Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G02840_circ_g.3 |
ID in PlantcircBase | ath_circ_000331 |
Alias | At_ciR2139, Ath_circ_FC0148, Ath_circ_FC0149 |
Organism | Arabidpsis thaliana |
Position | chr1: 627835-628469 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | AT1G02840 |
Parent gene annotation |
Serine/arginine-rich-splicing factor SR34 |
Parent gene strand | + |
Alternative splicing | AT1G02840_circ_g.2 AT1G02840_circ_g.4 AT1G02840_circ_g.5 |
Support reads | 4 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G02840.2:4 AT1G02840.3:4 AT1G02840.5:4 AT1G02840.4:4 AT1G02840.1:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.257537581 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chen et al., 2017a |