Plant Circular RNA Database

Detail information of Os07g0507700_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os07g0507700_circ_g.2
					
						ID in PlantcircBase
						osa_circ_033987
					
						Alias
						Os07circ08968/Os_ciR370
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 19285231-19286540  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, find_circ
					
						Parent gene
						
							Os07g0507700						
					
						Parent gene annotation
						
							Bromodomain domain containing protein. (Os07t0507700-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os07g0507700_circ_g.1 Os07g0507700_circ_g.3 Os07g0507700_circ_g.4 Os07g0507700_circ_g.5 Os07g0507700_circ_g.6 Os07g0507700_circ_g.7 						
					
						Support reads
						23/112/31
					
						Tissues
						leaf and panicle/root/shoot, root, seed, pistil
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0507700-01:5

General Information
CircRNA Name	Os07g0507700_circ_g.2
ID in PlantcircBase	osa_circ_033987
Alias	Os07circ08968/Os_ciR370
Organism	Oryza sativa
Position	chr7: 19285231-19286540 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, CIRI, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, find_circ
Parent gene	Os07g0507700
Parent gene annotation	Bromodomain domain containing protein. (Os07t0507700-01)
Parent gene strand	+
Alternative splicing	Os07g0507700_circ_g.1 Os07g0507700_circ_g.3 Os07g0507700_circ_g.4 Os07g0507700_circ_g.5 Os07g0507700_circ_g.6 Os07g0507700_circ_g.7
Support reads	23/112/31
Tissues	leaf and panicle/root/shoot, root, seed, pistil
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0507700-01:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: CCTTGCGATGATGCTTCTACTT
 R: AATCCATCCACTTTTGTGATCC
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: CCTTGCGATGATGCTTCTACTT R: AATCCATCCACTTTTGTGATCC PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TACTGTTTTATTTTACTAAAGCACTCAATTATTATCTTAGGAAATGAATTGCGGCCTTGCGATG
ATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAGcttgcctctatctgaatcttctggccct
gaaaagaagctaaaattatttttctttgtcaagaccaaaaagtatttattcaaaccaaacacta
tgaccaca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 132
Transcript exons: 19285231-19285313,19286492-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGA
CAAG
Transcript length: 139
Transcript exons: 19285231-19285327,19286499-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCGCGATGATGCTTCTACTTCACCTCTTGCTTC
TTCCAGACAAG
Transcript length: 145
Transcript exons: 19285231-19285330,19286496-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACTTGCGATGATGCTTCTACTTCACCTCT
TGCTTCTTCCAGACAAG
Transcript length: 149
Transcript exons: 19285231-19285318,19286480-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCAC
CTCTTGCTTCTTCCAGACAAG
Transcript length: 157
Transcript exons: 19285231-19285346,19286500-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGACGATGATGCTTC
TACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 160
Transcript exons: 19285231-19285346,19286497-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGATTGCGATGATGC
TTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 167
Transcript exons: 19285231-19285352,19286496-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCTTGCG
ATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 178
Transcript exons: 19285231-19285366,19286499-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 180
Transcript exons: 19285231-19285354,19286485-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCATGAA
TTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 196
Transcript exons: 19285231-19285375,19286490-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCATGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGA
CAAG
Transcript length: 217
Transcript exons: 19285231-19285406,19286500-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGCGATGATGCTTCTACT
TCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 220
Transcript exons: 19285231-19285399,19286490-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGTGCGGCCTTGCGATGATGCTTCT
ACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 237
Transcript exons: 19285231-19285415,19286489-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTTGCGGC
CTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 241
Transcript exons: 19285231-19285410,19286480-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGGGAAATGAATTG
CGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 242
Transcript exons: 19285231-19285413,19286482-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAAAATGAATT
GCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 246
Transcript exons: 19285231-19285427,19286492-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA
AAAAGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 255
Transcript exons: 19285231-19285441,19286497-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA
AAAAGATGGGGTCACGTCATTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG
Transcript length: 257
Transcript exons: 19285231-19285427,19286481-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA
AAAAGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAA
G
Transcript length: 261
Transcript exons: 19285231-19285430,19286480-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA
AAAAGATGGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAG
ACAAG
Transcript length: 968
Transcript exons: 19285231-19285969,19286047-19286095,19286179-19286243,19
286353-19286407,19286481-19286540
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA
AAAAGATGGGGTCACGTCAGTCTATACATGTGGTCACCAGCCAACCTCTAAGAATAAGGTTGAT
CCGATGAATACTAGCAAGTCAAGGCAGTGTGGAAGTATTCTGAAGAAGCTCATGGATCACAAAA
GTGGATGGATTTTTAATACACCAGTTGATCCAGTGGTATATGGAATTCCTGATTACTTTGATGT
TATTCGCAATCCGATGGACTTGGGTACTGTTAAAAGGAAACTCACAAGCAAGCAATATTCCAAC
CCTTATGAGTTTGCAGCAGATGTGAGGCTAACATTCTCGAATGCGATGAAGTATAATCCTCCAG
GAAATGATGTCCACGGAATAGCTGATCAATTGAACAAAATATTTGATTCGGAATGGAAATTATT
GGAAAGGAAATGGAAAGACAGAAATTTGGTACAAGAGCAGCCATCACTGAAGGTATTAAAGGCT
CAGCCTGCTGTTACCCCAAAACCTGTGCTACCTAAGGGGGTGACTGCAGGCACAAATTCAGCTG
TGAGCAAGACACTGGCAACTGCATTATCCTCCAAAGTAAAAATTAAATTTTCTGTGCGAGGCTC
TGAGCTGACCTCTTCCAAAGACACGCCTTTGCAAGCAGTTGGCAGAAGAGACGGCACAATTAAC
CAATCTCTCCCTTGCACCAAGGACAATGCTAAGACACCAAGGATACAATCAAGTGAGGACAGAT
CTGAATCAACTGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTC
CAGACAAG
						
					

						Genomic sequence
						
							CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC
AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT
ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA
AAAAGATGGGGTCACGTCAGTCTATACATGTGGTCACCAGCCAACCTCTAAGAATAAGGTTGAT
CCGATGAATACTAGCAAGTCAAGGCAGTGTGGAAGTATTCTGAAGAAGCTCATGGATCACAAAA
GTGGATGGATTTTTAATACACCAGTTGATCCAGTGGTATATGGAATTCCTGATTACTTTGATGT
TATTCGCAATCCGATGGACTTGGGTACTGTTAAAAGGAAACTCACAAGCAAGCAATATTCCAAC
CCTTATGAGTTTGCAGCAGATGTGAGGCTAACATTCTCGAATGCGATGAAGTATAATCCTCCAG
GAAATGATGTCCACGGAATAGCTGATCAATTGAACAAAATATTTGATTCGGAATGGAAATTATT
GGAAAGGAAATGGAAAGACAGAAATTTGGTACAAGAGCAGCCATCACTGAAGGTATTAAAGGCT
CAGCCTGCTGTTACCCCAAAACCTGTGCTACCTAAGGGGGTGACTGCAGGCACAAATTCAGCTG
TGAGCAAGACACTGGCAACTGCATTATCCTCCAAAGTATGATCACAGTCATGTACCCTCATTCA
GTGATTTTTCTTCTTGGGACTTTGATCAAAGTACTGCTCTCTTTGCAGGTAAAAATTAAATTTT
CTGTGCGAGGCTCTGAGCTGACCTCTTCCAAAGGTGTGAATAGAATAAACTCTATGCATACAAT
CTTTCCATTGTTGATTGTATTTGACAGCCATTACCAATGCTTTTCAATTCAGACACGCCTTTGC
AAGCAGTTGGCAGAAGAGACGGCACAATTAACCAATCTCTCCCTTGCACCAAGGTTTTGGGCAC
GAGCTCCTTTGTTTATACTTGAGTATTCTTATCTGAGTCTTGGTATCATTAGCTAAACAATTGT
GTGATCCCCCTCTTGTCTTGTCTTTTATTTTTAGGACAATGCTAAGACACCAAGGATACAATCA
AGTGAGGACAGATCTGAATCAACTGGTATGTTTATGATTTCCACGTAATTTTATCCCATACTGT
TTTATTTTACTAAAGCACTCAATTATTATCTTAGGAAATGAATTGCGGCCTTGCGATGATGCTT
CTACTTCACCTCTTGCTTCTTCCAGACAAG
						
					

			
		

Sequences
Splice junction sequence	TACTGTTTTATTTTACTAAAGCACTCAATTATTATCTTAGGAAATGAATTGCGGCCTTGCGATG ATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAGcttgcctctatctgaatcttctggccct gaaaagaagctaaaattatttttctttgtcaagaccaaaaagtatttattcaaaccaaacacta tgaccaca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 132 Transcript exons: 19285231-19285313,19286492-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGA CAAG Transcript length: 139 Transcript exons: 19285231-19285327,19286499-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCGCGATGATGCTTCTACTTCACCTCTTGCTTC TTCCAGACAAG Transcript length: 145 Transcript exons: 19285231-19285330,19286496-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACTTGCGATGATGCTTCTACTTCACCTCT TGCTTCTTCCAGACAAG Transcript length: 149 Transcript exons: 19285231-19285318,19286480-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCAC CTCTTGCTTCTTCCAGACAAG Transcript length: 157 Transcript exons: 19285231-19285346,19286500-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGACGATGATGCTTC TACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 160 Transcript exons: 19285231-19285346,19286497-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGATTGCGATGATGC TTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 167 Transcript exons: 19285231-19285352,19286496-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCTTGCG ATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 178 Transcript exons: 19285231-19285366,19286499-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 180 Transcript exons: 19285231-19285354,19286485-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCATGAA TTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 196 Transcript exons: 19285231-19285375,19286490-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCATGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGA CAAG Transcript length: 217 Transcript exons: 19285231-19285406,19286500-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGCGATGATGCTTCTACT TCACCTCTTGCTTCTTCCAGACAAG Transcript length: 220 Transcript exons: 19285231-19285399,19286490-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGTGCGGCCTTGCGATGATGCTTCT ACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 237 Transcript exons: 19285231-19285415,19286489-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTTGCGGC CTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 241 Transcript exons: 19285231-19285410,19286480-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGGGAAATGAATTG CGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 242 Transcript exons: 19285231-19285413,19286482-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAAAATGAATT GCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 246 Transcript exons: 19285231-19285427,19286492-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 255 Transcript exons: 19285231-19285441,19286497-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGATGGGGTCACGTCATTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAG Transcript length: 257 Transcript exons: 19285231-19285427,19286481-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAA G Transcript length: 261 Transcript exons: 19285231-19285430,19286480-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGATGGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAG ACAAG Transcript length: 968 Transcript exons: 19285231-19285969,19286047-19286095,19286179-19286243,19 286353-19286407,19286481-19286540 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGATGGGGTCACGTCAGTCTATACATGTGGTCACCAGCCAACCTCTAAGAATAAGGTTGAT CCGATGAATACTAGCAAGTCAAGGCAGTGTGGAAGTATTCTGAAGAAGCTCATGGATCACAAAA GTGGATGGATTTTTAATACACCAGTTGATCCAGTGGTATATGGAATTCCTGATTACTTTGATGT TATTCGCAATCCGATGGACTTGGGTACTGTTAAAAGGAAACTCACAAGCAAGCAATATTCCAAC CCTTATGAGTTTGCAGCAGATGTGAGGCTAACATTCTCGAATGCGATGAAGTATAATCCTCCAG GAAATGATGTCCACGGAATAGCTGATCAATTGAACAAAATATTTGATTCGGAATGGAAATTATT GGAAAGGAAATGGAAAGACAGAAATTTGGTACAAGAGCAGCCATCACTGAAGGTATTAAAGGCT CAGCCTGCTGTTACCCCAAAACCTGTGCTACCTAAGGGGGTGACTGCAGGCACAAATTCAGCTG TGAGCAAGACACTGGCAACTGCATTATCCTCCAAAGTAAAAATTAAATTTTCTGTGCGAGGCTC TGAGCTGACCTCTTCCAAAGACACGCCTTTGCAAGCAGTTGGCAGAAGAGACGGCACAATTAAC CAATCTCTCCCTTGCACCAAGGACAATGCTAAGACACCAAGGATACAATCAAGTGAGGACAGAT CTGAATCAACTGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTC CAGACAAG
Genomic sequence	CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGATGGGGTCACGTCAGTCTATACATGTGGTCACCAGCCAACCTCTAAGAATAAGGTTGAT CCGATGAATACTAGCAAGTCAAGGCAGTGTGGAAGTATTCTGAAGAAGCTCATGGATCACAAAA GTGGATGGATTTTTAATACACCAGTTGATCCAGTGGTATATGGAATTCCTGATTACTTTGATGT TATTCGCAATCCGATGGACTTGGGTACTGTTAAAAGGAAACTCACAAGCAAGCAATATTCCAAC CCTTATGAGTTTGCAGCAGATGTGAGGCTAACATTCTCGAATGCGATGAAGTATAATCCTCCAG GAAATGATGTCCACGGAATAGCTGATCAATTGAACAAAATATTTGATTCGGAATGGAAATTATT GGAAAGGAAATGGAAAGACAGAAATTTGGTACAAGAGCAGCCATCACTGAAGGTATTAAAGGCT CAGCCTGCTGTTACCCCAAAACCTGTGCTACCTAAGGGGGTGACTGCAGGCACAAATTCAGCTG TGAGCAAGACACTGGCAACTGCATTATCCTCCAAAGTATGATCACAGTCATGTACCCTCATTCA GTGATTTTTCTTCTTGGGACTTTGATCAAAGTACTGCTCTCTTTGCAGGTAAAAATTAAATTTT CTGTGCGAGGCTCTGAGCTGACCTCTTCCAAAGGTGTGAATAGAATAAACTCTATGCATACAAT CTTTCCATTGTTGATTGTATTTGACAGCCATTACCAATGCTTTTCAATTCAGACACGCCTTTGC AAGCAGTTGGCAGAAGAGACGGCACAATTAACCAATCTCTCCCTTGCACCAAGGTTTTGGGCAC GAGCTCCTTTGTTTATACTTGAGTATTCTTATCTGAGTCTTGGTATCATTAGCTAAACAATTGT GTGATCCCCCTCTTGTCTTGTCTTTTATTTTTAGGACAATGCTAAGACACCAAGGATACAATCA AGTGAGGACAGATCTGAATCAACTGGTATGTTTATGATTTCCACGTAATTTTATCCCATACTGT TTTATTTTACTAAAGCACTCAATTATTATCTTAGGAAATGAATTGCGGCCTTGCGATGATGCTT CTACTTCACCTCTTGCTTCTTCCAGACAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_007203* osi_circ_017117 						
					
						PMCS
						0.459621412

Conservation Information
Conserved circRNAs	osi_circ_007203* osi_circ_017117
PMCS	0.459621412

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							19285323-19285268(+)
19286358-19285242(+)
						
						Potential amino acid sequence
						
							MTTQACKKRRAVYISSESEDSGTDSEVEGSKLSKKDGVTSVYTCGHQPTSKNKVDPMNTSKSRQ
CGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYEFAADVR
LTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKWKDRNLVQEQPSLKVLKAQPAVTPKPV
LPKGVTAGTNSAVSKTLATALSSKVKIKFSVRGSELTSSKDTPLQAVGRRDGTINQSLPCTKDN
AKTPRIQSSEDRSESTGNELRPCDDASTSPLASSRQACLYLNLLALKRS*(+)
MLRHQGYNQVRTDLNQLEMNCGLAMMLLLHLLLLPDKLASI*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to Pi-starvation

Functional Information
Coding potential	Y
Potential coding position	19285323-19285268(+) 19286358-19285242(+)
Potential amino acid sequence	MTTQACKKRRAVYISSESEDSGTDSEVEGSKLSKKDGVTSVYTCGHQPTSKNKVDPMNTSKSRQ CGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYEFAADVR LTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKWKDRNLVQEQPSLKVLKAQPAVTPKPV LPKGVTAGTNSAVSKTLATALSSKVKIKFSVRGSELTSSKDTPLQAVGRRDGTINQSLPCTKDN AKTPRIQSSEDRSESTGNELRPCDDASTSPLASSRQACLYLNLLALKRS(+) MLRHQGYNQVRTDLNQLEMNCGLAMMLLLHLLLLPDKLASI(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to Pi-starvation

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os07g0507700_circ_g.2

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