Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d049155_circ_g.1 |
ID in PlantcircBase | zma_circ_001629 |
Alias | circ732 |
Organism | Zea mays |
Position | chr4: 18230121-18231958 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d049155 |
Parent gene annotation |
Sec23/Sec24 protein transport family protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 5 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d049155_T020:4 Zm00001d049155_T014:4 Zm00001d049155_T008:4 Zm00001d049155_T033:5 Zm00001d049155_T025:4 Zm00001d049155_T037:4 Zm00001d049155_T013:4 Zm00001d049155_T002:4 Zm00001d049155_T027:5 Zm00001d049155_T016:4 Zm00001d049155_T006:5 Zm00001d049155_T039:3 Zm00001d049155_T029:4 Zm00001d049155_T005:4 Zm00001d049155_T038:3 Zm00001d049155_T036:4 Zm00001d049155_T009:4 Zm00001d049155_T030:4 Zm00001d049155_T024:3 Zm00001d049155_T018:3 Zm00001d049155_T026:4 Zm00001d049155_T003:5 Zm00001d049155_T023:4 Zm00001d049155_T034:4 Zm00001d049155_T007:5 Zm00001d049155_T032:4 Zm00001d049155_T028:4 Zm00001d049155_T017:4 Zm00001d049155_T004:4 Zm00001d049155_T021:4 |
Conservation Information | |
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Conserved circRNAs | osa_circ_009250 |
PMCS | 0.014327004 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |