Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G80830_circ_g.2 |
ID in PlantcircBase | ath_circ_011367 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 30373640-30373876 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | circRNA_finder |
Parent gene | AT1G80830 |
Parent gene annotation |
Metal transporter Nramp1 |
Parent gene strand | - |
Alternative splicing | AT1G80830_circ_g.1 AT1G80830_circ_g.3 AT1G80830_circ_g.4 AT1G80830_circ_g.5 AT1G80830_circ_g.6 |
Support reads | 5 |
Tissues | root, whole_plant |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | AT1G80830.2:1 AT1G80830.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.165612201 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |