Release 6

In the sixth version, one new species (Populus trichocarpa) have been added to PlantcircBase, and novel circRNAs have been added to five species (Arabidopsis thaliana, Echinochloa crus-galli, Gossypium hirsutum, Glycine max and Solanum lycopersicum). Totally, 20 organisms were collected and the number of circRNA entries has been increased to 142,115. In this version, we collected plant circRNAs from eight publications (details here) that were published in 2020. Ten literatures (details here) about plant circRNAs were also published, but these were not collected by PlantcircBase becauce of: (a) circRNA information were not provided by authors; (b) the genome of the organism was not well assembled; and so on.

Table 6.1 Summary of circRNA entries in PlantcircBase (Release 6)

Organisms Total circRNAs
Oryza sativa40,311
Arabidopsis thaliana52,393 ADDED!
Zea mays6,434
Solanum lycopersicum3,727 ADDED!
Triticum aestivum162
Glycine max8,148 ADDED!
Gossypium hirsutum3,944 ADDED!
Hordeum vulgare39
Poncirus trifoliata556
Solanum tuberosum1,728
Gossypium arboreum1,041
Gossypium raimondii1,478
Camellia sinensis3,174
Pyrus betulifolia258
Oryza sativa ssp. indica1,743
Nicotiana benthamiana8,559
Brassica rapa591
Cucumis sativus4,832
Echinochloa crus-galli825 ADDED!
Populus trichocarpa NEW!2,172

Detailed statistic data could be found here.