Splice junction sequence |
GTAGGGGACTATTTGTTGGAAATCTCATATCTCCACGAAAACTTGTCTACATTAGCAGATGCAA ACTCTTTGAAGTGAAACCTCAAAGCCAACCAAGCAGcttcatactgaacaactcgtgaaggaat tccacaggagttgttgtcaccatcctcccatctcatgctgatttttatttgataccatctaaaa gaattaaa
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 426 Transcript exons: 3260509-3260594,3260694-3261033 CTTCATACTGAACAACTCGTGAAGGAATTCCACAGGAGTTGTTGTCACCATCCTCCCATCTCAT GCTGATTTTTATTTGATACCATCCTTGCTGGAAAAGATCAAGGTTATGAAACCTATGGATATAG ATAGCAATCTCCTGAACAGTGTCGATCATTAGCACTGGCTTAACCCTGGCTACGTAAGGCTCAG CATCAATCGACTTTGTTTGCCTACTTCTTTGGCTCAGTCCAATTAACCATCCAAGACGGCGTAA CATATGGAGAACTCACATCACCTTCTAAAACTTTGGATGTTTGTTTTCAGGACAATGATATCCT GAACCAGTAGGGGACTATTTGTTGGAAATCTCATATCTCCACGAAAACTTGTCTACATTAGCAG ATGCAAACTCTTTGAAGTGAAACCTCAAAGCCAACCAAGCAG
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Genomic sequence |
CTTCATACTGAACAACTCGTGAAGGAATTCCACAGGAGTTGTTGTCACCATCCTCCCATCTCAT GCTGATTTTTATTTGATACCATCTAAAAGAATTAAAAGATACAACAAGTAACAACTCTTTAGAA CAAGAAGAGAACATTGCTTCAATTCACTCAGAACTAGATATAGAGAAACTATCATACCCTTGCT GGAAAAGATCAAGGTTATGAAACCTATGGATATAGATAGCAATCTCCTGAACAGTGTCGATCAT TAGCACTGGCTTAACCCTGGCTACGTAAGGCTCAGCATCAATCGACTTTGTTTGCCTACTTCTT TGGCTCAGTCCAATTAACCATCCAAGACGGCGTAACATATGGAGAACTCACATCACCTTCTAAA ACTTTGGATGTTTGTTTTCAGGACAATGATATCCTGAACCAGTAGGGGACTATTTGTTGGAAAT CTCATATCTCCACGAAAACTTGTCTACATTAGCAGATGCAAACTCTTTGAAGTGAAACCTCAAA GCCAACCAAGCAG |