Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA016143_circ_ag.1 |
ID in PlantcircBase | osi_circ_014245 |
Alias | Chr04:15557512_15566032(MH63RS2), Chr04:16122047_16130653(ZS97RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr4: 13214767-13223373 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ag-circRNA |
Identification method | CIRI2, CIRI2, CIRCexplorer2 |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | BGIOSGA016142_circ_ag.1 BGIOSGA016142_circ_ag.2 BGIOSGA016142_circ_ag.3 BGIOSGA016143_circ_ag.2 BGIOSGA016143_circ_g.1 BGIOSGA016143_circ_ag.2 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | NA-NA |
Splicing signals | GT-CA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osa_circ_023440 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |