Plant Circular RNA Database

Detail information of Zm00001d004396_circ_g.6

			
						 General Information
					
						CircRNA Name
						Zm00001d004396_circ_g.6
					
						ID in PlantcircBase
						zma_circ_007244
					
						Alias
						Zm02circ00072, zma_circ_0000792, GRMZM2G137984_C2
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 108746786-108751424  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d004396						
					
						Parent gene annotation
						
							Vacuolar protein sorting-associated protein 54 chloroplastic
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d004396_circ_g.1 Zm00001d004396_circ_g.2 Zm00001d004396_circ_g.3 Zm00001d004396_circ_g.4 Zm00001d004396_circ_g.5 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d004396_T036:9
Zm00001d004396_T019:10
Zm00001d004396_T048:10
Zm00001d004396_T004:10
Zm00001d004396_T021:10
Zm00001d004396_T034:10
Zm00001d004396_T049:10
Zm00001d004396_T027:10
Zm00001d004396_T018:10
Zm00001d004396_T014:10
Zm00001d004396_T031:9
Zm00001d004396_T016:10
Zm00001d004396_T012:10
Zm00001d004396_T007:10
Zm00001d004396_T045:10
Zm00001d004396_T025:10
Zm00001d004396_T028:10
Zm00001d004396_T038:10
Zm00001d004396_T043:10
Zm00001d004396_T003:10
Zm00001d004396_T009:10
Zm00001d004396_T047:10
Zm00001d004396_T033:10
Zm00001d004396_T002:10
Zm00001d004396_T023:5
Zm00001d004396_T041:10
Zm00001d004396_T029:10
Zm00001d004396_T040:10
Zm00001d004396_T006:10
Zm00001d004396_T039:8

General Information
CircRNA Name	Zm00001d004396_circ_g.6
ID in PlantcircBase	zma_circ_007244
Alias	Zm02circ00072, zma_circ_0000792, GRMZM2G137984_C2
Organism	Zea mays
Position	chr2: 108746786-108751424 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d004396
Parent gene annotation	Vacuolar protein sorting-associated protein 54 chloroplastic
Parent gene strand	-
Alternative splicing	Zm00001d004396_circ_g.1 Zm00001d004396_circ_g.2 Zm00001d004396_circ_g.3 Zm00001d004396_circ_g.4 Zm00001d004396_circ_g.5
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d004396_T036:9 Zm00001d004396_T019:10 Zm00001d004396_T048:10 Zm00001d004396_T004:10 Zm00001d004396_T021:10 Zm00001d004396_T034:10 Zm00001d004396_T049:10 Zm00001d004396_T027:10 Zm00001d004396_T018:10 Zm00001d004396_T014:10 Zm00001d004396_T031:9 Zm00001d004396_T016:10 Zm00001d004396_T012:10 Zm00001d004396_T007:10 Zm00001d004396_T045:10 Zm00001d004396_T025:10 Zm00001d004396_T028:10 Zm00001d004396_T038:10 Zm00001d004396_T043:10 Zm00001d004396_T003:10 Zm00001d004396_T009:10 Zm00001d004396_T047:10 Zm00001d004396_T033:10 Zm00001d004396_T002:10 Zm00001d004396_T023:5 Zm00001d004396_T041:10 Zm00001d004396_T029:10 Zm00001d004396_T040:10 Zm00001d004396_T006:10 Zm00001d004396_T039:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTAAAACTGGGAGTAACTCTCCTACTGTGGTTTTGATTGAAGCTTTCATAACAGTTATAAGTGT
ATCCCGGTAAATTCTGAGAACAGCAGGAAGTTTGTCctttgtaacagctttagcaaattgactc
ggctgcacgtcattatcctctgggccattccagccttccacaatttggggtaattttctaagat
ttgcaagc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1569
Transcript exons: 108746786-108746947,108747071-108747150,108747715-108747
796,108748127-108748280,108749027-108749370,108749966-10
8750049,108750141-108750312,108750484-108750728,10875108
7-108751175,108751268-108751424
CTTTGTAACAGCTTTAGCAAATTGACTCGGCTGCACGTCATTATCCTCTGGGCCATTCCAGCCT
TCCACAATTTGGGGTAATTTTCTAAGATTTGCAAGCAACCTCTCTCTCATTATCTGGACAAGTT
TGTTGTGAATTTCATCTCGATGGATCTTGTAGTCCTGAGCTACTCTATCCAGCTCAGACATTAA
CAGATGTTTGCGCGCTTCAGGTATTTTCAGGAAAAGTACTCGCCTGATATCTGGAATTAAAGAA
TGCATAAAACTAATGATTTGACTCGCCAAAGCTAAATGTTTGGACGTAATTGATTTAAGTCCAG
ACACCTGCATGGCTCCTGCACCGAGAACAAGTTGGCAAGTCCTAGTGTTGAAAAGCTTTAATAT
TTCCACAACACGTTGGACCACCTCCAAAGATAGTGATGGTAAACATTTACTGATGTCAACGTAT
TCGGATAACATCTTCAACAGTATTAAACCACAGTTTACCATATGATAGCCAACACCTCCATGTA
CAATCGTTTGCAAGGTGGACTTTAGATTCCCGGCAACATTATTTTCAGTCTGTGAAGTGAATTC
AACCTTGTTTTCACCAGTCCCGGATGTTACTTTGCCATTATCAGCAATATTTTTAGCTGAATAT
GTCGGTTCTTGACTTGTAGACCGATGATCACTAAACTTTGAGTTATCATCAGTGCTAGGCATCT
CCATGCCATTAACAGAAGAATAAGTGGATGAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGG
AACATCCACAGCAACCCACGTCTCTTGATCTAGAACTGCCTTGATTTTTGTCATCCGAACATTA
TGCTGATAATCAACGAATTGCTTCGATTGTTGATGTAGGATTCCACGAATGTTGTAACCCAACC
TGCCTCCAATCTTTTCTGTAGCAGCTATAAATTCTTCTGTTATGTTGTAGATGATCAAGAATTC
TTGAAGCCTTAACCTGGGATGTAAAGCAGAACGAACACCTAGCAGCTTAGCCCACCGTCCATGG
GCAGCATCACAAGCCGCGAAAACTGCTTCAGTGTTCTCTCTCAAGACATCAGCCCGAACATTCT
TTAACGAATTTATAATGGAAAAATCATTTGTTTTTCCTTGGACAAATGGGATCTTGGAAGTACT
CCGTGTAAGAGTATTAGAGCCTCTTGAAGAGTCATTTTCTTGGGTATCAGGAATAACTGTACCA
CCATGTTGTAACGTAGGATTACTAGCATCAACACCTAACGTTCCATCAAGGTTTCCCATGACCC
ACTCAACTATTCTTTTCACTTCAGCTGCTTGCTGTAAATGTACCTGTACTATCCTGAAAATGGC
AGATAAAAGTTGAACAAATCCTTCAGATGAAAGACTCCGCAACTTATTTGCTAAGGACTGGCCT
CCAGCATCAGCATCGGTAGCTCTGTCTCCAGTTACTGAGTCAGAATCTATTGGTCTGGCAGTTA
AAACTGGGAGTAACTCTCCTACTGTGGTTTTGATTGAAGCTTTCATAACAGTTATAAGTGTATC
CCGGTAAATTCTGAGAACAGCAGGAAGTTTGTC
						
					

						Genomic sequence
						
							CTTTGTAACAGCTTTAGCAAATTGACTCGGCTGCACGTCATTATCCTCTGGGCCATTCCAGCCT
TCCACAATTTGGGGTAATTTTCTAAGATTTGCAAGCAACCTCTCTCTCATTATCTGGACAAGTT
TGTTGTGAATTTCATCTCGATGGATCTTGTAGTCCTGTTATTTCATTTAAAAAACTTCTATGAA
AATGCATTCGTGAAAGGACAAGAAAGGATAGTTGCACTCAAGACTCATGAATCGCTGTGACTCA
AATGCCAATATAAAAAATTGGAATTGCACCTGAGCTACTCTATCCAGCTCAGACATTAACAGAT
GTTTGCGCGCTTCAGGTATTTTCAGGAAAAGTACTCGCCTGATATCTGCAGTTTCAAGGAAAAC
TTATAAAAACTGGAAAGAAAATATATCATGGTCACTCACTGCATTTCACAGCATATATCCCATC
ACTCGAGTTGGCCTGCCATCATTTTTGTATACAAGATTGTAGCTAGTACTAGTTATTAGTGTTT
GAACTCTTTAATATGTAAGAGACTCAATTGTACCATGTGATTAATATGAAGCTATGAGCACGTG
TGGTCATTTCTCAGTTTTGTATGAGACTTAGTTCTCCTTGGGTCTGTGTCTTGTAGCTATAGAG
TATGGACATTAGTACTTCAAAATTTTATGGAAGTAGGATCCAAAAATAGCAAATCAATACAGTG
CATGTTTGGTTCCTAGCATCAGCAATTCAGTGCAGCAAAAGAAAAATCATGACAAACTCGTGGG
GTAATTACAGTTTGGACATACTGTGCTAAAAAAATTTAATTGGTTAGGCAGTAGACTTGTATGA
AAAACACATGGTCTTTAGAACTCCAGTAGCTAAGCATCCTGAAGTACTCCAAGAATGTAGAAAT
GGTAATTTGTAGAAGATTAAAATAAATGGTTACCTGGAATTAAAGAATGCATAAAACTAATGAT
TTGACTCGCCAAAGCTAAATGTTTGGACGTAATTGATTTAAGTCCAGACACCTGAGAAGCAAAA
CAGAAATAAAAAGGTCAGTAAATTAGGAGTATTGCAAGGAAGAAAACTGAGCTTCTAAATCAAA
AAGCTCTTGAGGTTGGTATTGGCTGTACTGAAAAATAAATAAAAATTGATTAAAATAGTGTCCA
AATAGGAACAGCTTATTTTGCAACTAGTTGTTCCATGCAGTGATGCATGTGATTCAGTGTATGC
ACCTCAGGTTGTTTAAAAAATGCAGACATTACTCACGTCAAGTGAAAATCACATTAAACATTTG
TATACAGTTGCCAATGAAATAAAGAGGCATTCTTAATAACTGAAATGGCATGCTGATATACCTG
CATGGCTCCTGCACCGAGAACAAGTTGGCAAGTCCTAGTGTTGAAAAGCTTTAATATTTCCACA
ACACGTTGGACCACCTCCAAAGATAGTGATGGTAAACATTTACTGATGTCAACGTATTCGGATA
ACATCTTCAACAGTATTAAACCACTGCAAAACCAATAAAGCATTGTTAGAGAGAGGCATGGGTT
CCAAAAGAAGAAAATATTTTTCCTAAAATGCACAGGAGAGCTGTGCATCATTATATTAAGGCCC
CGTTTGGTTTGAGATTAGTCCCTCCATTTTAGTCTCATTTAGTCCCTAAATAGCCAAACGGTGT
GACTAAAAGGGACTAAACCATATTAATTCCACCTTTTGCGTCTCAATTATTTCAGTTGCGCTGA
TGGCGGGACAATGTTAAAGGACATTTTAGTCTTCTCATGAGTCATTTAATGTGTTCTGAATATA
TTTATAGTCTCTGCAACCAAACAGGGCAGGGACTAAACTTTAGTCCCTCGACTAAACTTTAGTC
CCTTGACTAAATGAACCAAACAGGCCCTAAGAATAGATGAGTTCCAAAACAGACCAGTACAAGA
AATAAAGAAGCCACCTTACGGTGGCCAAAACAGAAAATACATAAAGGAGTCGATAACTACTCCA
AGGATACTACCACAGCCTAACCTCCAAGAAGAAAATATTTTTATATTAAAGAAACAACTTAGAA
CAGTGAACTCAAAATAACGAGAACAAATCAATAAATACATGCCTGTAACAAATACTACTATTTA
TTTAAACTAAATTTACAGAATACAGACTGATAGCTACCCAACAGTCAAACACATTTCATTTCAG
CAGCGCAAAGTTCATAAGTAGAGACTAAATATCGAATTATTGAAAGGTAAATATAGATGACTAA
CCAGTTTACCATATGATAGCCAACACCTCCATGTACAATCGTTTGCAAGGTGGACTTTAGATTC
CCGGCAACATTATTTTCAGTCTGTGAAGTGAATTCAACCTTGTTTTCACCAGTCCCGGATGTTA
CTTTGCCATTATCAGCAATATTTTTAGCTGAATATGTCGGTTCTTGACTTGTAGACCGATGATC
ACTAAACTTTGAGTTATCATCAGTGCTAGGCATCTCCATGCCATTAACAGAAGAATAAGTGGAT
GAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGGAACATCCACAGCAACCCACGTCTCTTGAT
CTAGAACTGCCTTGATTTTTGTCATCTTAAAAAAATAATGAAAGTTTTTAGTTTCAAAAATTAG
GGGAAAGGGAAACACAATTTAGTTTAGCTAGTCTTAACTATCAAGGGCCTTGGATAATCCAAAA
CTCACATGATTTGACTTTTGAACAGCCAGAGAAGATGAACTTCATTAATTGAAATATATTATTC
CACCACCATTTTGATCTAAAAAATAGTTCCCTTCGTTCCAAATTATGTCATTCTAGCTTTTCTA
GATACATAATAAAAGCTAGTATCTAGACATAGTGTATATCTAGATGCATAACAATTTAACAAAA
TTTATGTATCTATAAAAGTTAGAACAACTTGTAATTCAAAATGGAGGGGGGTATTTCAAAGTAA
AGATCAACTATTGATAATGTAAAAATGGGTATAATAATCAAATTGAGCATCCGTGCTGTATTCA
ACTTGATGGACAACCAGTCATCCATAACTGAGGGAAAGTTAAGTGATTTTTTTCCATTCAATAA
TGATGGTCAATAATTGTTTTGGAAGTTTCTAATCAAATAGGTGAAATTTGAATAATAGGGTTTA
ACTTCAACCGTTCAACGACATAACTGCAACATTGTTTTACTGACCCGAACATTATGCTGATAAT
CAACGAATTGCTTCGATTGTTGATGTAGGATTCCACGAATGTTGTAACCCAACCTGCCTCCAAT
CTACAAGAATAAGAGGCTAAGATAACATATAACTTGCTTATATGCAATAAATGCAAATGATTTT
GTGTATTTAATCCAAACAAGACGTAACCTTTTCTGTAGCAGCTATAAATTCTTCTGTTATGTTG
TAGATGATCAAGAATTCTTGAAGCCTTAACCTGGGATGTAAAGCAGAACGAACACCTAGCAGCT
TAGCCCACCGTCCATGGGCAGCATCACAAGCCGCGAAAACTGCTTCAGTGTTCTCTCTCAAGAC
ATCAGCCCTGCATGAAATGATAAATTGTGATAATCTGCTATAGTAACTGATCACAGGCATACCG
TGACATCAGAAATGAACTTATAATTTGCATCTTCACATGGAATAGACAATAGAGCTTATAATTT
GCATCTTCACATGGAATAGACAATAGAGGGCAAGTTGCAGCTTAACTTACCGAACATTCTTTAA
CGAATTTATAATGGAAAAATCATTTGTTTTTCCTTGGACAAATGGGATCTTGGAAGTACTCCGT
GTAAGAGTATTAGAGCCTCTTGAAGAGTCATTTTCTTGGGTATCAGGAATAACTGTACCACCAT
GTTGTAACGTAGGATTACTAGCATCAACACCTAACGTTCCATCAAGGTTTCCCATGACCCACTC
AACTATTCTTTTCACTTCAGCTGCTTGCTGTAAATGTACCTGAAATCATAAAGATGTCGAAGCC
ATTATTGTGTGTGTGTGTTTGGGGGGGGGGGGGGGGGGTAACTAACATATGGTACCTAGTGGCC
AATTTGTATTTGATGTGCACCCATTTAATACAAAATCACATGTCATGAAAACAAATTAAACAAT
CAGGACATAGGCTATAGAGGGCAACATAAAGATTGCTTAGCTGAACCAAGTAAACCTCAATAAG
GGATAAAAACAGTGCAGGGCTTATCCAAGTATACTTTATCCCTGAACACAAGAGCTAATTTACC
CAGGATCAAATTTTCCTAGGATCTTTGTCCCAACTCCCAAAATAGGAAAATGGAATTCTTATTA
AGAGTTAATTTACCTGTACTATCCTGAAAATGGCAGATAAAAGTTGAACAAATCCTTCAGATGA
AAGACTCCGCAACTTATTTGCTAAGGACTGGCCTCCAGCTGCAGTACGTTAAAAGGTCAACAGG
CATAGAAAGGTTAACATAAAAAATGAAAAACTCAGAAAAGAGATAGTGACTGGGTGCAAATAAT
ACCATCAGCATCGGTAGCTCTGTCTCCAGTTACTGAGTCAGAATCTATTGGTCTGGCAGTTAAA
ACTGGGAGTAACTCTCCTACTGTGGTTTTGATTGAAGCTTTCATAACAGTTATAAGTGTATCCC
GGTAAATTCTGAGAACAGCAGGAAGTTTGTC
						
					

			
		

Sequences
Splice junction sequence	TTAAAACTGGGAGTAACTCTCCTACTGTGGTTTTGATTGAAGCTTTCATAACAGTTATAAGTGT ATCCCGGTAAATTCTGAGAACAGCAGGAAGTTTGTCctttgtaacagctttagcaaattgactc ggctgcacgtcattatcctctgggccattccagccttccacaatttggggtaattttctaagat ttgcaagc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1569 Transcript exons: 108746786-108746947,108747071-108747150,108747715-108747 796,108748127-108748280,108749027-108749370,108749966-10 8750049,108750141-108750312,108750484-108750728,10875108 7-108751175,108751268-108751424 CTTTGTAACAGCTTTAGCAAATTGACTCGGCTGCACGTCATTATCCTCTGGGCCATTCCAGCCT TCCACAATTTGGGGTAATTTTCTAAGATTTGCAAGCAACCTCTCTCTCATTATCTGGACAAGTT TGTTGTGAATTTCATCTCGATGGATCTTGTAGTCCTGAGCTACTCTATCCAGCTCAGACATTAA CAGATGTTTGCGCGCTTCAGGTATTTTCAGGAAAAGTACTCGCCTGATATCTGGAATTAAAGAA TGCATAAAACTAATGATTTGACTCGCCAAAGCTAAATGTTTGGACGTAATTGATTTAAGTCCAG ACACCTGCATGGCTCCTGCACCGAGAACAAGTTGGCAAGTCCTAGTGTTGAAAAGCTTTAATAT TTCCACAACACGTTGGACCACCTCCAAAGATAGTGATGGTAAACATTTACTGATGTCAACGTAT TCGGATAACATCTTCAACAGTATTAAACCACAGTTTACCATATGATAGCCAACACCTCCATGTA CAATCGTTTGCAAGGTGGACTTTAGATTCCCGGCAACATTATTTTCAGTCTGTGAAGTGAATTC AACCTTGTTTTCACCAGTCCCGGATGTTACTTTGCCATTATCAGCAATATTTTTAGCTGAATAT GTCGGTTCTTGACTTGTAGACCGATGATCACTAAACTTTGAGTTATCATCAGTGCTAGGCATCT CCATGCCATTAACAGAAGAATAAGTGGATGAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGG AACATCCACAGCAACCCACGTCTCTTGATCTAGAACTGCCTTGATTTTTGTCATCCGAACATTA TGCTGATAATCAACGAATTGCTTCGATTGTTGATGTAGGATTCCACGAATGTTGTAACCCAACC TGCCTCCAATCTTTTCTGTAGCAGCTATAAATTCTTCTGTTATGTTGTAGATGATCAAGAATTC TTGAAGCCTTAACCTGGGATGTAAAGCAGAACGAACACCTAGCAGCTTAGCCCACCGTCCATGG GCAGCATCACAAGCCGCGAAAACTGCTTCAGTGTTCTCTCTCAAGACATCAGCCCGAACATTCT TTAACGAATTTATAATGGAAAAATCATTTGTTTTTCCTTGGACAAATGGGATCTTGGAAGTACT CCGTGTAAGAGTATTAGAGCCTCTTGAAGAGTCATTTTCTTGGGTATCAGGAATAACTGTACCA CCATGTTGTAACGTAGGATTACTAGCATCAACACCTAACGTTCCATCAAGGTTTCCCATGACCC ACTCAACTATTCTTTTCACTTCAGCTGCTTGCTGTAAATGTACCTGTACTATCCTGAAAATGGC AGATAAAAGTTGAACAAATCCTTCAGATGAAAGACTCCGCAACTTATTTGCTAAGGACTGGCCT CCAGCATCAGCATCGGTAGCTCTGTCTCCAGTTACTGAGTCAGAATCTATTGGTCTGGCAGTTA AAACTGGGAGTAACTCTCCTACTGTGGTTTTGATTGAAGCTTTCATAACAGTTATAAGTGTATC CCGGTAAATTCTGAGAACAGCAGGAAGTTTGTC
Genomic sequence	CTTTGTAACAGCTTTAGCAAATTGACTCGGCTGCACGTCATTATCCTCTGGGCCATTCCAGCCT TCCACAATTTGGGGTAATTTTCTAAGATTTGCAAGCAACCTCTCTCTCATTATCTGGACAAGTT TGTTGTGAATTTCATCTCGATGGATCTTGTAGTCCTGTTATTTCATTTAAAAAACTTCTATGAA AATGCATTCGTGAAAGGACAAGAAAGGATAGTTGCACTCAAGACTCATGAATCGCTGTGACTCA AATGCCAATATAAAAAATTGGAATTGCACCTGAGCTACTCTATCCAGCTCAGACATTAACAGAT GTTTGCGCGCTTCAGGTATTTTCAGGAAAAGTACTCGCCTGATATCTGCAGTTTCAAGGAAAAC TTATAAAAACTGGAAAGAAAATATATCATGGTCACTCACTGCATTTCACAGCATATATCCCATC ACTCGAGTTGGCCTGCCATCATTTTTGTATACAAGATTGTAGCTAGTACTAGTTATTAGTGTTT GAACTCTTTAATATGTAAGAGACTCAATTGTACCATGTGATTAATATGAAGCTATGAGCACGTG TGGTCATTTCTCAGTTTTGTATGAGACTTAGTTCTCCTTGGGTCTGTGTCTTGTAGCTATAGAG TATGGACATTAGTACTTCAAAATTTTATGGAAGTAGGATCCAAAAATAGCAAATCAATACAGTG CATGTTTGGTTCCTAGCATCAGCAATTCAGTGCAGCAAAAGAAAAATCATGACAAACTCGTGGG GTAATTACAGTTTGGACATACTGTGCTAAAAAAATTTAATTGGTTAGGCAGTAGACTTGTATGA AAAACACATGGTCTTTAGAACTCCAGTAGCTAAGCATCCTGAAGTACTCCAAGAATGTAGAAAT GGTAATTTGTAGAAGATTAAAATAAATGGTTACCTGGAATTAAAGAATGCATAAAACTAATGAT TTGACTCGCCAAAGCTAAATGTTTGGACGTAATTGATTTAAGTCCAGACACCTGAGAAGCAAAA CAGAAATAAAAAGGTCAGTAAATTAGGAGTATTGCAAGGAAGAAAACTGAGCTTCTAAATCAAA AAGCTCTTGAGGTTGGTATTGGCTGTACTGAAAAATAAATAAAAATTGATTAAAATAGTGTCCA AATAGGAACAGCTTATTTTGCAACTAGTTGTTCCATGCAGTGATGCATGTGATTCAGTGTATGC ACCTCAGGTTGTTTAAAAAATGCAGACATTACTCACGTCAAGTGAAAATCACATTAAACATTTG TATACAGTTGCCAATGAAATAAAGAGGCATTCTTAATAACTGAAATGGCATGCTGATATACCTG CATGGCTCCTGCACCGAGAACAAGTTGGCAAGTCCTAGTGTTGAAAAGCTTTAATATTTCCACA ACACGTTGGACCACCTCCAAAGATAGTGATGGTAAACATTTACTGATGTCAACGTATTCGGATA ACATCTTCAACAGTATTAAACCACTGCAAAACCAATAAAGCATTGTTAGAGAGAGGCATGGGTT CCAAAAGAAGAAAATATTTTTCCTAAAATGCACAGGAGAGCTGTGCATCATTATATTAAGGCCC CGTTTGGTTTGAGATTAGTCCCTCCATTTTAGTCTCATTTAGTCCCTAAATAGCCAAACGGTGT GACTAAAAGGGACTAAACCATATTAATTCCACCTTTTGCGTCTCAATTATTTCAGTTGCGCTGA TGGCGGGACAATGTTAAAGGACATTTTAGTCTTCTCATGAGTCATTTAATGTGTTCTGAATATA TTTATAGTCTCTGCAACCAAACAGGGCAGGGACTAAACTTTAGTCCCTCGACTAAACTTTAGTC CCTTGACTAAATGAACCAAACAGGCCCTAAGAATAGATGAGTTCCAAAACAGACCAGTACAAGA AATAAAGAAGCCACCTTACGGTGGCCAAAACAGAAAATACATAAAGGAGTCGATAACTACTCCA AGGATACTACCACAGCCTAACCTCCAAGAAGAAAATATTTTTATATTAAAGAAACAACTTAGAA CAGTGAACTCAAAATAACGAGAACAAATCAATAAATACATGCCTGTAACAAATACTACTATTTA TTTAAACTAAATTTACAGAATACAGACTGATAGCTACCCAACAGTCAAACACATTTCATTTCAG CAGCGCAAAGTTCATAAGTAGAGACTAAATATCGAATTATTGAAAGGTAAATATAGATGACTAA CCAGTTTACCATATGATAGCCAACACCTCCATGTACAATCGTTTGCAAGGTGGACTTTAGATTC CCGGCAACATTATTTTCAGTCTGTGAAGTGAATTCAACCTTGTTTTCACCAGTCCCGGATGTTA CTTTGCCATTATCAGCAATATTTTTAGCTGAATATGTCGGTTCTTGACTTGTAGACCGATGATC ACTAAACTTTGAGTTATCATCAGTGCTAGGCATCTCCATGCCATTAACAGAAGAATAAGTGGAT GAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGGAACATCCACAGCAACCCACGTCTCTTGAT CTAGAACTGCCTTGATTTTTGTCATCTTAAAAAAATAATGAAAGTTTTTAGTTTCAAAAATTAG GGGAAAGGGAAACACAATTTAGTTTAGCTAGTCTTAACTATCAAGGGCCTTGGATAATCCAAAA CTCACATGATTTGACTTTTGAACAGCCAGAGAAGATGAACTTCATTAATTGAAATATATTATTC CACCACCATTTTGATCTAAAAAATAGTTCCCTTCGTTCCAAATTATGTCATTCTAGCTTTTCTA GATACATAATAAAAGCTAGTATCTAGACATAGTGTATATCTAGATGCATAACAATTTAACAAAA TTTATGTATCTATAAAAGTTAGAACAACTTGTAATTCAAAATGGAGGGGGGTATTTCAAAGTAA AGATCAACTATTGATAATGTAAAAATGGGTATAATAATCAAATTGAGCATCCGTGCTGTATTCA ACTTGATGGACAACCAGTCATCCATAACTGAGGGAAAGTTAAGTGATTTTTTTCCATTCAATAA TGATGGTCAATAATTGTTTTGGAAGTTTCTAATCAAATAGGTGAAATTTGAATAATAGGGTTTA ACTTCAACCGTTCAACGACATAACTGCAACATTGTTTTACTGACCCGAACATTATGCTGATAAT CAACGAATTGCTTCGATTGTTGATGTAGGATTCCACGAATGTTGTAACCCAACCTGCCTCCAAT CTACAAGAATAAGAGGCTAAGATAACATATAACTTGCTTATATGCAATAAATGCAAATGATTTT GTGTATTTAATCCAAACAAGACGTAACCTTTTCTGTAGCAGCTATAAATTCTTCTGTTATGTTG TAGATGATCAAGAATTCTTGAAGCCTTAACCTGGGATGTAAAGCAGAACGAACACCTAGCAGCT TAGCCCACCGTCCATGGGCAGCATCACAAGCCGCGAAAACTGCTTCAGTGTTCTCTCTCAAGAC ATCAGCCCTGCATGAAATGATAAATTGTGATAATCTGCTATAGTAACTGATCACAGGCATACCG TGACATCAGAAATGAACTTATAATTTGCATCTTCACATGGAATAGACAATAGAGCTTATAATTT GCATCTTCACATGGAATAGACAATAGAGGGCAAGTTGCAGCTTAACTTACCGAACATTCTTTAA CGAATTTATAATGGAAAAATCATTTGTTTTTCCTTGGACAAATGGGATCTTGGAAGTACTCCGT GTAAGAGTATTAGAGCCTCTTGAAGAGTCATTTTCTTGGGTATCAGGAATAACTGTACCACCAT GTTGTAACGTAGGATTACTAGCATCAACACCTAACGTTCCATCAAGGTTTCCCATGACCCACTC AACTATTCTTTTCACTTCAGCTGCTTGCTGTAAATGTACCTGAAATCATAAAGATGTCGAAGCC ATTATTGTGTGTGTGTGTTTGGGGGGGGGGGGGGGGGGTAACTAACATATGGTACCTAGTGGCC AATTTGTATTTGATGTGCACCCATTTAATACAAAATCACATGTCATGAAAACAAATTAAACAAT CAGGACATAGGCTATAGAGGGCAACATAAAGATTGCTTAGCTGAACCAAGTAAACCTCAATAAG GGATAAAAACAGTGCAGGGCTTATCCAAGTATACTTTATCCCTGAACACAAGAGCTAATTTACC CAGGATCAAATTTTCCTAGGATCTTTGTCCCAACTCCCAAAATAGGAAAATGGAATTCTTATTA AGAGTTAATTTACCTGTACTATCCTGAAAATGGCAGATAAAAGTTGAACAAATCCTTCAGATGA AAGACTCCGCAACTTATTTGCTAAGGACTGGCCTCCAGCTGCAGTACGTTAAAAGGTCAACAGG CATAGAAAGGTTAACATAAAAAATGAAAAACTCAGAAAAGAGATAGTGACTGGGTGCAAATAAT ACCATCAGCATCGGTAGCTCTGTCTCCAGTTACTGAGTCAGAATCTATTGGTCTGGCAGTTAAA ACTGGGAGTAACTCTCCTACTGTGGTTTTGATTGAAGCTTTCATAACAGTTATAAGTGTATCCC GGTAAATTCTGAGAACAGCAGGAAGTTTGTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.15876768

Conservation Information
Conserved circRNAs	NA
PMCS	0.15876768

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							108751375-108746788(-)
108746843-108751381(-)
						
					

						Potential amino acid sequence
						
							MKASIKTTVGELLPVLTARPIDSDSVTGDRATDADAGGQSLANKLRSLSSEGFVQLLSAIFRIV
QVHLQQAAEVKRIVEWVMGNLDGTLGVDASNPTLQHGGTVIPDTQENDSSRGSNTLTRSTSKIP
FVQGKTNDFSIINSLKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRSALHPRLRLQEFLIIY
NITEEFIAATEKIGGRLGYNIRGILHQQSKQFVDYQHNVRMTKIKAVLDQETWVAVDVPEEFQA
IVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKNIADNGKVTSGTGENKVEFTSQT
ENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSLEVVQRVVEILKLFN
TRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPDIRRVLFLKIPEARKHLLMSELD
RVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPSQFAKAVTKDKLPAV
LRIYRDTLITVMKASIKTTVGELLPVLTARPIDSDSVTGDRATDADAGGQSLANKLRSLSSEGF
VQLLSAIFRIVQVHLQQAAEVKRIVEWVMGNLDGTLGVDASNPTLQHGGTVIPDTQENDSSRGS
NTLTRSTSKIPFVQGKTNDFSIINSLKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRSALHP
RLRLQEFLIIYNITEEFIAATEKIGGRLGYNIRGILHQQSKQFVDYQHNVRMTKIKAVLDQETW
VAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKNIADNGKVTSGT
GENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSLEVV
QRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPDIRRVLFLKIPE
ARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPSQFA
KAVTKDKLPAVLRIYRDTLITVMKASIKTTVGELLPVLTARPIDSDSVTGDRATDADAGGQSLA
NKLRSLSSEGFVQLLSAIFRIVQVHLQQAAEVKRIVEWVMGNLDGTLGVDASNPTLQHGGTVIP
DTQENDSSRGSNTLTRSTSKIPFVQGKTNDFSIINSLKNVRADVLRENTEAVFAACDAAHGRWA
KLLGVRSALHPRLRLQEFLIIYNITEEFIAATEKIGGRLGYNIRGILHQQSKQFVDYQHNVRMT
KIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKN
IADNGKVTSGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDIS
KCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPD
IRRVLFLKIPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGP
EDNDVQPSQFAKAVTKDKLPAVLRIYRDTLITVMKASIKTTVGELLPVLTARPIDSDSVTGDRA
TDADAGGQSLANKLRSLSSEGFVQLLSAIFRIVQVHLQQAAEVKRIVEWVMGNLDGTLGVDASN
PTLQHGGTVIPDTQENDSSRGSNTLTRSTSKIPFVQGKTNDFSIINSLKNVRADVLRENTEAVF
AACDAAHGRWAKLLGVRSALHPRLRLQEFLIIYNITEEFIAATEKIGGRLGYNIRGILHQQSKQ
FVDYQHNVRMTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRS
TSQEPTYSAKNIADNGKVTSGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLIL
LKMLSEYVDISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQ
IISFMHSLIPDIRRVLFLKIPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRK
LPQIVEGWNGPEDNDVQPSQFAKAVTK(-)
MAQRIMTCSRVNLLKLLQRTNFLLFSEFTGIHL*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	108751375-108746788(-) 108746843-108751381(-)
Potential amino acid sequence	MKASIKTTVGELLPVLTARPIDSDSVTGDRATDADAGGQSLANKLRSLSSEGFVQLLSAIFRIV QVHLQQAAEVKRIVEWVMGNLDGTLGVDASNPTLQHGGTVIPDTQENDSSRGSNTLTRSTSKIP FVQGKTNDFSIINSLKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRSALHPRLRLQEFLIIY NITEEFIAATEKIGGRLGYNIRGILHQQSKQFVDYQHNVRMTKIKAVLDQETWVAVDVPEEFQA IVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKNIADNGKVTSGTGENKVEFTSQT ENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSLEVVQRVVEILKLFN TRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPDIRRVLFLKIPEARKHLLMSELD RVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPSQFAKAVTKDKLPAV LRIYRDTLITVMKASIKTTVGELLPVLTARPIDSDSVTGDRATDADAGGQSLANKLRSLSSEGF VQLLSAIFRIVQVHLQQAAEVKRIVEWVMGNLDGTLGVDASNPTLQHGGTVIPDTQENDSSRGS NTLTRSTSKIPFVQGKTNDFSIINSLKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRSALHP RLRLQEFLIIYNITEEFIAATEKIGGRLGYNIRGILHQQSKQFVDYQHNVRMTKIKAVLDQETW VAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKNIADNGKVTSGT GENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSLEVV QRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPDIRRVLFLKIPE ARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPSQFA KAVTKDKLPAVLRIYRDTLITVMKASIKTTVGELLPVLTARPIDSDSVTGDRATDADAGGQSLA NKLRSLSSEGFVQLLSAIFRIVQVHLQQAAEVKRIVEWVMGNLDGTLGVDASNPTLQHGGTVIP DTQENDSSRGSNTLTRSTSKIPFVQGKTNDFSIINSLKNVRADVLRENTEAVFAACDAAHGRWA KLLGVRSALHPRLRLQEFLIIYNITEEFIAATEKIGGRLGYNIRGILHQQSKQFVDYQHNVRMT KIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKN IADNGKVTSGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDIS KCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPD IRRVLFLKIPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGP EDNDVQPSQFAKAVTKDKLPAVLRIYRDTLITVMKASIKTTVGELLPVLTARPIDSDSVTGDRA TDADAGGQSLANKLRSLSSEGFVQLLSAIFRIVQVHLQQAAEVKRIVEWVMGNLDGTLGVDASN PTLQHGGTVIPDTQENDSSRGSNTLTRSTSKIPFVQGKTNDFSIINSLKNVRADVLRENTEAVF AACDAAHGRWAKLLGVRSALHPRLRLQEFLIIYNITEEFIAATEKIGGRLGYNIRGILHQQSKQ FVDYQHNVRMTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRS TSQEPTYSAKNIADNGKVTSGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLIL LKMLSEYVDISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQ IISFMHSLIPDIRRVLFLKIPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRK LPQIVEGWNGPEDNDVQPSQFAKAVTK(-) MAQRIMTCSRVNLLKLLQRTNFLLFSEFTGIHL*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d004396_circ_g.6

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