Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G02840_circ_g.4 |
ID in PlantcircBase | ath_circ_000332 |
Alias | At_ciR5564, AT1G02840_C1 |
Organism | Arabidpsis thaliana |
Position | chr1: 628246-628469 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ, CIRI-full, CIRI2 |
Parent gene | AT1G02840 |
Parent gene annotation |
Serine/arginine-rich-splicing factor SR34 |
Parent gene strand | + |
Alternative splicing | AT1G02840_circ_g.2 AT1G02840_circ_g.3 AT1G02840_circ_g.5 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G02840.1:1 AT1G02840.4:1 AT1G02840.2:1 AT1G02840.3:1 AT1G02840.5:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.515832444 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | response to drought stress |
Other Information | |
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References | Ye et al., 2015;Zhang et al., 2019 |