Splice junction sequence |
AGCTCTTGCTGATGTGCTTTTTTAATCTCCTAGGGGAAGAAAATAGACCCTGCGAAATTGCAGT TAGAAAAGGAGAGGCTGGAAAAAAGGCAGCAAGAAGcttgcctctatctgaatcttctggccct gaaaagaagctaaaattatttttctttgtcaagaccaaaaagtatttattcaaaccaaacacta tgaccaca
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 1154 Transcript exons: 19285231-19285969,19286047-19286095,19286179-19286243,19 286353-19286407,19286481-19286540,19287686-19287804,1928 7925-19287991 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGATGGGGTCACGTCAGTCTATACATGTGGTCACCAGCCAACCTCTAAGAATAAGGTTGAT CCGATGAATACTAGCAAGTCAAGGCAGTGTGGAAGTATTCTGAAGAAGCTCATGGATCACAAAA GTGGATGGATTTTTAATACACCAGTTGATCCAGTGGTATATGGAATTCCTGATTACTTTGATGT TATTCGCAATCCGATGGACTTGGGTACTGTTAAAAGGAAACTCACAAGCAAGCAATATTCCAAC CCTTATGAGTTTGCAGCAGATGTGAGGCTAACATTCTCGAATGCGATGAAGTATAATCCTCCAG GAAATGATGTCCACGGAATAGCTGATCAATTGAACAAAATATTTGATTCGGAATGGAAATTATT GGAAAGGAAATGGAAAGACAGAAATTTGGTACAAGAGCAGCCATCACTGAAGGTATTAAAGGCT CAGCCTGCTGTTACCCCAAAACCTGTGCTACCTAAGGGGGTGACTGCAGGCACAAATTCAGCTG TGAGCAAGACACTGGCAACTGCATTATCCTCCAAAGTAAAAATTAAATTTTCTGTGCGAGGCTC TGAGCTGACCTCTTCCAAAGACACGCCTTTGCAAGCAGTTGGCAGAAGAGACGGCACAATTAAC CAATCTCTCCCTTGCACCAAGGACAATGCTAAGACACCAAGGATACAATCAAGTGAGGACAGAT CTGAATCAACTGGAAATGAATTGCGGCCTTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTC CAGACAAGAAGAGGAATATTTGCCTGAAGAACCTTTATCACCAAGCAAGGCTCTTCGTGCAGCA ATGCTCAAGAGTCGTTTTGCTGGTACAATTGTCAAGGCGCAGCAGAAAGCACTTCTGGATCATG GGAAGAAAATAGACCCTGCGAAATTGCAGTTAGAAAAGGAGAGGCTGGAAAAAAGGCAGCAAGA AG
Transcript length: 304 Transcript exons: 19285231-19285441,19286497-19286540,19287943-19287991 CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGATGGGGTCACGTCATTGCGATGATGCTTCTACTTCACCTCTTGCTTCTTCCAGACAAGG CGAAATTGCAGTTAGAAAAGGAGAGGCTGGAAAAAAGGCAGCAAGAAG
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Genomic sequence |
CTTGCCTCTATCTGAATCTTCTGGCCCTGAAAAGAAGCTAAAATTATTTTTCTTTGTCAAGACC AAAAAGTATTTATTCAAACCAAACACTATGACCACACAAGCTTGTAAGAAGAGAAGAGCAGTTT ATATAAGCAGTGAATCAGAAGACTCTGGTACAGACTCTGAGGTTGAGGGAAGCAAACTCTCCAA AAAAGATGGGGTCACGTCAGTCTATACATGTGGTCACCAGCCAACCTCTAAGAATAAGGTTGAT CCGATGAATACTAGCAAGTCAAGGCAGTGTGGAAGTATTCTGAAGAAGCTCATGGATCACAAAA GTGGATGGATTTTTAATACACCAGTTGATCCAGTGGTATATGGAATTCCTGATTACTTTGATGT TATTCGCAATCCGATGGACTTGGGTACTGTTAAAAGGAAACTCACAAGCAAGCAATATTCCAAC CCTTATGAGTTTGCAGCAGATGTGAGGCTAACATTCTCGAATGCGATGAAGTATAATCCTCCAG GAAATGATGTCCACGGAATAGCTGATCAATTGAACAAAATATTTGATTCGGAATGGAAATTATT GGAAAGGAAATGGAAAGACAGAAATTTGGTACAAGAGCAGCCATCACTGAAGGTATTAAAGGCT CAGCCTGCTGTTACCCCAAAACCTGTGCTACCTAAGGGGGTGACTGCAGGCACAAATTCAGCTG TGAGCAAGACACTGGCAACTGCATTATCCTCCAAAGTATGATCACAGTCATGTACCCTCATTCA GTGATTTTTCTTCTTGGGACTTTGATCAAAGTACTGCTCTCTTTGCAGGTAAAAATTAAATTTT CTGTGCGAGGCTCTGAGCTGACCTCTTCCAAAGGTGTGAATAGAATAAACTCTATGCATACAAT CTTTCCATTGTTGATTGTATTTGACAGCCATTACCAATGCTTTTCAATTCAGACACGCCTTTGC AAGCAGTTGGCAGAAGAGACGGCACAATTAACCAATCTCTCCCTTGCACCAAGGTTTTGGGCAC GAGCTCCTTTGTTTATACTTGAGTATTCTTATCTGAGTCTTGGTATCATTAGCTAAACAATTGT GTGATCCCCCTCTTGTCTTGTCTTTTATTTTTAGGACAATGCTAAGACACCAAGGATACAATCA AGTGAGGACAGATCTGAATCAACTGGTATGTTTATGATTTCCACGTAATTTTATCCCATACTGT TTTATTTTACTAAAGCACTCAATTATTATCTTAGGAAATGAATTGCGGCCTTGCGATGATGCTT CTACTTCACCTCTTGCTTCTTCCAGACAAGGTTGGACATGCTATCTATTTATCCATCTATTTGT GCATGTTAATTTGCATACTAGTATCTCTGTTCTCAAAAGGATGATGTCCTAGATTCATTGCAAA CACAGTCAAACCTCAAAAATCTTAAATCATTAATAAATGAAAAAATACCAGGATTTAAAAATCA TATTAGTAGATTTGTGAGGAAAAACTGTCATATGGTTATATTTTAAATATTGTTCCCATACTAT CATAAAAATACAAACTGATTCCATTTGTCATCCTTGAGTTTTCGGCCATGGCGCAATTCTGTCG ATTTCCTGCACGTGATTTTTCGGTCGTCTCATCATTGTTTGTTTTTCATCTGAGTCCTGTGCAC ACTGTGGTCCGTTGTCTGCATCCGAGACCCACTCACATCCGTTGTCCAACGTCCCACGCATGAC CCTGCCTCACCTTGGCCACATGCACCCCTCTTCCGTGTGCCCATGGTGCTCCCCTCCTGATCCA TCCTTTCCTTTCGTCCATCTCCCTCTTCCTATGCTGCGAGAAGCAGAGCTGCCACAAGCAGAGG CAAAGCACAGAGCGTGATTCACTTAGCTAAGCTGAACATGATCCCTTAATTTTTCTCCATCAGA TAAGCATCGAGAAGAAGTGGAACAAATTTCTGGATTGATTCATTGTTTATGTGAGTAGTTCTCA AGTCTGGTTTAGTTACATTACGTAAATGTTTCTGATCCACACCCTTCTTTTCGTAGGACGATGA AAAAGAATGGATAAAGATCCCAAGAATACATAGTTTGATCTGAATACTCATACCTTGAGAATAG CACATCTACAAGTAGGATTTCCTCTGTGATCGTACCAAAACATGAGTTCCATTTGGATTTTCTT TTTTATCATTGGATTTCTTCAATGCTATAGTGTCATTCTTCTGGCGCTTAATGCTATCTATTCC CAATTACAATTGTGTACAGCCCTACACCCGTTGCAATGCACGGTCATTTTGCTAGTAAATATAT AACTTGAGAAAGTAATGATAAAACATGTGCATTGGAGACTGCCGATGTCCTAAATGACAACCAT TTGAGAACAGAGGGTAGTAACTTTATCATCTATTCTTTCCATATGTTCCTTTGCTAATATATTG CATCTTATGATGTGAATTTTCAGAAGAGGAATATTTGCCTGAAGAACCTTTATCACCAAGCAAG GCTCTTCGTGCAGCAATGCTCAAGAGTCGTTTTGCTGGTACAATTGTCAAGGCGCAGCAGAAAG CACTTCTGGATCATGTATTATTTCTGAAATGTGTACTGAAATTTGTAGATTTCAATTAGGCTAT TCCTTCGCATAGGACAAGTTCTAGTCTACGTCTGTGTAGCTCTTGCTGATGTGCTTTTTTAATC TCCTAGGGGAAGAAAATAGACCCTGCGAAATTGCAGTTAGAAAAGGAGAGGCTGGAAAAAAGGC AGCAAGAAG |