Splice junction sequence |
AGAATCTAACCTGCGATAAGAATTCCATTTTCCGGGTTTCTTTTAGAGATAGACCTTTTTGACC TTCAGGCCTACTTTTCAGGATCATTTCTTGTTCAGCtgatatttgaggaggaaatgatgaagaa aaattgaaatctcgagcttagccagatcatttcccgggcatagatggcttccagcaccaaaagg aaggaacg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 401 Transcript exons: 1487812-1487936,1488019-1488125,1488220-1488298,1488390- 1488479 TGATATTTGAGGAGGAAATGATGAAGAAAAATTGAAATCTCGAGCTTAGCCAGATCATTTCCCG GGCATAGATGGCTTCCAGCACCAAAAGGAAGGAACGCACCAGCTTTTGGTACGAAACCATTATC CCATCTAGCAGGATCAAATTTTCTTGGATCTGGAAAGACTTCAGGGTCGATGTGGACATCCCTA AACCATGTCAAAACCTTCCAACCTTTTGGGATCAAATAGCCATTCATTTCAACGTCAGTCTTTG CCTCTCGAAAAGCAGTGAGTGAGAATGTTATGACTCGAAGTGTCTCATCGACAACCTGCGATAA GAATTCCATTTTCCGGGTTTCTTTTAGAGATAGACCTTTTTGACCTTCAGGCCTACTTTTCAGG ATCATTTCTTGTTCAGC
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Genomic sequence |
TGATATTTGAGGAGGAAATGATGAAGAAAAATTGAAATCTCGAGCTTAGCCAGATCATTTCCCG GGCATAGATGGCTTCCAGCACCAAAAGGAAGGAACGCACCAGCTTTTGGTACGAAACCATTCTG AAAATTTTCTCCAAACATTCAAAATGAATTCAGATTTCTATGGTTCGAACAATGTAAGATGATA TAACACTTAACTTACATCCCATCTAGCAGGATCAAATTTTCTTGGATCTGGAAAGACTTCAGGG TCGATGTGGACATCCCTAAACCATGTCAAAACCTTCCAACCTTTTGGGATCAAATAGCCTGCAA GATTTATCAAATCATGCTAAATATTTAGGTGCACTTTAAGAAGGTGTTTTGTATTTCATATAAG TCATGTGTTTACATGTATACTAACCATTCATTTCAACGTCAGTCTTTGCCTCTCGAAAAGCAGT GAGTGAGAATGTTATGACTCGAAGTGTCTCATCGACAACCTAGTGAAGAAACACCTCTTTCAAA ATCACCAAAAACAAATCGCATACAAAATCTCTGTTGCGCTATACTCATAGGTGACCAGAATCTA ACCTGCGATAAGAATTCCATTTTCCGGGTTTCTTTTAGAGATAGACCTTTTTGACCTTCAGGCC TACTTTTCAGGATCATTTCTTGTTCAGC |