCAGCACTATGCCGGCACACGTGTAAAGCAGAATATTGGCA
GGTGAGAGTTGTTTTCGGTACCGTTGCACCTGCTACAAACCAGATCACTTTTTTGGAATTGAAA
GTATAACAGTCTAAACTATACAGATGCTCTATGGTAATCAACTCTAGAATATTGTGGTGTCACA
ATGTTATGTTCTACACTCTGGGGGTATAGATAGTTGCATGGAATTTGCAGTTTCATTGCCATGG
ACCCCAGCAGAGAATTTTTCACTTTTCCTACTACAAATAAAAAAGTAGTAAAGACAAACTATAG
AAGGTTGCCTAATGATAAACGAATCTTAAGTGACACCAAAAGCCAAGGCCTTTTCTCTGCTAGG
CTTGATGTGAGAAGGTGGAGGCTTAACGCTTAAACTATTATTCTCCTATGATAGGTACCATGTG
AACATGTATCGTCACTGCCAACTAAGTTGTGGCATGATGGTAATACCATGATTGTTCAGGTTAA
TCTTTCTTTTCAAGCATCCACTTTTTAAATTTATTGATATATTCATTGTGGCATGATGGCATAT
ATGGATGCTGTGAAATGGCGGGCCTTCGAAACAGACCCAAGTAAAGTTGAACAGAAAATATTAG
AACCCACTCTTCGTGTGCATAGAGACGTGGGGTGAAAGAGGGTCACAATTTTTGACACATGCAT
TCTCACTAAACTTTAACATGCACGTAGAATAAAGCAAATAAATAAGAAAGAAAATAACAATCCG
ACATGTGTTTTGCGTTTTACATGAACATGCCAGGTGAGGAATAGAAGAAATAAATGAGGAAGAA
AAAGAACTGGTCAGCACCAACAAAAGCTTCCATAATGCAGGCCTTCTGGTCATGTAATTTGGGT
CATTATGAGAAGTTGCTTCAGGGTAGTCCAGCTTTTGTTTCGTTCATTTCTTAGAGCTTGAATT
CAATTAAAATATGAAAGACTTGTTGAGAGAACAATATGATGATTCCTAGTCATAGTCATGGTTA
GAGAAAGAATATATAAACTTCCACTCAAACATATATTATTAACAAGGGCAGCATATCCAATATC
AGGTTTCCACTCCAATGGGGCTAAAGACAAACCACCATCACCCTTAACACTATCATCTATTCAT
CTCTACCCTTTTGCAGGTTACCTTGACATAATCTAAGTGCTATTCCCTTTATTAGCCTCATGAT
CTCCCACATAACAACTACGCACCTTCTTGCTCATCTTACCCATTATGTTAGCCCTCAACTTAAA
AAAAAAAAAGAATAGAAGCTGAATATATATGGAGTCATAATTAAAATTGCTGAATACGCATATA
TTCATGAATAAAATTGAAAATATTTACAAAAACTCAAAGACTCAGTTTCCAAGCTAAAAAACTT
GCTTTGCTAAACTTACATGGGGTCCCACTTTAAAAGGTAGCCCAATCCAAGGGAGGGTGCTATT
ATATTTTTATTCTCAAACCATACTTAAGAACAATTGATCTTCCCTACAAATTTTATATGTTCCT
GATCCCAAAAAGATAAACTTACCTTCAATGGACCCCTATGCTCTTCTATAGTTCATGCAAATAT
CAATTCTTGGTTTTTAAAGTGTCGTAAAGGCATCGCCTTTCGCGCCCAAGCACCAGTGGAAGAG
AGCATATTGCTCGCTTAGCCTTCCGCAAGTGCCATGGGGGTACGCACATGTGGGGAGAGCAAGT
GTGGCGTGCACAGTCGAAAGGCTGGTGTGTGAGGGGTGCTAGTGGCCTAGAGATAGAAAAGGAG
AAGGGGGAGATGCAGAGGACCAGCCTGCCTTCCTAACGCCCCTATTTCTCCGACGGGTCTGCTT
CTCCTTCATGCTCTCCACTTCCCCAGCTGTCAACCGTCGCACAGGACAGGTACTTGTTCTTCCC
TCTTCTCTGCTCTGTTTCTTGTTCTATGCTTTGCTCTGCTAGTTTGGAAAGGGCACCTCTTCCC
TCATCTATGTTCTTTTTCTTGCGCTTTGCTCTGCCTCTTTGGACAGGATACATGTCCTTTTTTC
CCTTCTTGCATTCTGCTGCTGAGACTGAAGAGGACCTCTTCCCCTCCTCTTAGATCTTCTTTAG
AAAGGGGAAACGAATGGTACATGGGCTCAATAATTGGTAAGCATGTGTGTAATACAGAAGTTGG
CAACATTGTATAGATTTAGATGTAAGGTGTCACCTTGACTTATGCATTAAACTCGTAGGCATCT
AAAAGATGGTGGGCCACCTTGCTTCGCATTAAGAACACACTGCATCTACTCCCATGTTTCCATA
TATTTTTGACTCATGCATTAGACCTGAACCTAGCAGTATACTACCACTATGCTGGGCCTGCTAT
TCAGCCTCTTGGATTTACATGAAAATGGAGGCTAAAAGATGCCATTAACTGCATGGGTCCAGTT
CTTTTTAACTCCTTTTTATAATATGGATGTGACTAGTTGATACAATGCAGCAGGAGCTCCTCCA
ACTGTTTACATATCACCAAAAAGAAAAAGAAAAGCGATCCACACCCACCACAGCTTTCTAAAAC
AAGGGTAATTCGAGGTTTCACTAGTATATCAAAATCATGGAAGTAAGCATCACACAAATTTAAA
GAAAATGAGTCACTAGTAGATCAAAGTCATGGGAAGTAAGCATCACACAAATTTAAAGAAAACG
AAACTGGAAAAATCAAAACCCACAGGTATCAGAAAGCAATGGTAACAATGGGGAAATTTCAGCA
ATTAC
Conservation Information
Conserved circRNAs NA
PMCS 0.194883983
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017