Plant Circular RNA Database

Detail information of AT1G45160_circ_g.3

			
						 General Information
					
						CircRNA Name
						AT1G45160_circ_g.3
					
						ID in PlantcircBase
						ath_circ_006073
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr1: 17086185-17089609  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder
					
						Parent gene
						
							AT1G45160						
					
						Parent gene annotation
						
							Protein kinase superfamily protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT1G45160_circ_g.2 AT1G45160_circ_g.4 AT1G45160_circ_g.5 AT1G45160_circ_g.6 AT1G45160_circ_g.7 						
					
						Support reads
						6
					
						Tissues
						whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT1G45160.1:7
AT1G45160.2:7

General Information
CircRNA Name	AT1G45160_circ_g.3
ID in PlantcircBase	ath_circ_006073
Alias	NA
Organism	Arabidpsis thaliana
Position	chr1: 17086185-17089609 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder
Parent gene	AT1G45160
Parent gene annotation	Protein kinase superfamily protein
Parent gene strand	-
Alternative splicing	AT1G45160_circ_g.2 AT1G45160_circ_g.4 AT1G45160_circ_g.5 AT1G45160_circ_g.6 AT1G45160_circ_g.7
Support reads	6
Tissues	whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT1G45160.1:7 AT1G45160.2:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCTTTATACCCATTGACTTTGAACAGGGAGGGTTAGTTTCAGATATCTTAATCATCTTCTCTTC
GTCTTTACCAGAGTTCTTGCCTCTTAACTTGATCTCcttgatgtgcccattataggcgattaac
aggttatcaggctttagatcacggtggacaatcttcagagaatggaggtactccaatgcaagaa
cctgaaat

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTGATGTGCCCATTATAGGCGATTAACAGGTTATCAGGCTTTAGATCACGGTGGACAATCTTC
AGAGAATGGAGGTACTCCAATGCAAGAACCTGAAATAAATGAGAACTCTTTCTTAAGGAATCCA
AACAAACTTTGGTACAGTATGGATATAAAGCCTTCAACTTACCAGTTCCGCGATGTATATACGA
GCAATTTCTTCGTCAAGACAGCCAACTTTCTGGAGCAGAGAGTATAGATCACCACCATTAAGAT
ATTCCATTACCAAGTAGAGATTATCTCTGCAGGTGAATGAGTAAAAAAATCGAACCTGCATTAA
TAACATCAGGTGTTCAGCCTTTGAAAGAATATTATAGTTGGACAGTAGCAAAGAAGTAAAACAT
TTACCAAAAAGGGGTATCTGACAGTTATTAGTATATTTCGCTCTTGTAGTATCCTCTCGATATC
ATTTTTCCTTATCATATCCAACTTTTTGAGTACCTGCATATGAGCTAAACAAGATTAGCACATG
GACAAGCTGACTCTGAATAGTACAACGAATAACAATGCAGCAATTGATACAACATAGGGATTTA
GGATACTAGCCTGATTCACTTATATTAGCTTTTCAAGTAGAATTTTCATAACTAAGAATTCCAT
CTTAAGAGTTTTTCATTATGAGAGGTTTGAACAATATGGCAAAAACGACTAGGCTGTCTAAAAT
TGGACAAAAGAATCTACTACTATTTAACTATATTTAAATTTATATTCTTGTCACTAAAATATAT
GGTTCAAAGCCCTGCGCATATCTATCTGCAACAAAGCGAAATAAACACCAATCTATCTGCATCA
AAGAAAGAAAAAACAAAATGCATCTACCTTTATTGCAAAAAAGTCTCCAGTTGTTCTTTTGCGT
GCAAGAAAGACTTTACCAAAGGCACCTCTACTTATTGGTTTGATGATCTCAAAGTCATCGATGC
TTATCCTATCTTTCAGCAGTAACTGTGGAGTAGCCGATGCATGCTCCAAGACATCTTCACTCTC
TTTAATGTTACCCACCGAACTTTTATCGGCAGTCAATTCACGAGCATGTAAATATTTCTCGCTG
TAGGTAATATCAGAGTTAGTAAAACTTATAGGACGAGTGCAGTAGTTAGTATACTATTGCACAG
TGAATTTACCAGAGAAGTTTCTCGATCCGCCCCCCGAAAGTATCTATTACAAGTGCTTTGAGCT
TGCCCTGCTTCAAGACAGCTTGTATGTCTTGCATGCATGCCATTATATAGTCACAGGACCCCTC
TTTCGAGAAATCTGTGCTTGCTCCACAGCGGGCAATATCAGAAAGGTCCATCATCTGCAAGATG
AAGAAAACGAAGAAAAAACACTGGAAGATATTATGCTTCGAAATGTTTATTTATTCAAAGATCA
GTGAAACAGGTAAGAAAATGATATCTATATGATCTGGAGAATAGAGACCCGCCATGGACAAGTA
ACAAAGTAATGAATAAGAAGAAGTTGAAGCTAGGAACTCGCTATAACCTAGAGAGGTTATAACA
AGAGGAGAAATTCTCAACCCATCAATGGCATCAGTAATACTCGCAAAAGTTTGAGCATCCAAAG
TTTTATTGATTAAGACATTAAGGATTCTAAGATTCCAGCAACAACCAATCTATATATCAAAAAC
TCAGCATGATATGACCTAATTCAATGTATAAGAATGGATACTGCAAGGCACAGTAGTAAACTAG
TAAAGCAACATATAACGCTGAACCAATACTTAATCTACCTAAAAAGAGAATATAATGGAAACAG
AAAACTAACCAGTCGAAGATCCTCTTGCTCTGGACAATGCCGTTCTAGCCAATAGGAGTCAAAG
TGACTTGTTCTGGGGGTATTTGTTGAAGATACTGACGTGATGCTACCTGTTGATGATGAAGTGG
CATGATGGCAAAATTTGGCCCCTACATGGCTCTTAAGGTGAATAGGATATGTGTAAGACTCGTC
TATGAAGGCAGTGTCCATCTCGTGCAGATCCTCAAACATTCCCTCTAAACCTTTATTCCGCCAT
TCGTTTATCTTGGGAGAACAACCTTCAGATGCAACTCCAGATTTCCGCAGAACAGAGTTTTCCA
AGCCACCAGCTTGAGTGAAGGAATTTAAACTTCGTGAATCAATTATCTGTTCCAGTATCTCCTC
CAGTTTCAAAAGGCGCTCATCAACATCCACACAATTTATTTCACATTTATCTGCGTATGCACAT
ATGTAAGAGTGCGGTTCCAGATGGAAGAGAGGAACTTCCTCCTCACATATCCTGCAGATTACAT
AATCAGATCCGCCTAACTCTTTTCCAGGCTCATTTGACATCTTATCTTCATACTCATCGCTCAA
ATAAAATCTTTGTTCTACCACTTTACTATCAAATTGAGGTTCATGCGATGGAAATTCTTGTTTA
GCAGCTGCATAACCTTCTCTAGCAGCATTATTGCCATGATCATTTGGTACCACATAATCAAGTG
CTGTCTCTGACTCCAAAGATTCTTTGTCTCGTCTTTTGAATTTCTGCCCAGCTTCATTTCTTTG
ATATTCAGGATAACCAGAACCAGAATCATCAACTCTAGGAGTAGAACCCCAATCTGTTTCCAAA
GCAGGGATGCGTTCTAAACATTCCTTAAATTTGCGAAAGGAGCTCTCATCAATTGGCTCAGTCT
CCTTCTGAAACATCACAACTCTTGTACAATGAGTCAATATAAAAAGCAACTGAGAGAACAACCA
CTTCACAAGTCCTGCTTGGCACTGTTTCCTTTTCCTAGTTAAGTCTTGGACAATAGATTCACAA
GTAGCACGAAGTTGAGCAGATGTCATCTCCATACAGGCTCGAGCCACATCAAGTAACTGCTCTG
CCATTTCTCGATCTTCAGGACATGATGGATCCATTTTCTCCATAGCCTCTTTGACATCTCTGAC
AAAGACATCCAGCTTCTTATCCACAGTCTCTTTAGCAACATCAAATCTTGAGTGAAGTGAGCCC
AGAAGTTCCTGAAAATCATTGCAATTCAAAAAATAGAACCAAATAACATAATTAGACCCCAACA
AAATGAGTCACTGGACTAGCTATATCATATATGGCATAGAGAGTTTAATTGAATTCCTTCAATT
TTAGAAAACAGAACTCAACCCTGAGAAGTTTCATCAATTTGTATAGCAATATCTTCCGACAATT
TTCAAACTCAATTAAAGAAAATTCTAAAACTTAAGATTGTTGTAGTACCTTCAGATCGTTATAG
CTGTGCGGACGAGGGTAGGGAGTTTGAACACCACCCCTTGGTCCTAATTCATGGGAAAAGCTCT
TTATACCCATTGACTTTGAACAGGGAGGGTTAGTTTCAGATATCTTAATCATCTTCTCTTCGTC
TTTACCAGAGTTCTTGCCTCTTAACTTGATCTC
						
					

			
		

Sequences
Splice junction sequence	TCTTTATACCCATTGACTTTGAACAGGGAGGGTTAGTTTCAGATATCTTAATCATCTTCTCTTC GTCTTTACCAGAGTTCTTGCCTCTTAACTTGATCTCcttgatgtgcccattataggcgattaac aggttatcaggctttagatcacggtggacaatcttcagagaatggaggtactccaatgcaagaa cctgaaat
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTGATGTGCCCATTATAGGCGATTAACAGGTTATCAGGCTTTAGATCACGGTGGACAATCTTC AGAGAATGGAGGTACTCCAATGCAAGAACCTGAAATAAATGAGAACTCTTTCTTAAGGAATCCA AACAAACTTTGGTACAGTATGGATATAAAGCCTTCAACTTACCAGTTCCGCGATGTATATACGA GCAATTTCTTCGTCAAGACAGCCAACTTTCTGGAGCAGAGAGTATAGATCACCACCATTAAGAT ATTCCATTACCAAGTAGAGATTATCTCTGCAGGTGAATGAGTAAAAAAATCGAACCTGCATTAA TAACATCAGGTGTTCAGCCTTTGAAAGAATATTATAGTTGGACAGTAGCAAAGAAGTAAAACAT TTACCAAAAAGGGGTATCTGACAGTTATTAGTATATTTCGCTCTTGTAGTATCCTCTCGATATC ATTTTTCCTTATCATATCCAACTTTTTGAGTACCTGCATATGAGCTAAACAAGATTAGCACATG GACAAGCTGACTCTGAATAGTACAACGAATAACAATGCAGCAATTGATACAACATAGGGATTTA GGATACTAGCCTGATTCACTTATATTAGCTTTTCAAGTAGAATTTTCATAACTAAGAATTCCAT CTTAAGAGTTTTTCATTATGAGAGGTTTGAACAATATGGCAAAAACGACTAGGCTGTCTAAAAT TGGACAAAAGAATCTACTACTATTTAACTATATTTAAATTTATATTCTTGTCACTAAAATATAT GGTTCAAAGCCCTGCGCATATCTATCTGCAACAAAGCGAAATAAACACCAATCTATCTGCATCA AAGAAAGAAAAAACAAAATGCATCTACCTTTATTGCAAAAAAGTCTCCAGTTGTTCTTTTGCGT GCAAGAAAGACTTTACCAAAGGCACCTCTACTTATTGGTTTGATGATCTCAAAGTCATCGATGC TTATCCTATCTTTCAGCAGTAACTGTGGAGTAGCCGATGCATGCTCCAAGACATCTTCACTCTC TTTAATGTTACCCACCGAACTTTTATCGGCAGTCAATTCACGAGCATGTAAATATTTCTCGCTG TAGGTAATATCAGAGTTAGTAAAACTTATAGGACGAGTGCAGTAGTTAGTATACTATTGCACAG TGAATTTACCAGAGAAGTTTCTCGATCCGCCCCCCGAAAGTATCTATTACAAGTGCTTTGAGCT TGCCCTGCTTCAAGACAGCTTGTATGTCTTGCATGCATGCCATTATATAGTCACAGGACCCCTC TTTCGAGAAATCTGTGCTTGCTCCACAGCGGGCAATATCAGAAAGGTCCATCATCTGCAAGATG AAGAAAACGAAGAAAAAACACTGGAAGATATTATGCTTCGAAATGTTTATTTATTCAAAGATCA GTGAAACAGGTAAGAAAATGATATCTATATGATCTGGAGAATAGAGACCCGCCATGGACAAGTA ACAAAGTAATGAATAAGAAGAAGTTGAAGCTAGGAACTCGCTATAACCTAGAGAGGTTATAACA AGAGGAGAAATTCTCAACCCATCAATGGCATCAGTAATACTCGCAAAAGTTTGAGCATCCAAAG TTTTATTGATTAAGACATTAAGGATTCTAAGATTCCAGCAACAACCAATCTATATATCAAAAAC TCAGCATGATATGACCTAATTCAATGTATAAGAATGGATACTGCAAGGCACAGTAGTAAACTAG TAAAGCAACATATAACGCTGAACCAATACTTAATCTACCTAAAAAGAGAATATAATGGAAACAG AAAACTAACCAGTCGAAGATCCTCTTGCTCTGGACAATGCCGTTCTAGCCAATAGGAGTCAAAG TGACTTGTTCTGGGGGTATTTGTTGAAGATACTGACGTGATGCTACCTGTTGATGATGAAGTGG CATGATGGCAAAATTTGGCCCCTACATGGCTCTTAAGGTGAATAGGATATGTGTAAGACTCGTC TATGAAGGCAGTGTCCATCTCGTGCAGATCCTCAAACATTCCCTCTAAACCTTTATTCCGCCAT TCGTTTATCTTGGGAGAACAACCTTCAGATGCAACTCCAGATTTCCGCAGAACAGAGTTTTCCA AGCCACCAGCTTGAGTGAAGGAATTTAAACTTCGTGAATCAATTATCTGTTCCAGTATCTCCTC CAGTTTCAAAAGGCGCTCATCAACATCCACACAATTTATTTCACATTTATCTGCGTATGCACAT ATGTAAGAGTGCGGTTCCAGATGGAAGAGAGGAACTTCCTCCTCACATATCCTGCAGATTACAT AATCAGATCCGCCTAACTCTTTTCCAGGCTCATTTGACATCTTATCTTCATACTCATCGCTCAA ATAAAATCTTTGTTCTACCACTTTACTATCAAATTGAGGTTCATGCGATGGAAATTCTTGTTTA GCAGCTGCATAACCTTCTCTAGCAGCATTATTGCCATGATCATTTGGTACCACATAATCAAGTG CTGTCTCTGACTCCAAAGATTCTTTGTCTCGTCTTTTGAATTTCTGCCCAGCTTCATTTCTTTG ATATTCAGGATAACCAGAACCAGAATCATCAACTCTAGGAGTAGAACCCCAATCTGTTTCCAAA GCAGGGATGCGTTCTAAACATTCCTTAAATTTGCGAAAGGAGCTCTCATCAATTGGCTCAGTCT CCTTCTGAAACATCACAACTCTTGTACAATGAGTCAATATAAAAAGCAACTGAGAGAACAACCA CTTCACAAGTCCTGCTTGGCACTGTTTCCTTTTCCTAGTTAAGTCTTGGACAATAGATTCACAA GTAGCACGAAGTTGAGCAGATGTCATCTCCATACAGGCTCGAGCCACATCAAGTAACTGCTCTG CCATTTCTCGATCTTCAGGACATGATGGATCCATTTTCTCCATAGCCTCTTTGACATCTCTGAC AAAGACATCCAGCTTCTTATCCACAGTCTCTTTAGCAACATCAAATCTTGAGTGAAGTGAGCCC AGAAGTTCCTGAAAATCATTGCAATTCAAAAAATAGAACCAAATAACATAATTAGACCCCAACA AAATGAGTCACTGGACTAGCTATATCATATATGGCATAGAGAGTTTAATTGAATTCCTTCAATT TTAGAAAACAGAACTCAACCCTGAGAAGTTTCATCAATTTGTATAGCAATATCTTCCGACAATT TTCAAACTCAATTAAAGAAAATTCTAAAACTTAAGATTGTTGTAGTACCTTCAGATCGTTATAG CTGTGCGGACGAGGGTAGGGAGTTTGAACACCACCCCTTGGTCCTAATTCATGGGAAAAGCTCT TTATACCCATTGACTTTGAACAGGGAGGGTTAGTTTCAGATATCTTAATCATCTTCTCTTCGTC TTTACCAGAGTTCTTGCCTCTTAACTTGATCTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.123880504

Conservation Information
Conserved circRNAs	NA
PMCS	0.123880504

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							17089565-17086187(-)
						
					

						Potential amino acid sequence
						
							MIKISETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRFDVAKETVDKK
LDVFVRDVKEAMEKMDPSCPEDREMAEQLLDVARACMEMTSAQLRATCESIVQDLTRKRKQCQA
GLVKWLFSQLLFILTHCTRVVMFQKETEPIDESSFRKFKECLERIPALETDWGSTPRVDDSGSG
YPEYQRNEAGQKFKRRDKESLESETALDYVVPNDHGNNAAREGYAAAKQEFPSHEPQFDSKVVE
QRFYLSDEYEDKMSNEPGKELGGSDYVICRICEEEVPLFHLEPHSYICAYADKCEINCVDVDER
LLKLEEILEQIIDSRSLNSFTQAGGLENSVLRKSGVASEGCSPKINEWRNKGLEGMFEDLHEMD
TAFIDESYTYPIHLKSHVGAKFCHHATSSSTGSITSVSSTNTPRTSHFDSYWLERHCPEQEDLR
LMMDLSDIARCGASTDFSKEGSCDYIMACMQDIQAVLKQGKLKALVIDTFGGRIEKLLCEKYLH
ARELTADKSSVGNIKESEDVLEHASATPQLLLKDRISIDDFEIIKPISRGAFGKVFLARKRTTG
DFFAIKVLKKLDMIRKNDIERILQERNILITVRYPFLVRFFYSFTCRDNLYLVMEYLNGGDLYS
LLQKVGCLDEEIARIYIAELVLALEYLHSLKIVHRDLKPDNLLIAYNGHIKEIKLRGKNSGKDE
EKMIKISETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRFDVAKETVD
KKLDVFVRDVKEAMEKMDPSCPEDREMAEQLLDVARACMEMTSAQLRATCESIVQDLTRKRKQC
QAGLVKWLFSQLLFILTHCTRVVMFQKETEPIDESSFRKFKECLERIPALETDWGSTPRVDDSG
SGYPEYQRNEAGQKFKRRDKESLESETALDYVVPNDHGNNAAREGYAAAKQEFPSHEPQFDSKV
VEQRFYLSDEYEDKMSNEPGKELGGSDYVICRICEEEVPLFHLEPHSYICAYADKCEINCVDVD
ERLLKLEEILEQIIDSRSLNSFTQAGGLENSVLRKSGVASEGCSPKINEWRNKGLEGMFEDLHE
MDTAFIDESYTYPIHLKSHVGAKFCHHATSSSTGSITSVSSTNTPRTSHFDSYWLERHCPEQED
LRLMMDLSDIARCGASTDFSKEGSCDYIMACMQDIQAVLKQGKLKALVIDTFGGRIEKLLCEKY
LHARELTADKSSVGNIKESEDVLEHASATPQLLLKDRISIDDFEIIKPISRGAFGKVFLARKRT
TGDFFAIKVLKKLDMIRKNDIERILQERNILITVRYPFLVRFFYSFTCRDNLYLVMEYLNGGDL
YSLLQKVGCLDEEIARIYIAELVLALEYLHSLKIVHRDLKPDNLLIAYNGHIKEIKLRGKNSGK
DEEKMIKISETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRFDVAKET
VDKKLDVFVRDVKEAMEKMDPSCPEDREMAEQLLDVARACMEMTSAQLRATCESIVQDLTRKRK
QCQAGLVKWLFSQLLFILTHCTRVVMFQKETEPIDESSFRKFKECLERIPALETDWGSTPRVDD
SGSGYPEYQRNEAGQKFKRRDKESLESETALDYVVPNDHGNNAAREGYAAAKQEFPSHEPQFDS
KVVEQRFYLSDEYEDKMSNEPGKELGGSDYVICRICEEEVPLFHLEPHSYICAYADKCEINCVD
VDERLLKLEEILEQIIDSRSLNSFTQAGGLENSVLRKSGVASEGCSPKINEWRNKGLEGMFEDL
HEMDTAFIDESYTYPIHLKSHVGAKFCHHATSSSTGSITSVSSTNTPRTSHFDSYWLERHCPEQ
EDLRLMMDLSDIARCGASTDFSKEGSCDYIMACMQDIQAVLKQGKLKALVIDTFGGRIEKLLCE
KYLHARELTADKSSVGNIKESEDVLEHASATPQLLLKDRISIDDFEIIKPISRGAFGKVFLARK
RTTGDFFAIKVLKKLDMIRKNDIERILQERNILITVRYPFLVRFFYSFTCRDNLYLVMEYLNGG
DLYSLLQKVGCLDEEIARIYIAELVLALEYLHSLKIVHRDLKPDNLLIAYNGHIKEIKLRGKNS
GKDEEKMIKISETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRFDVAK
ETVDKKLDVFVRDVKEAMEKMDPSCPEDREMAEQLLDVARACMEMTSAQLRATCESIVQDLTRK
RKQCQAGLVKWLFSQLLFILTHCTRVVMFQKETEPIDESSFRKFKECLERIPALETDWGSTPRV
DDSGSGYPEYQRNEAGQKFKRRDKESLESETALDYVVPNDHGNNAAREGYAAAKQEFPSHEPQF
DSKVVEQRFYLSDEYEDKMSNEPGKELGGSDYVICRICEEEVPLFHLEPHSYICAYADKCEINC
VDVDERLLKLEEILEQIIDSRSLNSFTQAGGLENSVLRKSGVASEGCSPKINEWRNKGLEGMFE
DLHEMDTAFIDESYTYPIHLKSHVGAKFCHHATSSSTGSITSVSSTNTPRTSHFDSYWLERHCP
EQEDLRLMMDLSDIARCGASTDFSKEGSCDYIMACMQDIQAVLKQGKLKALVIDTFGGRIEKLL
CEKYLHARELTADKSSVGNIKESEDVLEHASATPQLLLKDRISIDDFEIIKPISRGAFGKVFLA
RKRTTGDFFAIKVLKKLDMIRKNDIERILQERNILITVRYPFLVRFFYSFTCRDNLYLVMEYLN
GGDLYSLLQKVGCLDEEIARIYIAELVLALEYLHSLKIVHRDLKPDNLLIAYNGHIK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	17089565-17086187(-)
Potential amino acid sequence	MIKISETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRFDVAKETVDKK LDVFVRDVKEAMEKMDPSCPEDREMAEQLLDVARACMEMTSAQLRATCESIVQDLTRKRKQCQA GLVKWLFSQLLFILTHCTRVVMFQKETEPIDESSFRKFKECLERIPALETDWGSTPRVDDSGSG YPEYQRNEAGQKFKRRDKESLESETALDYVVPNDHGNNAAREGYAAAKQEFPSHEPQFDSKVVE QRFYLSDEYEDKMSNEPGKELGGSDYVICRICEEEVPLFHLEPHSYICAYADKCEINCVDVDER LLKLEEILEQIIDSRSLNSFTQAGGLENSVLRKSGVASEGCSPKINEWRNKGLEGMFEDLHEMD TAFIDESYTYPIHLKSHVGAKFCHHATSSSTGSITSVSSTNTPRTSHFDSYWLERHCPEQEDLR LMMDLSDIARCGASTDFSKEGSCDYIMACMQDIQAVLKQGKLKALVIDTFGGRIEKLLCEKYLH ARELTADKSSVGNIKESEDVLEHASATPQLLLKDRISIDDFEIIKPISRGAFGKVFLARKRTTG DFFAIKVLKKLDMIRKNDIERILQERNILITVRYPFLVRFFYSFTCRDNLYLVMEYLNGGDLYS LLQKVGCLDEEIARIYIAELVLALEYLHSLKIVHRDLKPDNLLIAYNGHIKEIKLRGKNSGKDE EKMIKISETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRFDVAKETVD KKLDVFVRDVKEAMEKMDPSCPEDREMAEQLLDVARACMEMTSAQLRATCESIVQDLTRKRKQC QAGLVKWLFSQLLFILTHCTRVVMFQKETEPIDESSFRKFKECLERIPALETDWGSTPRVDDSG SGYPEYQRNEAGQKFKRRDKESLESETALDYVVPNDHGNNAAREGYAAAKQEFPSHEPQFDSKV VEQRFYLSDEYEDKMSNEPGKELGGSDYVICRICEEEVPLFHLEPHSYICAYADKCEINCVDVD ERLLKLEEILEQIIDSRSLNSFTQAGGLENSVLRKSGVASEGCSPKINEWRNKGLEGMFEDLHE MDTAFIDESYTYPIHLKSHVGAKFCHHATSSSTGSITSVSSTNTPRTSHFDSYWLERHCPEQED LRLMMDLSDIARCGASTDFSKEGSCDYIMACMQDIQAVLKQGKLKALVIDTFGGRIEKLLCEKY LHARELTADKSSVGNIKESEDVLEHASATPQLLLKDRISIDDFEIIKPISRGAFGKVFLARKRT TGDFFAIKVLKKLDMIRKNDIERILQERNILITVRYPFLVRFFYSFTCRDNLYLVMEYLNGGDL YSLLQKVGCLDEEIARIYIAELVLALEYLHSLKIVHRDLKPDNLLIAYNGHIKEIKLRGKNSGK DEEKMIKISETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRFDVAKET VDKKLDVFVRDVKEAMEKMDPSCPEDREMAEQLLDVARACMEMTSAQLRATCESIVQDLTRKRK QCQAGLVKWLFSQLLFILTHCTRVVMFQKETEPIDESSFRKFKECLERIPALETDWGSTPRVDD SGSGYPEYQRNEAGQKFKRRDKESLESETALDYVVPNDHGNNAAREGYAAAKQEFPSHEPQFDS KVVEQRFYLSDEYEDKMSNEPGKELGGSDYVICRICEEEVPLFHLEPHSYICAYADKCEINCVD VDERLLKLEEILEQIIDSRSLNSFTQAGGLENSVLRKSGVASEGCSPKINEWRNKGLEGMFEDL HEMDTAFIDESYTYPIHLKSHVGAKFCHHATSSSTGSITSVSSTNTPRTSHFDSYWLERHCPEQ EDLRLMMDLSDIARCGASTDFSKEGSCDYIMACMQDIQAVLKQGKLKALVIDTFGGRIEKLLCE KYLHARELTADKSSVGNIKESEDVLEHASATPQLLLKDRISIDDFEIIKPISRGAFGKVFLARK RTTGDFFAIKVLKKLDMIRKNDIERILQERNILITVRYPFLVRFFYSFTCRDNLYLVMEYLNGG DLYSLLQKVGCLDEEIARIYIAELVLALEYLHSLKIVHRDLKPDNLLIAYNGHIKEIKLRGKNS GKDEEKMIKISETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRFDVAK ETVDKKLDVFVRDVKEAMEKMDPSCPEDREMAEQLLDVARACMEMTSAQLRATCESIVQDLTRK RKQCQAGLVKWLFSQLLFILTHCTRVVMFQKETEPIDESSFRKFKECLERIPALETDWGSTPRV DDSGSGYPEYQRNEAGQKFKRRDKESLESETALDYVVPNDHGNNAAREGYAAAKQEFPSHEPQF DSKVVEQRFYLSDEYEDKMSNEPGKELGGSDYVICRICEEEVPLFHLEPHSYICAYADKCEINC VDVDERLLKLEEILEQIIDSRSLNSFTQAGGLENSVLRKSGVASEGCSPKINEWRNKGLEGMFE DLHEMDTAFIDESYTYPIHLKSHVGAKFCHHATSSSTGSITSVSSTNTPRTSHFDSYWLERHCP EQEDLRLMMDLSDIARCGASTDFSKEGSCDYIMACMQDIQAVLKQGKLKALVIDTFGGRIEKLL CEKYLHARELTADKSSVGNIKESEDVLEHASATPQLLLKDRISIDDFEIIKPISRGAFGKVFLA RKRTTGDFFAIKVLKKLDMIRKNDIERILQERNILITVRYPFLVRFFYSFTCRDNLYLVMEYLN GGDLYSLLQKVGCLDEEIARIYIAELVLALEYLHSLKIVHRDLKPDNLLIAYNGHIK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT1G45160_circ_g.3

Address

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