Plant Circular RNA Database

Detail information of GLYMA_10G173000_circ_g.2

			
						 General Information
					
						CircRNA Name
						GLYMA_10G173000_circ_g.2
					
						ID in PlantcircBase
						gma_circ_002700
					
						Alias
						Gm10circRNA345
					
						Organism
						
							Glycine max						
					
						Position
						
							chr10: 40690146-40694467  JBrowse»						
					
						Reference genome
						
							v2.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						Tophat
					
						Parent gene
						
							GLYMA_10G173000						
					
						Parent gene annotation
						
							hypothetical protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							GLYMA_10G173000_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, stem
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						KRH34259:3
KRH34263:3
KRH34262:3
KRH34260:3
KRH34261:3

General Information
CircRNA Name	GLYMA_10G173000_circ_g.2
ID in PlantcircBase	gma_circ_002700
Alias	Gm10circRNA345
Organism	Glycine max
Position	chr10: 40690146-40694467 JBrowse»
Reference genome	v2.0.38
Type	e-circRNA
Identification method	Tophat
Parent gene	GLYMA_10G173000
Parent gene annotation	hypothetical protein
Parent gene strand	+
Alternative splicing	GLYMA_10G173000_circ_g.1
Support reads	NA
Tissues	leaf, stem
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	KRH34259:3 KRH34263:3 KRH34262:3 KRH34260:3 KRH34261:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCTAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGA
TTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGggcacaactgattcccagtttattgtgg
acaaaaagaattcaaataacttgcaacaagatgagttcacatcacaagtaggtagtaatgacat
accaaaga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 507
Transcript exons: 40690146-40690420,40694130-40694266,40694373-40694467
GGCACAACTGATTCCCAGTTTATTGTGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGT
TCACATCACAAGTAGGTAGTAATGACATACCAAAGAGTGAGAAAAGAAATGGATCAGTTGCTGA
AGCAACACCATCTACTTTAGAGAATGATGTGGGAACAAGCAAAGTTAAAACTCAATCAGTGAAA
CTTGGTAAAACCCAAAGTGGACCCCTGATGCCAGGCTTAGTGCTTGGCCATTCTTCATCTGAAA
GAGGGCGTACATTTGAAAGGTTTGAGAATGAAAATCAGTTATTGGGTGAGAAAAGTAATCGTGA
TATACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGT
TTATCAGCCCCAATCAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTA
ATCTAGTGCAAATTAAAGGACGATTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAG
						
					

						Genomic sequence
						
							GGCACAACTGATTCCCAGTTTATTGTGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGT
TCACATCACAAGTAGGTAGTAATGACATACCAAAGAGTGAGAAAAGAAATGGATCAGTTGCTGA
AGCAACACCATCTACTTTAGAGAATGATGTGGGAACAAGCAAAGTTAAAACTCAATCAGTGAAA
CTTGGTAAAACCCAAAGTGGACCCCTGATGCCAGGCTTAGTGCTTGGCCATTCTTCATCTGAAA
GAGGGCGTACATTTGAAAGGTACATTGTATTTGCATATTATATCTTTGTTGTTGTTTTTATATT
AGGCTGTTGTTGGAAGTTCCAGAGAGAATGAAATGAAAAAGGAAAGGGAGAGAAGGGAAGGAAT
GGAAAGCAATTGCCTTCCCTATGTTTGATGACTAAAGATGAAAGGAAGTGTAAGTTGAATAAGG
TGGTCCAGTGCATGAGGTTCCCACCTAGTGGGGTCCGGGGAGGGTATATGTAATTATGTATGCA
GCCTTACCTTCACAAGCTGATATACTGTTTCTAGGATTTGAACCTGTGATCTTCAGGTCTCAAA
GCAGCAACCTTACCACTACCTAAGCTTATCCTCGAAAGAGTGAGCTAAAGAGTTATAATTATAA
GTGCAAAATTTCAACATAACCCTACCAAACTTTTTGGAACTTCTCAATTTATTGCGTAAAATAG
TAAATGAGGTAGTTTTCAAAATAAAATTAAAGCTATTCTCCTTCATTACCCTGTTTCCCCTCAA
AATTTGGAGAGAATAAAAGATGACTTTTTGTAACTTCTCAATTTATTGCATAAAATAGTAAATG
AGGTAGTTTTCAAAATAAAATTAAAGCTATTCTGCTTCATTACCCTGTTTCCCATCAAAATTTG
GAGAGAGTAAAAGATGAGTTTTCAGAGGGGGAATAATTCCCCCTCATATGATGCCCTTGCGGCC
TTGCCTTCATATTGTTTTAATACTCAAGGAGCTATTTCCTTTCCATGGTAATCATTGTTCCTTG
TACAATTAGGCTCTTAGTTGAGGAAAGATAAAAACAAGTAGGCTTTGATGTGTTTGTTAGTGTT
GAAAATATGTTGTTTTATATAAAATATGGGACCCACGACCTGGTACTTAATTATTTTGTGATTT
TGAGATATTTTTTTTGGTTTGCCATGACTTTTCAGACTTGGAACTTTTTTGTGCTTGCTAAATT
TGTTGAAAGTGTTGGTCCAAGAAGTCAAGGTAATCAGTTTCTGAGTTTGAAGGACAAAAGTAAC
ACTTGGAAGTTACCAGTTTTCTCAGTAAACTAATACCATCAAATAAACTGTATATATAGGTTAA
AAAATAAATACCCTAAGAAAAGAAGTTTGCTACATTATATATCTAAAGAGATGGAGCATTTACT
AACAAGACTAGCTCAAAGTATTATCAGTGGAGGATGAGTTGGTTATATTGGTTTATATCTTTGA
AAGCATTTCATTTTTAAATTCTTTTTTGGTTTGAGCCTGTGTGGAAAAGACCTGTAGAAGCCCT
AGTAAGGAAAATAGTTTAGATGGAGGGTAACCCTATTGTTAGAGGTAGAAGAGTCCGAGAAAAA
CAATAGGCAAACTCGTTATTAAGATGGATTTAGAGGTCAATGGTTTGTCTATTAATACGAATCA
CAATAGAATATTATGTTGTCGTTTGATTCATGTAGCCGATCCTAATATGAAAAGGCTTGGTTGT
TGTCGTCGTTAAAGATTGTAGAACTAAATGATGCTAAAATATTTTATATGGAGAGTTTTGTAAA
GGTGATTCACCTTTATATTAGTATGGAATAAAGATAATAAGTAAGGCAATATATGGGTTGAGCT
GTTCATAAACTTTTTAAGCTTGACTTGTTAAATGTTCAAATAAACTTGTTTGTTCAACTAAACA
AAGAAGCTCAAGTTTTTTTCAATTCAGATTTGTTATATATAGGATTGACTTTAAAACTCATAAA
TAGCTTGTGTGTTTTTTGTATCAATGGCAAAAAAAAATAATTTAATTTTAGATAAGACAATGCA
TAAACAATATATATTACTACTTAGTAAATTATTAATCCATCTTGAGAATTGTAATTTTATTTAT
TGCTACTACATTGTTCAAAACGTTTTGCACTTTCTTCATATTTTTTTCTTCATCTTCTAGAGCG
ATTCTTGTGTCAGCATAGTGCCTATTAGGCACAACCAATTGAAAGCTCCGGATGTGTTAGAATA
ATAATAAAGTTTGTGTTGAAACTATTTAACTATTCTAAGCTTTTGATTGGTTATGCCTATAGGC
ATTGCACTCATGCAAGAACTGCTCCATCTTCCAGCATAATATGCCTACTGAAAATGATGTCAAA
AAACATAAAAAGTTGCTTCATAGAGATATTTGGTACAGAGGGGAAAAAAATCTATAAATGAGCT
AATGATGGCGAACTCAGTTTATATTTTAAGGTTGAATTACTATTTTGGTCCTCTAATTTATTTT
TTAGGTTCAATTTAGTCCTCTTATTATTTGAAGGGTCAATTAAGTCCTGCAATTTTTAAAAAAG
GTTCAGTTAGGCTCCTTTATTTTTGAAAGTTTCGATTAGGTCCCTTGTTTTAAAAATGAGTTCA
ATTTGGTCCCATTGAAAACCAAATTTGATCCTATCTTCTAAAATTTCCAGAGCAGATGGAAGAA
AAATGAGACCAAATTGAATCCATTTTAAAAAATAAAGGACCTAATTGAACATTTTAAAAGTAAA
GAGACCTAATTGAACCATTTTAAAAAATTACAGGGTCTATTGAACCTTTTAATAATAAGTGGAC
CAAATTGAATCTAAAAAACAAATTAGAGAACCAAAATAGTAATTTAAACTTTTTTAAAACAAGG
CAAACCCAAGTTTTTAAATTTAATTTGTTTAAATAAATGAATCTCAAGTCAAGTTGGAGGTTCA
AGTGCTCGGCCTGGCTCTACTTAAAACTTTCCTAACAAGATAAGGAAACTACACACATGTCAAT
TAATCTCAGGTGTCAAATTTTGTAAAACCACACCTCCAATAACTTTTTACCAAAAATAAACTTA
TTCAATCTAACTGTTAAATTAAAAGTTCATATGAGATGGATATAGTCTAAAACATTTCATACAA
TTTCTAATTCAATTGATACTTCATTGCATGATTTTTATTATAACATAAAACATCCTATTCAAAA
TATAGGTAAATAGTTACTTTTAGATTACATCTCTATGAATGTTTAAATCATGTGAAACACTACT
ATTCTAAGAAGATAATTTTATGATTCTTAATTTCATATTACAAAAGTATTATGTTAATTTTAAT
ATGCACAGATGACGGATGAGGTATTAAATAATTTTGGATTAATCTAAAAGTTTGCAAATATAAT
ATATATAATAGGAACTTTTAATCTAATGATAGATTTTAGGATAATATTGTCCAATAAAAAGTTA
GAGGTGTAAGAGTGAGTGTAACTCACATAAGTGTAAGTTGATCCCTCCTTTCTCTCTTTCACAT
ACAAGCGCACATGTGTGCCCACACACATGCGCTAGGTTTGGGTACATTCTCCATTTGGAATTGC
AGCTGATAGTGTGGAATTGAAAAATAATTATTGTATTGTTTATCAATGGTTAATGGTACCATTC
TTCTGTCATAGCTTGTAATTTAGGAAGTACTTTTGGTGACCTATAAACATGGCAATCAATCACG
ATTATTTTATTTTCATTGAGTTCTAGTAAGTTCAAAGTCTACCTTCGTAAAGTGTGTATTTTCT
GGAGAATCTTCTTTATGCCTTCTATATTTCTTGATTTGTCTATAAATATTTTATGTATAAGTGT
AATTTGAATTTTGAATAAATAAATTCAATGTTGTGTGTGTCTTTCTGGTTTTGTCCTTTATGCT
GCCTGGTGATTGAGGTTTTCTTGTTATCACCAGCATAACCATTTGCTTGTTAAAATTTGTAATG
CTTTATTACTTTTTAGGTTTGAGAATGAAAATCAGTTATTGGGTGAGAAAAGTAATCGTGATAT
ACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTA
TCAGCCCCAATCAAATCTTCTGGAGGTATTTGAATCATCATGTACACCGTAAGGCTGTGTGCTA
GTTTTAGTATTTTTCAACCAGCCTCTTAAACACTTGGTTTTGATTTTGTTCACCCAACTCTTGC
TAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGATT
TTCAGTGACATCAGAAAATTTAGATCTGGTGAAG
						
					

			
		

Sequences
Splice junction sequence	GCTAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGA TTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGggcacaactgattcccagtttattgtgg acaaaaagaattcaaataacttgcaacaagatgagttcacatcacaagtaggtagtaatgacat accaaaga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 507 Transcript exons: 40690146-40690420,40694130-40694266,40694373-40694467 GGCACAACTGATTCCCAGTTTATTGTGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGT TCACATCACAAGTAGGTAGTAATGACATACCAAAGAGTGAGAAAAGAAATGGATCAGTTGCTGA AGCAACACCATCTACTTTAGAGAATGATGTGGGAACAAGCAAAGTTAAAACTCAATCAGTGAAA CTTGGTAAAACCCAAAGTGGACCCCTGATGCCAGGCTTAGTGCTTGGCCATTCTTCATCTGAAA GAGGGCGTACATTTGAAAGGTTTGAGAATGAAAATCAGTTATTGGGTGAGAAAAGTAATCGTGA TATACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGT TTATCAGCCCCAATCAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTA ATCTAGTGCAAATTAAAGGACGATTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAG
Genomic sequence	GGCACAACTGATTCCCAGTTTATTGTGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGT TCACATCACAAGTAGGTAGTAATGACATACCAAAGAGTGAGAAAAGAAATGGATCAGTTGCTGA AGCAACACCATCTACTTTAGAGAATGATGTGGGAACAAGCAAAGTTAAAACTCAATCAGTGAAA CTTGGTAAAACCCAAAGTGGACCCCTGATGCCAGGCTTAGTGCTTGGCCATTCTTCATCTGAAA GAGGGCGTACATTTGAAAGGTACATTGTATTTGCATATTATATCTTTGTTGTTGTTTTTATATT AGGCTGTTGTTGGAAGTTCCAGAGAGAATGAAATGAAAAAGGAAAGGGAGAGAAGGGAAGGAAT GGAAAGCAATTGCCTTCCCTATGTTTGATGACTAAAGATGAAAGGAAGTGTAAGTTGAATAAGG TGGTCCAGTGCATGAGGTTCCCACCTAGTGGGGTCCGGGGAGGGTATATGTAATTATGTATGCA GCCTTACCTTCACAAGCTGATATACTGTTTCTAGGATTTGAACCTGTGATCTTCAGGTCTCAAA GCAGCAACCTTACCACTACCTAAGCTTATCCTCGAAAGAGTGAGCTAAAGAGTTATAATTATAA GTGCAAAATTTCAACATAACCCTACCAAACTTTTTGGAACTTCTCAATTTATTGCGTAAAATAG TAAATGAGGTAGTTTTCAAAATAAAATTAAAGCTATTCTCCTTCATTACCCTGTTTCCCCTCAA AATTTGGAGAGAATAAAAGATGACTTTTTGTAACTTCTCAATTTATTGCATAAAATAGTAAATG AGGTAGTTTTCAAAATAAAATTAAAGCTATTCTGCTTCATTACCCTGTTTCCCATCAAAATTTG GAGAGAGTAAAAGATGAGTTTTCAGAGGGGGAATAATTCCCCCTCATATGATGCCCTTGCGGCC TTGCCTTCATATTGTTTTAATACTCAAGGAGCTATTTCCTTTCCATGGTAATCATTGTTCCTTG TACAATTAGGCTCTTAGTTGAGGAAAGATAAAAACAAGTAGGCTTTGATGTGTTTGTTAGTGTT GAAAATATGTTGTTTTATATAAAATATGGGACCCACGACCTGGTACTTAATTATTTTGTGATTT TGAGATATTTTTTTTGGTTTGCCATGACTTTTCAGACTTGGAACTTTTTTGTGCTTGCTAAATT TGTTGAAAGTGTTGGTCCAAGAAGTCAAGGTAATCAGTTTCTGAGTTTGAAGGACAAAAGTAAC ACTTGGAAGTTACCAGTTTTCTCAGTAAACTAATACCATCAAATAAACTGTATATATAGGTTAA AAAATAAATACCCTAAGAAAAGAAGTTTGCTACATTATATATCTAAAGAGATGGAGCATTTACT AACAAGACTAGCTCAAAGTATTATCAGTGGAGGATGAGTTGGTTATATTGGTTTATATCTTTGA AAGCATTTCATTTTTAAATTCTTTTTTGGTTTGAGCCTGTGTGGAAAAGACCTGTAGAAGCCCT AGTAAGGAAAATAGTTTAGATGGAGGGTAACCCTATTGTTAGAGGTAGAAGAGTCCGAGAAAAA CAATAGGCAAACTCGTTATTAAGATGGATTTAGAGGTCAATGGTTTGTCTATTAATACGAATCA CAATAGAATATTATGTTGTCGTTTGATTCATGTAGCCGATCCTAATATGAAAAGGCTTGGTTGT TGTCGTCGTTAAAGATTGTAGAACTAAATGATGCTAAAATATTTTATATGGAGAGTTTTGTAAA GGTGATTCACCTTTATATTAGTATGGAATAAAGATAATAAGTAAGGCAATATATGGGTTGAGCT GTTCATAAACTTTTTAAGCTTGACTTGTTAAATGTTCAAATAAACTTGTTTGTTCAACTAAACA AAGAAGCTCAAGTTTTTTTCAATTCAGATTTGTTATATATAGGATTGACTTTAAAACTCATAAA TAGCTTGTGTGTTTTTTGTATCAATGGCAAAAAAAAATAATTTAATTTTAGATAAGACAATGCA TAAACAATATATATTACTACTTAGTAAATTATTAATCCATCTTGAGAATTGTAATTTTATTTAT TGCTACTACATTGTTCAAAACGTTTTGCACTTTCTTCATATTTTTTTCTTCATCTTCTAGAGCG ATTCTTGTGTCAGCATAGTGCCTATTAGGCACAACCAATTGAAAGCTCCGGATGTGTTAGAATA ATAATAAAGTTTGTGTTGAAACTATTTAACTATTCTAAGCTTTTGATTGGTTATGCCTATAGGC ATTGCACTCATGCAAGAACTGCTCCATCTTCCAGCATAATATGCCTACTGAAAATGATGTCAAA AAACATAAAAAGTTGCTTCATAGAGATATTTGGTACAGAGGGGAAAAAAATCTATAAATGAGCT AATGATGGCGAACTCAGTTTATATTTTAAGGTTGAATTACTATTTTGGTCCTCTAATTTATTTT TTAGGTTCAATTTAGTCCTCTTATTATTTGAAGGGTCAATTAAGTCCTGCAATTTTTAAAAAAG GTTCAGTTAGGCTCCTTTATTTTTGAAAGTTTCGATTAGGTCCCTTGTTTTAAAAATGAGTTCA ATTTGGTCCCATTGAAAACCAAATTTGATCCTATCTTCTAAAATTTCCAGAGCAGATGGAAGAA AAATGAGACCAAATTGAATCCATTTTAAAAAATAAAGGACCTAATTGAACATTTTAAAAGTAAA GAGACCTAATTGAACCATTTTAAAAAATTACAGGGTCTATTGAACCTTTTAATAATAAGTGGAC CAAATTGAATCTAAAAAACAAATTAGAGAACCAAAATAGTAATTTAAACTTTTTTAAAACAAGG CAAACCCAAGTTTTTAAATTTAATTTGTTTAAATAAATGAATCTCAAGTCAAGTTGGAGGTTCA AGTGCTCGGCCTGGCTCTACTTAAAACTTTCCTAACAAGATAAGGAAACTACACACATGTCAAT TAATCTCAGGTGTCAAATTTTGTAAAACCACACCTCCAATAACTTTTTACCAAAAATAAACTTA TTCAATCTAACTGTTAAATTAAAAGTTCATATGAGATGGATATAGTCTAAAACATTTCATACAA TTTCTAATTCAATTGATACTTCATTGCATGATTTTTATTATAACATAAAACATCCTATTCAAAA TATAGGTAAATAGTTACTTTTAGATTACATCTCTATGAATGTTTAAATCATGTGAAACACTACT ATTCTAAGAAGATAATTTTATGATTCTTAATTTCATATTACAAAAGTATTATGTTAATTTTAAT ATGCACAGATGACGGATGAGGTATTAAATAATTTTGGATTAATCTAAAAGTTTGCAAATATAAT ATATATAATAGGAACTTTTAATCTAATGATAGATTTTAGGATAATATTGTCCAATAAAAAGTTA GAGGTGTAAGAGTGAGTGTAACTCACATAAGTGTAAGTTGATCCCTCCTTTCTCTCTTTCACAT ACAAGCGCACATGTGTGCCCACACACATGCGCTAGGTTTGGGTACATTCTCCATTTGGAATTGC AGCTGATAGTGTGGAATTGAAAAATAATTATTGTATTGTTTATCAATGGTTAATGGTACCATTC TTCTGTCATAGCTTGTAATTTAGGAAGTACTTTTGGTGACCTATAAACATGGCAATCAATCACG ATTATTTTATTTTCATTGAGTTCTAGTAAGTTCAAAGTCTACCTTCGTAAAGTGTGTATTTTCT GGAGAATCTTCTTTATGCCTTCTATATTTCTTGATTTGTCTATAAATATTTTATGTATAAGTGT AATTTGAATTTTGAATAAATAAATTCAATGTTGTGTGTGTCTTTCTGGTTTTGTCCTTTATGCT GCCTGGTGATTGAGGTTTTCTTGTTATCACCAGCATAACCATTTGCTTGTTAAAATTTGTAATG CTTTATTACTTTTTAGGTTTGAGAATGAAAATCAGTTATTGGGTGAGAAAAGTAATCGTGATAT ACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTA TCAGCCCCAATCAAATCTTCTGGAGGTATTTGAATCATCATGTACACCGTAAGGCTGTGTGCTA GTTTTAGTATTTTTCAACCAGCCTCTTAAACACTTGGTTTTGATTTTGTTCACCCAACTCTTGC TAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGATT TTCAGTGACATCAGAAAATTTAGATCTGGTGAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.166372594

Conservation Information
Conserved circRNAs	NA
PMCS	0.166372594

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							40690366-40694464(+)
40690239-40694147(-)
						
						Potential amino acid sequence
						
							MPGLVLGHSSSERGRTFERFENENQLLGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSG
GFRDSLDDKSKANLVQIKGRFSVTSENLDLVKGTTDSQFIVDKKNSNNLQQDEFTSQVGSNDIP
KSEKRNGSVAEATPSTLENDVGTSKVKTQSVKLGKTQSGPLMPGLVLGHSSSERGRTFERFENE
NQLLGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSV
TSENLDLVKGTTDSQFIVDKKNSNNLQQDEFTSQVGSNDIPKSEKRNGSVAEATPSTLENDVGT
SKVKTQSVKLGKTQSGPLMPGLVLGHSSSERGRTFERFENENQLLGEKSNRDIRRAPSFSGPLM
LPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKGTTDSQFIVDKKNS
NNLQQDEFTSQVGSNDIPKSEKRNGSVAEATPSTLENDVGTSKVKTQSVKLGKTQSGPLMPGLV
LGHSSSERGRTFERFENENQLLGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDS
LDDKSKANLVQIKGRFSVTSENLDLVK(+)
MSLLPTCDVNSSCCKLFEFFLSTINWESVVPFTRSKFSDVTENRPLICTRLALDLSSKESLNPP
EDLIGADKLFAEARFGSINGPLKLGARRISRLLFSPNN*(-)
						
						Sponge-miRNAs
						
							gma-miR5773 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	40690366-40694464(+) 40690239-40694147(-)
Potential amino acid sequence	MPGLVLGHSSSERGRTFERFENENQLLGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSG GFRDSLDDKSKANLVQIKGRFSVTSENLDLVKGTTDSQFIVDKKNSNNLQQDEFTSQVGSNDIP KSEKRNGSVAEATPSTLENDVGTSKVKTQSVKLGKTQSGPLMPGLVLGHSSSERGRTFERFENE NQLLGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSV TSENLDLVKGTTDSQFIVDKKNSNNLQQDEFTSQVGSNDIPKSEKRNGSVAEATPSTLENDVGT SKVKTQSVKLGKTQSGPLMPGLVLGHSSSERGRTFERFENENQLLGEKSNRDIRRAPSFSGPLM LPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKGTTDSQFIVDKKNS NNLQQDEFTSQVGSNDIPKSEKRNGSVAEATPSTLENDVGTSKVKTQSVKLGKTQSGPLMPGLV LGHSSSERGRTFERFENENQLLGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDS LDDKSKANLVQIKGRFSVTSENLDLVK(+) MSLLPTCDVNSSCCKLFEFFLSTINWESVVPFTRSKFSDVTENRPLICTRLALDLSSKESLNPP EDLIGADKLFAEARFGSINGPLKLGARRISRLLFSPNN*(-)
Sponge-miRNAs	gma-miR5773
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017a

circRNA

Detail information of GLYMA_10G173000_circ_g.2

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