Plant Circular RNA Database

Detail information of Zm00001d004396_circ_g.5

			
						 General Information
					
						CircRNA Name
						Zm00001d004396_circ_g.5
					
						ID in PlantcircBase
						zma_circ_007243
					
						Alias
						zma_circ_0000766
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 108746786-108749370  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d004396						
					
						Parent gene annotation
						
							Vacuolar protein sorting-associated protein 54 chloroplastic
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d004396_circ_g.1 Zm00001d004396_circ_g.2 Zm00001d004396_circ_g.3 Zm00001d004396_circ_g.4 Zm00001d004396_circ_g.6 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d004396_T047:5
Zm00001d004396_T045:5
Zm00001d004396_T012:5
Zm00001d004396_T038:5
Zm00001d004396_T049:5
Zm00001d004396_T004:5
Zm00001d004396_T040:5
Zm00001d004396_T043:5
Zm00001d004396_T023:5
Zm00001d004396_T009:5
Zm00001d004396_T014:5
Zm00001d004396_T041:5
Zm00001d004396_T016:5
Zm00001d004396_T007:5
Zm00001d004396_T034:5
Zm00001d004396_T019:5
Zm00001d004396_T027:5
Zm00001d004396_T029:5
Zm00001d004396_T006:5
Zm00001d004396_T018:5
Zm00001d004396_T039:5
Zm00001d004396_T025:5
Zm00001d004396_T033:5
Zm00001d004396_T048:5
Zm00001d004396_T002:5
Zm00001d004396_T036:4
Zm00001d004396_T003:5
Zm00001d004396_T031:5
Zm00001d004396_T028:5
Zm00001d004396_T021:5

General Information
CircRNA Name	Zm00001d004396_circ_g.5
ID in PlantcircBase	zma_circ_007243
Alias	zma_circ_0000766
Organism	Zea mays
Position	chr2: 108746786-108749370 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d004396
Parent gene annotation	Vacuolar protein sorting-associated protein 54 chloroplastic
Parent gene strand	-
Alternative splicing	Zm00001d004396_circ_g.1 Zm00001d004396_circ_g.2 Zm00001d004396_circ_g.3 Zm00001d004396_circ_g.4 Zm00001d004396_circ_g.6
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d004396_T047:5 Zm00001d004396_T045:5 Zm00001d004396_T012:5 Zm00001d004396_T038:5 Zm00001d004396_T049:5 Zm00001d004396_T004:5 Zm00001d004396_T040:5 Zm00001d004396_T043:5 Zm00001d004396_T023:5 Zm00001d004396_T009:5 Zm00001d004396_T014:5 Zm00001d004396_T041:5 Zm00001d004396_T016:5 Zm00001d004396_T007:5 Zm00001d004396_T034:5 Zm00001d004396_T019:5 Zm00001d004396_T027:5 Zm00001d004396_T029:5 Zm00001d004396_T006:5 Zm00001d004396_T018:5 Zm00001d004396_T039:5 Zm00001d004396_T025:5 Zm00001d004396_T033:5 Zm00001d004396_T048:5 Zm00001d004396_T002:5 Zm00001d004396_T036:4 Zm00001d004396_T003:5 Zm00001d004396_T031:5 Zm00001d004396_T028:5 Zm00001d004396_T021:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATAAGTGGATGAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGGAACATCCACAGCAACCCA
CGTCTCTTGATCTAGAACTGCCTTGATTTTTGTCATctttgtaacagctttagcaaattgactc
ggctgcacgtcattatcctctgggccattccagccttccacaatttggggtaattttctaagat
ttgcaagc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 822
Transcript exons: 108746786-108746947,108747071-108747150,108747715-108747
796,108748127-108748280,108749027-108749370
CTTTGTAACAGCTTTAGCAAATTGACTCGGCTGCACGTCATTATCCTCTGGGCCATTCCAGCCT
TCCACAATTTGGGGTAATTTTCTAAGATTTGCAAGCAACCTCTCTCTCATTATCTGGACAAGTT
TGTTGTGAATTTCATCTCGATGGATCTTGTAGTCCTGAGCTACTCTATCCAGCTCAGACATTAA
CAGATGTTTGCGCGCTTCAGGTATTTTCAGGAAAAGTACTCGCCTGATATCTGGAATTAAAGAA
TGCATAAAACTAATGATTTGACTCGCCAAAGCTAAATGTTTGGACGTAATTGATTTAAGTCCAG
ACACCTGCATGGCTCCTGCACCGAGAACAAGTTGGCAAGTCCTAGTGTTGAAAAGCTTTAATAT
TTCCACAACACGTTGGACCACCTCCAAAGATAGTGATGGTAAACATTTACTGATGTCAACGTAT
TCGGATAACATCTTCAACAGTATTAAACCACAGTTTACCATATGATAGCCAACACCTCCATGTA
CAATCGTTTGCAAGGTGGACTTTAGATTCCCGGCAACATTATTTTCAGTCTGTGAAGTGAATTC
AACCTTGTTTTCACCAGTCCCGGATGTTACTTTGCCATTATCAGCAATATTTTTAGCTGAATAT
GTCGGTTCTTGACTTGTAGACCGATGATCACTAAACTTTGAGTTATCATCAGTGCTAGGCATCT
CCATGCCATTAACAGAAGAATAAGTGGATGAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGG
AACATCCACAGCAACCCACGTCTCTTGATCTAGAACTGCCTTGATTTTTGTCAT
						
					

						Genomic sequence
						
							CTTTGTAACAGCTTTAGCAAATTGACTCGGCTGCACGTCATTATCCTCTGGGCCATTCCAGCCT
TCCACAATTTGGGGTAATTTTCTAAGATTTGCAAGCAACCTCTCTCTCATTATCTGGACAAGTT
TGTTGTGAATTTCATCTCGATGGATCTTGTAGTCCTGTTATTTCATTTAAAAAACTTCTATGAA
AATGCATTCGTGAAAGGACAAGAAAGGATAGTTGCACTCAAGACTCATGAATCGCTGTGACTCA
AATGCCAATATAAAAAATTGGAATTGCACCTGAGCTACTCTATCCAGCTCAGACATTAACAGAT
GTTTGCGCGCTTCAGGTATTTTCAGGAAAAGTACTCGCCTGATATCTGCAGTTTCAAGGAAAAC
TTATAAAAACTGGAAAGAAAATATATCATGGTCACTCACTGCATTTCACAGCATATATCCCATC
ACTCGAGTTGGCCTGCCATCATTTTTGTATACAAGATTGTAGCTAGTACTAGTTATTAGTGTTT
GAACTCTTTAATATGTAAGAGACTCAATTGTACCATGTGATTAATATGAAGCTATGAGCACGTG
TGGTCATTTCTCAGTTTTGTATGAGACTTAGTTCTCCTTGGGTCTGTGTCTTGTAGCTATAGAG
TATGGACATTAGTACTTCAAAATTTTATGGAAGTAGGATCCAAAAATAGCAAATCAATACAGTG
CATGTTTGGTTCCTAGCATCAGCAATTCAGTGCAGCAAAAGAAAAATCATGACAAACTCGTGGG
GTAATTACAGTTTGGACATACTGTGCTAAAAAAATTTAATTGGTTAGGCAGTAGACTTGTATGA
AAAACACATGGTCTTTAGAACTCCAGTAGCTAAGCATCCTGAAGTACTCCAAGAATGTAGAAAT
GGTAATTTGTAGAAGATTAAAATAAATGGTTACCTGGAATTAAAGAATGCATAAAACTAATGAT
TTGACTCGCCAAAGCTAAATGTTTGGACGTAATTGATTTAAGTCCAGACACCTGAGAAGCAAAA
CAGAAATAAAAAGGTCAGTAAATTAGGAGTATTGCAAGGAAGAAAACTGAGCTTCTAAATCAAA
AAGCTCTTGAGGTTGGTATTGGCTGTACTGAAAAATAAATAAAAATTGATTAAAATAGTGTCCA
AATAGGAACAGCTTATTTTGCAACTAGTTGTTCCATGCAGTGATGCATGTGATTCAGTGTATGC
ACCTCAGGTTGTTTAAAAAATGCAGACATTACTCACGTCAAGTGAAAATCACATTAAACATTTG
TATACAGTTGCCAATGAAATAAAGAGGCATTCTTAATAACTGAAATGGCATGCTGATATACCTG
CATGGCTCCTGCACCGAGAACAAGTTGGCAAGTCCTAGTGTTGAAAAGCTTTAATATTTCCACA
ACACGTTGGACCACCTCCAAAGATAGTGATGGTAAACATTTACTGATGTCAACGTATTCGGATA
ACATCTTCAACAGTATTAAACCACTGCAAAACCAATAAAGCATTGTTAGAGAGAGGCATGGGTT
CCAAAAGAAGAAAATATTTTTCCTAAAATGCACAGGAGAGCTGTGCATCATTATATTAAGGCCC
CGTTTGGTTTGAGATTAGTCCCTCCATTTTAGTCTCATTTAGTCCCTAAATAGCCAAACGGTGT
GACTAAAAGGGACTAAACCATATTAATTCCACCTTTTGCGTCTCAATTATTTCAGTTGCGCTGA
TGGCGGGACAATGTTAAAGGACATTTTAGTCTTCTCATGAGTCATTTAATGTGTTCTGAATATA
TTTATAGTCTCTGCAACCAAACAGGGCAGGGACTAAACTTTAGTCCCTCGACTAAACTTTAGTC
CCTTGACTAAATGAACCAAACAGGCCCTAAGAATAGATGAGTTCCAAAACAGACCAGTACAAGA
AATAAAGAAGCCACCTTACGGTGGCCAAAACAGAAAATACATAAAGGAGTCGATAACTACTCCA
AGGATACTACCACAGCCTAACCTCCAAGAAGAAAATATTTTTATATTAAAGAAACAACTTAGAA
CAGTGAACTCAAAATAACGAGAACAAATCAATAAATACATGCCTGTAACAAATACTACTATTTA
TTTAAACTAAATTTACAGAATACAGACTGATAGCTACCCAACAGTCAAACACATTTCATTTCAG
CAGCGCAAAGTTCATAAGTAGAGACTAAATATCGAATTATTGAAAGGTAAATATAGATGACTAA
CCAGTTTACCATATGATAGCCAACACCTCCATGTACAATCGTTTGCAAGGTGGACTTTAGATTC
CCGGCAACATTATTTTCAGTCTGTGAAGTGAATTCAACCTTGTTTTCACCAGTCCCGGATGTTA
CTTTGCCATTATCAGCAATATTTTTAGCTGAATATGTCGGTTCTTGACTTGTAGACCGATGATC
ACTAAACTTTGAGTTATCATCAGTGCTAGGCATCTCCATGCCATTAACAGAAGAATAAGTGGAT
GAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGGAACATCCACAGCAACCCACGTCTCTTGAT
CTAGAACTGCCTTGATTTTTGTCAT
						
					

			
		

Sequences
Splice junction sequence	AATAAGTGGATGAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGGAACATCCACAGCAACCCA CGTCTCTTGATCTAGAACTGCCTTGATTTTTGTCATctttgtaacagctttagcaaattgactc ggctgcacgtcattatcctctgggccattccagccttccacaatttggggtaattttctaagat ttgcaagc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 822 Transcript exons: 108746786-108746947,108747071-108747150,108747715-108747 796,108748127-108748280,108749027-108749370 CTTTGTAACAGCTTTAGCAAATTGACTCGGCTGCACGTCATTATCCTCTGGGCCATTCCAGCCT TCCACAATTTGGGGTAATTTTCTAAGATTTGCAAGCAACCTCTCTCTCATTATCTGGACAAGTT TGTTGTGAATTTCATCTCGATGGATCTTGTAGTCCTGAGCTACTCTATCCAGCTCAGACATTAA CAGATGTTTGCGCGCTTCAGGTATTTTCAGGAAAAGTACTCGCCTGATATCTGGAATTAAAGAA TGCATAAAACTAATGATTTGACTCGCCAAAGCTAAATGTTTGGACGTAATTGATTTAAGTCCAG ACACCTGCATGGCTCCTGCACCGAGAACAAGTTGGCAAGTCCTAGTGTTGAAAAGCTTTAATAT TTCCACAACACGTTGGACCACCTCCAAAGATAGTGATGGTAAACATTTACTGATGTCAACGTAT TCGGATAACATCTTCAACAGTATTAAACCACAGTTTACCATATGATAGCCAACACCTCCATGTA CAATCGTTTGCAAGGTGGACTTTAGATTCCCGGCAACATTATTTTCAGTCTGTGAAGTGAATTC AACCTTGTTTTCACCAGTCCCGGATGTTACTTTGCCATTATCAGCAATATTTTTAGCTGAATAT GTCGGTTCTTGACTTGTAGACCGATGATCACTAAACTTTGAGTTATCATCAGTGCTAGGCATCT CCATGCCATTAACAGAAGAATAAGTGGATGAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGG AACATCCACAGCAACCCACGTCTCTTGATCTAGAACTGCCTTGATTTTTGTCAT
Genomic sequence	CTTTGTAACAGCTTTAGCAAATTGACTCGGCTGCACGTCATTATCCTCTGGGCCATTCCAGCCT TCCACAATTTGGGGTAATTTTCTAAGATTTGCAAGCAACCTCTCTCTCATTATCTGGACAAGTT TGTTGTGAATTTCATCTCGATGGATCTTGTAGTCCTGTTATTTCATTTAAAAAACTTCTATGAA AATGCATTCGTGAAAGGACAAGAAAGGATAGTTGCACTCAAGACTCATGAATCGCTGTGACTCA AATGCCAATATAAAAAATTGGAATTGCACCTGAGCTACTCTATCCAGCTCAGACATTAACAGAT GTTTGCGCGCTTCAGGTATTTTCAGGAAAAGTACTCGCCTGATATCTGCAGTTTCAAGGAAAAC TTATAAAAACTGGAAAGAAAATATATCATGGTCACTCACTGCATTTCACAGCATATATCCCATC ACTCGAGTTGGCCTGCCATCATTTTTGTATACAAGATTGTAGCTAGTACTAGTTATTAGTGTTT GAACTCTTTAATATGTAAGAGACTCAATTGTACCATGTGATTAATATGAAGCTATGAGCACGTG TGGTCATTTCTCAGTTTTGTATGAGACTTAGTTCTCCTTGGGTCTGTGTCTTGTAGCTATAGAG TATGGACATTAGTACTTCAAAATTTTATGGAAGTAGGATCCAAAAATAGCAAATCAATACAGTG CATGTTTGGTTCCTAGCATCAGCAATTCAGTGCAGCAAAAGAAAAATCATGACAAACTCGTGGG GTAATTACAGTTTGGACATACTGTGCTAAAAAAATTTAATTGGTTAGGCAGTAGACTTGTATGA AAAACACATGGTCTTTAGAACTCCAGTAGCTAAGCATCCTGAAGTACTCCAAGAATGTAGAAAT GGTAATTTGTAGAAGATTAAAATAAATGGTTACCTGGAATTAAAGAATGCATAAAACTAATGAT TTGACTCGCCAAAGCTAAATGTTTGGACGTAATTGATTTAAGTCCAGACACCTGAGAAGCAAAA CAGAAATAAAAAGGTCAGTAAATTAGGAGTATTGCAAGGAAGAAAACTGAGCTTCTAAATCAAA AAGCTCTTGAGGTTGGTATTGGCTGTACTGAAAAATAAATAAAAATTGATTAAAATAGTGTCCA AATAGGAACAGCTTATTTTGCAACTAGTTGTTCCATGCAGTGATGCATGTGATTCAGTGTATGC ACCTCAGGTTGTTTAAAAAATGCAGACATTACTCACGTCAAGTGAAAATCACATTAAACATTTG TATACAGTTGCCAATGAAATAAAGAGGCATTCTTAATAACTGAAATGGCATGCTGATATACCTG CATGGCTCCTGCACCGAGAACAAGTTGGCAAGTCCTAGTGTTGAAAAGCTTTAATATTTCCACA ACACGTTGGACCACCTCCAAAGATAGTGATGGTAAACATTTACTGATGTCAACGTATTCGGATA ACATCTTCAACAGTATTAAACCACTGCAAAACCAATAAAGCATTGTTAGAGAGAGGCATGGGTT CCAAAAGAAGAAAATATTTTTCCTAAAATGCACAGGAGAGCTGTGCATCATTATATTAAGGCCC CGTTTGGTTTGAGATTAGTCCCTCCATTTTAGTCTCATTTAGTCCCTAAATAGCCAAACGGTGT GACTAAAAGGGACTAAACCATATTAATTCCACCTTTTGCGTCTCAATTATTTCAGTTGCGCTGA TGGCGGGACAATGTTAAAGGACATTTTAGTCTTCTCATGAGTCATTTAATGTGTTCTGAATATA TTTATAGTCTCTGCAACCAAACAGGGCAGGGACTAAACTTTAGTCCCTCGACTAAACTTTAGTC CCTTGACTAAATGAACCAAACAGGCCCTAAGAATAGATGAGTTCCAAAACAGACCAGTACAAGA AATAAAGAAGCCACCTTACGGTGGCCAAAACAGAAAATACATAAAGGAGTCGATAACTACTCCA AGGATACTACCACAGCCTAACCTCCAAGAAGAAAATATTTTTATATTAAAGAAACAACTTAGAA CAGTGAACTCAAAATAACGAGAACAAATCAATAAATACATGCCTGTAACAAATACTACTATTTA TTTAAACTAAATTTACAGAATACAGACTGATAGCTACCCAACAGTCAAACACATTTCATTTCAG CAGCGCAAAGTTCATAAGTAGAGACTAAATATCGAATTATTGAAAGGTAAATATAGATGACTAA CCAGTTTACCATATGATAGCCAACACCTCCATGTACAATCGTTTGCAAGGTGGACTTTAGATTC CCGGCAACATTATTTTCAGTCTGTGAAGTGAATTCAACCTTGTTTTCACCAGTCCCGGATGTTA CTTTGCCATTATCAGCAATATTTTTAGCTGAATATGTCGGTTCTTGACTTGTAGACCGATGATC ACTAAACTTTGAGTTATCATCAGTGCTAGGCATCTCCATGCCATTAACAGAAGAATAAGTGGAT GAAAGTGAAAGAACGATTGCTTGAAACTCTTCAGGAACATCCACAGCAACCCACGTCTCTTGAT CTAGAACTGCCTTGATTTTTGTCAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.055216128

Conservation Information
Conserved circRNAs	NA
PMCS	0.055216128

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							108749372-108746788(-)
						
						Potential amino acid sequence
						
							MTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSA
KNIADNGKVTSGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVD
ISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLI
PDIRRVLFLKIPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWN
GPEDNDVQPSQFAKAVTKMTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDD
NSKFSDHRSTSQEPTYSAKNIADNGKVTSGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGY
HMVNCGLILLKMLSEYVDISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSIT
SKHLALASQIISFMHSLIPDIRRVLFLKIPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMR
ERLLANLRKLPQIVEGWNGPEDNDVQPSQFAKAVTKMTKIKAVLDQETWVAVDVPEEFQAIVLS
LSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKNIADNGKVTSGTGENKVEFTSQTENNV
AGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSLEVVQRVVEILKLFNTRTC
QLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPDIRRVLFLKIPEARKHLLMSELDRVAQ
DYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPSQFAKAVTKMTKIKAVLDQ
ETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKNIADNGKVT
SGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSL
EVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPDIRRVLFLK
IPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPS
QFAKAVTK(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	108749372-108746788(-)
Potential amino acid sequence	MTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSA KNIADNGKVTSGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVD ISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLI PDIRRVLFLKIPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWN GPEDNDVQPSQFAKAVTKMTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDD NSKFSDHRSTSQEPTYSAKNIADNGKVTSGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGY HMVNCGLILLKMLSEYVDISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSIT SKHLALASQIISFMHSLIPDIRRVLFLKIPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMR ERLLANLRKLPQIVEGWNGPEDNDVQPSQFAKAVTKMTKIKAVLDQETWVAVDVPEEFQAIVLS LSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKNIADNGKVTSGTGENKVEFTSQTENNV AGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSLEVVQRVVEILKLFNTRTC QLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPDIRRVLFLKIPEARKHLLMSELDRVAQ DYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPSQFAKAVTKMTKIKAVLDQ ETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHRSTSQEPTYSAKNIADNGKVT SGTGENKVEFTSQTENNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSL EVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFMHSLIPDIRRVLFLK IPEARKHLLMSELDRVAQDYKIHRDEIHNKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPS QFAKAVTK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d004396_circ_g.5

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