Plant Circular RNA Database

Detail information of Solyc04g045470.2_circ_g.2

			
						 General Information
					
						CircRNA Name
						Solyc04g045470.2_circ_g.2
					
						ID in PlantcircBase
						sly_circ_001376
					
						Alias
						4:32681500|32686338
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr4: 33533730-33538568  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc04g045470.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Solyc04g045470.2_circ_g.1 Solyc04g045470.2_circ_g.3 Solyc04g045470.2_circ_g.4 						
					
						Support reads
						5
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc04g045470.2.1:4

General Information
CircRNA Name	Solyc04g045470.2_circ_g.2
ID in PlantcircBase	sly_circ_001376
Alias	4:32681500\|32686338
Organism	Solanum lycopersicum
Position	chr4: 33533730-33538568 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc04g045470.2
Parent gene annotation	protein_coding
Parent gene strand	+
Alternative splicing	Solyc04g045470.2_circ_g.1 Solyc04g045470.2_circ_g.3 Solyc04g045470.2_circ_g.4
Support reads	5
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc04g045470.2.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCGTGAAAGAAGTTGGAGAGGAAAATTCAGGCGAAGAGGAAGAGTTATAAGGCCTGGTGCAAAC
CGAGTCGATGGCAAGTGCCCGCTAACTCCACTTGAGatctgtgatgctgtagcagttgcaggac
tactaaatgctactcttgttattccaatttttcatttaaatagcgtatggagagactctaggta
atgtcaga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 660
Transcript exons: 33533730-33533818,33536561-33536758,33538067-33538271,33
538401-33538568
ATCTGTGATGCTGTAGCAGTTGCAGGACTACTAAATGCTACTCTTGTTATTCCAATTTTTCATT
TAAATAGCGTATGGAGAGACTCTAGCAAGTTCTGTGACATATTTGATGAGGACTTCTTCATATA
TGCTCTAAGGAATCATGTGAAGGTGGTACGACAACTCCCTGAAGATATGCTACTGAAGTTTGAC
AATAATATAAGTAGAATTGTTAACTTGAGAGTAAAGGCATGGTCCAGCCCTACCTATTATCTTC
TAAAGGTCCTGCCAAAGCTGAAGGAGTTAGGGGCTGTGCGCATTGCACCGTTTTCTAACAGATT
GGCTCATTCGGTTCCTCCAAACATCCAAGGGTTGCGATGTTTGTGCAACTTTGAAGCACTTAGG
TTTTCCGAACCCATACGGATGCTTGCAGCAAAGATGGTTGATCGAATGGTAAAAAAGAGCTCTA
AAACTAGTGGAAGATATGTTTCGGTGCACATCCGCTTTGAAGAGGACATGGTTGCATTTTCATG
CTGTATTTATGATGGCGGGGAAGAAGAAAAACATGAGATGGATATTGCCCGTGAAAGAAGTTGG
AGAGGAAAATTCAGGCGAAGAGGAAGAGTTATAAGGCCTGGTGCAAACCGAGTCGATGGCAAGT
GCCCGCTAACTCCACTTGAG
						
					

						Genomic sequence
						
							ATCTGTGATGCTGTAGCAGTTGCAGGACTACTAAATGCTACTCTTGTTATTCCAATTTTTCATT
TAAATAGCGTATGGAGAGACTCTAGGTAATGTCAGAATATAGTTGATTCATGGAATTATTGTAA
TTTTTCTCTACTATTGCAAATCTTTATCTATTGATGGATGCAAGAAACAGGTAAATAATTGAGG
GAAAGAAACTTATTTGGACATAGTCCGGAACAAGGATCAGTTATCCGGGGGATGGAATTATTAG
GGACTTTAGGCAATTTTTTTTAAGTTACATGGACTCGAGACTTTAAATAGGTAATACAAACACT
TTTTAAATAGTGATAATGACACATATTTTTAAAACCCACAAGTCTTTTATTTACACCGATCTCT
TCTTCCGCCCTCCACCCCCTCAGTCTCATCCTCCCCCCGTCCATGTCTTTACCACCTCTTAACA
CTTAGCTGATGTTTAAATATCTATCAAACAACTAGCAAATATTTTTATATCTTCAAAACAACTA
GTTGATATTTAAAAAATCCTCGTTTTTTTAACTAGCAATCATAGGATGTTTGAAGCACCTCTTC
AGATAGATATTTAAACATCTTCTGGTTGATTGAACTAAGAAACTTAGTGTTGTTTAAATAGTTC
TCGCTTGTTTAAATATCTCTCGGTTGCTTAACAACTCTTCATTGTTTTTTGACGAAATGAAAAA
TCCTCCAATGTTTTAAACATTTTTCACCTAATATTCTCCACAATATTTGCAACTACACCATATG
GATGTGGTATCTGGAGATCAGTAAGAAATCTTTGCCCTCTGTTTCTTTCCAGAATCAGATTCCA
GGTGGGTAATGGAATGTAGGTGTCATTTTGGGAGGACAAATGGATAACCCAAAGAAACCTGAAA
CAATTATTCCCAATTATTCCCAGACTTATATACACTAATCCTTCAACAAAATGCAACTGTGGCT
AAAATGTTGACAGGACAGGGGTGGAACTTACATCTTAGGAGGAATCTAAATGATTGGGAGATGG
GGAACATAGTGGCTTTCCATGATATAATGGCACAATTTAGTAATCTGACTAGGGAAGAAGACAG
GATTGTGTGGATGATTGGCAGCAAAGGGGTATTCAGTGTCAAGTCAGCTTACAAAGATCTTAAT
CAGTCAAATTCAAATGATAGGATGGAGCTCTGGCCATGGCAGATGATCTGGAGATCTAAAATTC
CATACAAGGTGGACTGTTTCACATGATTACTAGCAAAGGGAGCAGTGCTGAGACAAGAAAATAT
AAAGAAGAGGAATTCCAATTGTGCTCAAGATGCTACTTATATGAGGAACAGGCAAGACAGTCAA
CCATCTCTTTTTGCATTGCAAATGGTCAGATCAATTATGGAGAATATTTTAACAGCCTAAGGAA
GATCACTTGGGTGAAACCAAGGAACATAGTACAACTTCTAAATTGTTGGCTCAATTTGGGCAAT
ACTACAATTAAGGAGGAGAGATGGAAGATTTTCCCAGCTTGTATATGGTGGACAATGTGGAAAG
AAAGGAATCAAAGATGTTTTAAGGGCAAGAAGAACAATTTGCAGAATTTCAAGATGAATTATAT
AGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGGCAGAAGAACTTTTGATGTTT
TAGACTATTTGTGACAAACAGCACAGATGAAGTCTGTTTAGTTTGTAATACTTTTGGAAGGGGG
CTACTTTGATATAGTTTACTTGTGGATAAATAGAAGAAAAAGTTACCGTTCTCAAAAAAAAAAA
AATATCAGAGCGAAGAAGAGAGGAAGATGAAAACTCTGTGAAGAAAAGGAGAATAGCATCCAAG
GGTATGGCCTAATGTCAATGAAGTGGTTGAAAACCCTGAGGCCTCAGATTCGGAACTCAGTGGA
GACAAAAAAACACTAGGTGATTCGTCCCATCTTCCCTAGCCTTGGTGGACAGAGTTATCTAGTA
TCTATTGCTAGTGGAAGGTGACAGATATCCATGGAATTTTTTGAGGAACACGAAAGCTGGTATG
GACACGATCATCAGAAAAAAGAGAAGGAAGGAAGGAGAAGAGAGAAGAAGGTGAAGAAGGGGGG
AAGGAACAAGAAAAGAAGAAAGAAGCTGATGAAGAAAAAGAGAAGGGAAGGAATGAAAATCTGA
AATTTGAAATGTGAATATTTTAATACTTGCTCCCAATGTTTTAAAAAACTTAATTAAGCCTCAA
AGTCACTTAATCAACTTTGACTAGATCAAAGTCCCTTATCCTTCATTCCACTTTTTTTTTTATG
ATCGAGAAATCAGTTTCTGATCTGCCCTTTGGACCAATGACAGTCTTCTAAACTCGGTGGATAA
TGGGCCTGCCCCTCTACCCTTCTCCACTAAAATACCGGGCTTCGCTTTGCATGATGTGGGGCTT
GAACCTGTGCCCTAAGCCACAAATCCTCTACCTTTTGCCACTAGAGCTAGGCCTTAAGAGCTCC
TTCGTTCCATTCTTAAAGGTCCCTGTTTAGCTCATTTTCCCTAGTTATTCAAGTATTATATCAG
TTTGTTCAGTAGTCACTTTCATAGTACTTGTATTCAGCTGAACAGAGTGTGTTTTTTAAGTTTT
ATGTGGCTGATCTACAAATTGAGTTAAAGCATTCAGAGATTCCCAAATTCTTAAATGCTCAGAA
GTTGTAATGTTATTCTTTGTGTTGATTGATTTAACATTTCTGATGTCATAGAGCTCTCCTCTTT
TCAGAAAATATCAGTTCATCCCTTATGTATTGTCGATTTGAAATTTTCCAGAAGTGCTTATTTA
TTGTCATACTTGCAGCAAGTTCTGTGACATATTTGATGAGGACTTCTTCATATATGCTCTAAGG
AATCATGTGAAGGTGGTACGACAACTCCCTGAAGATATGCTACTGAAGTTTGACAATAATATAA
GTAGAATTGTTAACTTGAGAGTAAAGGCATGGTCCAGCCCTACCTATTATCTTCTAAAGGTCCT
GCCAAAGCTGAAGGAGTTAGGGTAGGTGTCTTTTGCCTGTGATCTAATTTGCTTATCCTTTTTG
GTTGCAAAAGTTATTTCTCTTTATGATTCATTTAGATTTTTTCTCCATTATTGTCTCATTGAAT
GATAGATCAGGTGTATATAACTTGTCATACATACTTTGGGGACGAATCCTACTGCTAAAGAAAC
ATCAATATGTGTAGAGAAATCCCATAATAGCAACATTAACATAAAGACTTGTGTTGATTTTTGA
GTATCTGATTATGATCAAGTTTGATCGTAAAGGATTTATCGGATCTAAATGAATCTGCTAAAAT
CAGCTCTGCCAGGCTGTTAATTATTATAGGGAATTAAATCAGGCTGAAACCATCTCTTGATTGT
CTTCTCCCAGAGTTGATGAATAAGGTTCCTAATTTGTTTTTTTCTCTTCTCTCTAAATCTGTAA
TTGTACAGATGAATAAAATAAAGCATTTTGGTACCTTAATTAAGTGGTATTGAAACAACTCTAT
CCATGTGTTGGTCCTTGTTGCGTCCAAATACGCACACTAGTGCTCGCTGTCGTGCAAGTAATAT
AGGATTATGAGTCCAGATATCGTACCCATAGAGATTTGTTGATTAACTATTTACTAAATTAAGC
TAATGCTTATGATTCTAGCAATAAATTCTAAAGTATCATCTTGAATTAACTAAACTAAAAGCAA
AAAAAACAACTAATGAACAAATAACCAAATGAAAAGAAGATAGACATAATCGAATGAGATGAAA
TCGATATAGGGTTATGGATTCCCTAGCAATCAGCCTGAGTAGTCATTTGGTATTACTTATTAAA
TATCTTGTAGGTAAATCTAAGACTATTGACTATCCCTAACACCTAGTTTCACGGAAACAAACTC
CCGCTCTTGTTGCTAACAACTCTTCATTTGTGCTGAGGAATTTAGGTCAAAAAGGGTTATCCGC
GAAAAGAAATACTTGTGTATCTGGAATTTTGCCAGTTACGTATTTTTTATCTTGAGGGTAATTA
ATATTATTGCGATATTGAAAAGTAGGCCACATCAGCTTGCTTTTGCAAGTGACATCTTCCAATT
TTTCTCTAGAATCTACGGTCTCACTGATGATACAACAATCTCCGAAATTCTAGATTCATATAAT
ATGCATTTTATTATGGTCTCATAAGGTGATGAAGTTATCATATGCTCATAAACTTCGGGTTTTA
CCCCTTGCCTCTCTTGCACCATCAATGTGCCAATGTTTCATCTTCTTTTAACCTATTTTTCCTC
GAATCTTTTAAACATGCCACATTTACTTGTGCCTAAGATGAATGTGCAGGGCTGTGCGCATTGC
ACCGTTTTCTAACAGATTGGCTCATTCGGTTCCTCCAAACATCCAAGGGTTGCGATGTTTGTGC
AACTTTGAAGCACTTAGGTTTTCCGAACCCATACGGATGCTTGCAGCAAAGATGGTTGATCGAA
TGGTAAAAAAGAGCTCTAAAACTAGTGGAAGATATGTTTCGGTGCACATCCGCTTTGAAGAGGT
ATTACCCTTTTCATCTTAAACCATGCTTCAATTGTTTATTTTCTTTAAGGGCTACACAGATCAT
CCAAGATTATTTCCTTTTGAAAGTTGAGTCTGCAACTTAAAATTGCTTTTCCTCTTATAATAGG
ACATGGTTGCATTTTCATGCTGTATTTATGATGGCGGGGAAGAAGAAAAACATGAGATGGATAT
TGCCCGTGAAAGAAGTTGGAGAGGAAAATTCAGGCGAAGAGGAAGAGTTATAAGGCCTGGTGCA
AACCGAGTCGATGGCAAGTGCCCGCTAACTCCACTTGAG
						
					

			
		

Sequences
Splice junction sequence	CCGTGAAAGAAGTTGGAGAGGAAAATTCAGGCGAAGAGGAAGAGTTATAAGGCCTGGTGCAAAC CGAGTCGATGGCAAGTGCCCGCTAACTCCACTTGAGatctgtgatgctgtagcagttgcaggac tactaaatgctactcttgttattccaatttttcatttaaatagcgtatggagagactctaggta atgtcaga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 660 Transcript exons: 33533730-33533818,33536561-33536758,33538067-33538271,33 538401-33538568 ATCTGTGATGCTGTAGCAGTTGCAGGACTACTAAATGCTACTCTTGTTATTCCAATTTTTCATT TAAATAGCGTATGGAGAGACTCTAGCAAGTTCTGTGACATATTTGATGAGGACTTCTTCATATA TGCTCTAAGGAATCATGTGAAGGTGGTACGACAACTCCCTGAAGATATGCTACTGAAGTTTGAC AATAATATAAGTAGAATTGTTAACTTGAGAGTAAAGGCATGGTCCAGCCCTACCTATTATCTTC TAAAGGTCCTGCCAAAGCTGAAGGAGTTAGGGGCTGTGCGCATTGCACCGTTTTCTAACAGATT GGCTCATTCGGTTCCTCCAAACATCCAAGGGTTGCGATGTTTGTGCAACTTTGAAGCACTTAGG TTTTCCGAACCCATACGGATGCTTGCAGCAAAGATGGTTGATCGAATGGTAAAAAAGAGCTCTA AAACTAGTGGAAGATATGTTTCGGTGCACATCCGCTTTGAAGAGGACATGGTTGCATTTTCATG CTGTATTTATGATGGCGGGGAAGAAGAAAAACATGAGATGGATATTGCCCGTGAAAGAAGTTGG AGAGGAAAATTCAGGCGAAGAGGAAGAGTTATAAGGCCTGGTGCAAACCGAGTCGATGGCAAGT GCCCGCTAACTCCACTTGAG
Genomic sequence	ATCTGTGATGCTGTAGCAGTTGCAGGACTACTAAATGCTACTCTTGTTATTCCAATTTTTCATT TAAATAGCGTATGGAGAGACTCTAGGTAATGTCAGAATATAGTTGATTCATGGAATTATTGTAA TTTTTCTCTACTATTGCAAATCTTTATCTATTGATGGATGCAAGAAACAGGTAAATAATTGAGG GAAAGAAACTTATTTGGACATAGTCCGGAACAAGGATCAGTTATCCGGGGGATGGAATTATTAG GGACTTTAGGCAATTTTTTTTAAGTTACATGGACTCGAGACTTTAAATAGGTAATACAAACACT TTTTAAATAGTGATAATGACACATATTTTTAAAACCCACAAGTCTTTTATTTACACCGATCTCT TCTTCCGCCCTCCACCCCCTCAGTCTCATCCTCCCCCCGTCCATGTCTTTACCACCTCTTAACA CTTAGCTGATGTTTAAATATCTATCAAACAACTAGCAAATATTTTTATATCTTCAAAACAACTA GTTGATATTTAAAAAATCCTCGTTTTTTTAACTAGCAATCATAGGATGTTTGAAGCACCTCTTC AGATAGATATTTAAACATCTTCTGGTTGATTGAACTAAGAAACTTAGTGTTGTTTAAATAGTTC TCGCTTGTTTAAATATCTCTCGGTTGCTTAACAACTCTTCATTGTTTTTTGACGAAATGAAAAA TCCTCCAATGTTTTAAACATTTTTCACCTAATATTCTCCACAATATTTGCAACTACACCATATG GATGTGGTATCTGGAGATCAGTAAGAAATCTTTGCCCTCTGTTTCTTTCCAGAATCAGATTCCA GGTGGGTAATGGAATGTAGGTGTCATTTTGGGAGGACAAATGGATAACCCAAAGAAACCTGAAA CAATTATTCCCAATTATTCCCAGACTTATATACACTAATCCTTCAACAAAATGCAACTGTGGCT AAAATGTTGACAGGACAGGGGTGGAACTTACATCTTAGGAGGAATCTAAATGATTGGGAGATGG GGAACATAGTGGCTTTCCATGATATAATGGCACAATTTAGTAATCTGACTAGGGAAGAAGACAG GATTGTGTGGATGATTGGCAGCAAAGGGGTATTCAGTGTCAAGTCAGCTTACAAAGATCTTAAT CAGTCAAATTCAAATGATAGGATGGAGCTCTGGCCATGGCAGATGATCTGGAGATCTAAAATTC CATACAAGGTGGACTGTTTCACATGATTACTAGCAAAGGGAGCAGTGCTGAGACAAGAAAATAT AAAGAAGAGGAATTCCAATTGTGCTCAAGATGCTACTTATATGAGGAACAGGCAAGACAGTCAA CCATCTCTTTTTGCATTGCAAATGGTCAGATCAATTATGGAGAATATTTTAACAGCCTAAGGAA GATCACTTGGGTGAAACCAAGGAACATAGTACAACTTCTAAATTGTTGGCTCAATTTGGGCAAT ACTACAATTAAGGAGGAGAGATGGAAGATTTTCCCAGCTTGTATATGGTGGACAATGTGGAAAG AAAGGAATCAAAGATGTTTTAAGGGCAAGAAGAACAATTTGCAGAATTTCAAGATGAATTATAT AGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGGCAGAAGAACTTTTGATGTTT TAGACTATTTGTGACAAACAGCACAGATGAAGTCTGTTTAGTTTGTAATACTTTTGGAAGGGGG CTACTTTGATATAGTTTACTTGTGGATAAATAGAAGAAAAAGTTACCGTTCTCAAAAAAAAAAA AATATCAGAGCGAAGAAGAGAGGAAGATGAAAACTCTGTGAAGAAAAGGAGAATAGCATCCAAG GGTATGGCCTAATGTCAATGAAGTGGTTGAAAACCCTGAGGCCTCAGATTCGGAACTCAGTGGA GACAAAAAAACACTAGGTGATTCGTCCCATCTTCCCTAGCCTTGGTGGACAGAGTTATCTAGTA TCTATTGCTAGTGGAAGGTGACAGATATCCATGGAATTTTTTGAGGAACACGAAAGCTGGTATG GACACGATCATCAGAAAAAAGAGAAGGAAGGAAGGAGAAGAGAGAAGAAGGTGAAGAAGGGGGG AAGGAACAAGAAAAGAAGAAAGAAGCTGATGAAGAAAAAGAGAAGGGAAGGAATGAAAATCTGA AATTTGAAATGTGAATATTTTAATACTTGCTCCCAATGTTTTAAAAAACTTAATTAAGCCTCAA AGTCACTTAATCAACTTTGACTAGATCAAAGTCCCTTATCCTTCATTCCACTTTTTTTTTTATG ATCGAGAAATCAGTTTCTGATCTGCCCTTTGGACCAATGACAGTCTTCTAAACTCGGTGGATAA TGGGCCTGCCCCTCTACCCTTCTCCACTAAAATACCGGGCTTCGCTTTGCATGATGTGGGGCTT GAACCTGTGCCCTAAGCCACAAATCCTCTACCTTTTGCCACTAGAGCTAGGCCTTAAGAGCTCC TTCGTTCCATTCTTAAAGGTCCCTGTTTAGCTCATTTTCCCTAGTTATTCAAGTATTATATCAG TTTGTTCAGTAGTCACTTTCATAGTACTTGTATTCAGCTGAACAGAGTGTGTTTTTTAAGTTTT ATGTGGCTGATCTACAAATTGAGTTAAAGCATTCAGAGATTCCCAAATTCTTAAATGCTCAGAA GTTGTAATGTTATTCTTTGTGTTGATTGATTTAACATTTCTGATGTCATAGAGCTCTCCTCTTT TCAGAAAATATCAGTTCATCCCTTATGTATTGTCGATTTGAAATTTTCCAGAAGTGCTTATTTA TTGTCATACTTGCAGCAAGTTCTGTGACATATTTGATGAGGACTTCTTCATATATGCTCTAAGG AATCATGTGAAGGTGGTACGACAACTCCCTGAAGATATGCTACTGAAGTTTGACAATAATATAA GTAGAATTGTTAACTTGAGAGTAAAGGCATGGTCCAGCCCTACCTATTATCTTCTAAAGGTCCT GCCAAAGCTGAAGGAGTTAGGGTAGGTGTCTTTTGCCTGTGATCTAATTTGCTTATCCTTTTTG GTTGCAAAAGTTATTTCTCTTTATGATTCATTTAGATTTTTTCTCCATTATTGTCTCATTGAAT GATAGATCAGGTGTATATAACTTGTCATACATACTTTGGGGACGAATCCTACTGCTAAAGAAAC ATCAATATGTGTAGAGAAATCCCATAATAGCAACATTAACATAAAGACTTGTGTTGATTTTTGA GTATCTGATTATGATCAAGTTTGATCGTAAAGGATTTATCGGATCTAAATGAATCTGCTAAAAT CAGCTCTGCCAGGCTGTTAATTATTATAGGGAATTAAATCAGGCTGAAACCATCTCTTGATTGT CTTCTCCCAGAGTTGATGAATAAGGTTCCTAATTTGTTTTTTTCTCTTCTCTCTAAATCTGTAA TTGTACAGATGAATAAAATAAAGCATTTTGGTACCTTAATTAAGTGGTATTGAAACAACTCTAT CCATGTGTTGGTCCTTGTTGCGTCCAAATACGCACACTAGTGCTCGCTGTCGTGCAAGTAATAT AGGATTATGAGTCCAGATATCGTACCCATAGAGATTTGTTGATTAACTATTTACTAAATTAAGC TAATGCTTATGATTCTAGCAATAAATTCTAAAGTATCATCTTGAATTAACTAAACTAAAAGCAA AAAAAACAACTAATGAACAAATAACCAAATGAAAAGAAGATAGACATAATCGAATGAGATGAAA TCGATATAGGGTTATGGATTCCCTAGCAATCAGCCTGAGTAGTCATTTGGTATTACTTATTAAA TATCTTGTAGGTAAATCTAAGACTATTGACTATCCCTAACACCTAGTTTCACGGAAACAAACTC CCGCTCTTGTTGCTAACAACTCTTCATTTGTGCTGAGGAATTTAGGTCAAAAAGGGTTATCCGC GAAAAGAAATACTTGTGTATCTGGAATTTTGCCAGTTACGTATTTTTTATCTTGAGGGTAATTA ATATTATTGCGATATTGAAAAGTAGGCCACATCAGCTTGCTTTTGCAAGTGACATCTTCCAATT TTTCTCTAGAATCTACGGTCTCACTGATGATACAACAATCTCCGAAATTCTAGATTCATATAAT ATGCATTTTATTATGGTCTCATAAGGTGATGAAGTTATCATATGCTCATAAACTTCGGGTTTTA CCCCTTGCCTCTCTTGCACCATCAATGTGCCAATGTTTCATCTTCTTTTAACCTATTTTTCCTC GAATCTTTTAAACATGCCACATTTACTTGTGCCTAAGATGAATGTGCAGGGCTGTGCGCATTGC ACCGTTTTCTAACAGATTGGCTCATTCGGTTCCTCCAAACATCCAAGGGTTGCGATGTTTGTGC AACTTTGAAGCACTTAGGTTTTCCGAACCCATACGGATGCTTGCAGCAAAGATGGTTGATCGAA TGGTAAAAAAGAGCTCTAAAACTAGTGGAAGATATGTTTCGGTGCACATCCGCTTTGAAGAGGT ATTACCCTTTTCATCTTAAACCATGCTTCAATTGTTTATTTTCTTTAAGGGCTACACAGATCAT CCAAGATTATTTCCTTTTGAAAGTTGAGTCTGCAACTTAAAATTGCTTTTCCTCTTATAATAGG ACATGGTTGCATTTTCATGCTGTATTTATGATGGCGGGGAAGAAGAAAAACATGAGATGGATAT TGCCCGTGAAAGAAGTTGGAGAGGAAAATTCAGGCGAAGAGGAAGAGTTATAAGGCCTGGTGCA AACCGAGTCGATGGCAAGTGCCCGCTAACTCCACTTGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.518105984

Conservation Information
Conserved circRNAs	NA
PMCS	0.518105984

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							33536647-33538565(+)
						
						Potential amino acid sequence
						
							MLLKFDNNISRIVNLRVKAWSSPTYYLLKVLPKLKELGAVRIAPFSNRLAHSVPPNIQGLRCLC
NFEALRFSEPIRMLAAKMVDRMVKKSSKTSGRYVSVHIRFEEDMVAFSCCIYDGGEEEKHEMDI
ARERSWRGKFRRRGRVIRPGANRVDGKCPLTPLEICDAVAVAGLLNATLVIPIFHLNSVWRDSS
KFCDIFDEDFFIYALRNHVKVVRQLPEDMLLKFDNNISRIVNLRVKAWSSPTYYLLKVLPKLKE
LGAVRIAPFSNRLAHSVPPNIQGLRCLCNFEALRFSEPIRMLAAKMVDRMVKKSSKTSGRYVSV
HIRFEEDMVAFSCCIYDGGEEEKHEMDIARERSWRGKFRRRGRVIRPGANRVDGKCPLTPLEIC
DAVAVAGLLNATLVIPIFHLNSVWRDSSKFCDIFDEDFFIYALRNHVKVVRQLPEDMLLKFDNN
ISRIVNLRVKAWSSPTYYLLKVLPKLKELGAVRIAPFSNRLAHSVPPNIQGLRCLCNFEALRFS
EPIRMLAAKMVDRMVKKSSKTSGRYVSVHIRFEEDMVAFSCCIYDGGEEEKHEMDIARERSWRG
KFRRRGRVIRPGANRVDGKCPLTPLEICDAVAVAGLLNATLVIPIFHLNSVWRDSSKFCDIFDE
DFFIYALRNHVKVVRQLPEDMLLKFDNNISRIVNLRVKAWSSPTYYLLKVLPKLKELGAVRIAP
FSNRLAHSVPPNIQGLRCLCNFEALRFSEPIRMLAAKMVDRMVKKSSKTSGRYVSVHIRFEEDM
VAFSCCIYDGGEEEKHEMDIARERSWRGKFRRRGRVIRPGANRVDGKCPLTPLE(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	33536647-33538565(+)
Potential amino acid sequence	MLLKFDNNISRIVNLRVKAWSSPTYYLLKVLPKLKELGAVRIAPFSNRLAHSVPPNIQGLRCLC NFEALRFSEPIRMLAAKMVDRMVKKSSKTSGRYVSVHIRFEEDMVAFSCCIYDGGEEEKHEMDI ARERSWRGKFRRRGRVIRPGANRVDGKCPLTPLEICDAVAVAGLLNATLVIPIFHLNSVWRDSS KFCDIFDEDFFIYALRNHVKVVRQLPEDMLLKFDNNISRIVNLRVKAWSSPTYYLLKVLPKLKE LGAVRIAPFSNRLAHSVPPNIQGLRCLCNFEALRFSEPIRMLAAKMVDRMVKKSSKTSGRYVSV HIRFEEDMVAFSCCIYDGGEEEKHEMDIARERSWRGKFRRRGRVIRPGANRVDGKCPLTPLEIC DAVAVAGLLNATLVIPIFHLNSVWRDSSKFCDIFDEDFFIYALRNHVKVVRQLPEDMLLKFDNN ISRIVNLRVKAWSSPTYYLLKVLPKLKELGAVRIAPFSNRLAHSVPPNIQGLRCLCNFEALRFS EPIRMLAAKMVDRMVKKSSKTSGRYVSVHIRFEEDMVAFSCCIYDGGEEEKHEMDIARERSWRG KFRRRGRVIRPGANRVDGKCPLTPLEICDAVAVAGLLNATLVIPIFHLNSVWRDSSKFCDIFDE DFFIYALRNHVKVVRQLPEDMLLKFDNNISRIVNLRVKAWSSPTYYLLKVLPKLKELGAVRIAP FSNRLAHSVPPNIQGLRCLCNFEALRFSEPIRMLAAKMVDRMVKKSSKTSGRYVSVHIRFEEDM VAFSCCIYDGGEEEKHEMDIARERSWRGKFRRRGRVIRPGANRVDGKCPLTPLE(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Yin et al., 2018

circRNA

Detail information of Solyc04g045470.2_circ_g.2

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