CircRNA Name |
AT5G02380_circ_g.1 |
ID in PlantcircBase |
ath_circ_035989 |
Alias |
Ath_circ_FC3110 |
Organism |
Arabidpsis thaliana |
Position |
chr5: 506601-506764 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
ue-circRNA
|
Identification method |
CIRI-full, SMALT, Segemehl, circRNA_finder, find_circ |
Parent gene |
AT5G02380 |
Parent gene annotation |
Metallothionein-like protein 2B |
Parent gene strand |
- |
Alternative splicing |
NA |
Support reads |
2/4 |
Tissues |
siliques and seeds/root, whole_plant |
Exon boundary |
No-No
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT5G02380.1:1
|