Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | 2_circ_ag.6 |
ID in PlantcircBase | ath_circ_012832 |
Alias | 2:1799694-1823811 |
Organism | Arabidpsis thaliana |
Position | chr2: 1799694-1823811 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | 2_circ_ag.3 AT2G05070_circ_g.1 AT2G05070_circ_g.2 2_circ_ag.3 AT2G05070_circ_g.4 AT2G05070_circ_g.5 2_circ_ag.7 2_circ_ag.8 2_circ_ag.9 2_circ_ag.10 |
Support reads | 2 |
Tissues | seedling |
Exon boundary | NA-NA |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.458198465 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Philips et al., 2020 |