Plant Circular RNA Database

Detail information of AT2G39480_circ_g.2

			
						 General Information
					
						CircRNA Name
						AT2G39480_circ_g.2
					
						ID in PlantcircBase
						ath_circ_017410
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr2: 16479757-16483721  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						PcircRNA_finder
					
						Parent gene
						
							AT2G39480						
					
						Parent gene annotation
						
							ABC transporter B family member 6
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT2G39480_circ_g.3 						
					
						Support reads
						1
					
						Tissues
						inflorescences
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT2G39480.2:9
AT2G39480.1:9

General Information
CircRNA Name	AT2G39480_circ_g.2
ID in PlantcircBase	ath_circ_017410
Alias	NA
Organism	Arabidpsis thaliana
Position	chr2: 16479757-16483721 JBrowse»
Reference genome	TAIR10.38
Type	ue-circRNA
Identification method	PcircRNA_finder
Parent gene	AT2G39480
Parent gene annotation	ABC transporter B family member 6
Parent gene strand	-
Alternative splicing	AT2G39480_circ_g.3
Support reads	1
Tissues	inflorescences
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT2G39480.2:9 AT2G39480.1:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACTAGATTATAATATATGTAAGGATTTTAGCAAAGGTGAACTTACCAATCCAACCAGATATGAA
AACACCTCCAGCGATATATACAATGGTCAGCGAAAGctgggcaatggcagaaagagtaagtact
ggcaaagtcgctaatgcaacaagggccaaacgccaaccgagcagcagcccaataagaatggcaa
cgataaca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGGGCAATGGCAGAAAGAGTAAGTACTGGCAAAGTCGCTAATGCAACAAGGGCCAAACGCCAA
CCGAGCAGCAGCCCAATAAGAATGGCAACGATAACAGCAAAACTATCCTGAATAAATATGGAAA
GCCTGTTGCTGAAGGCAGCTCGGACAAAAGTGGCATCATTTGCTAGGCGCATGGATAATGTATC
TGGACTGTTCTCTTCTTCGTCATACCATCCAACTTCATTACGCAGCATTGCTATCACATCAGAT
AAAGTCAATAAGTTAAGTGAAAGTAGTAAACATGTAGTGAAGTGAGTTAACAGTGAGTTAACAA
TGAAGAAAAATATGGCAGTACCTGAGAACATCATTCGCCGCACTCTCTCAGTCATTTTCTCCCC
CATAATACCAAAGTAGAAGTGCTGTAAGAAATTGGCAACAACTGTCACTATTCCCATGCAGGCA
ATGATCAAACACCACTTGTCAACCTCTTCACGCAGGTGGCTTCCCTTGCTCGTATAGTATGTCG
TCACTACTAATGCAATAACATAAGCTAGAAGAGGATTGAAAGAACCAAAGATTGCAGCACCAAT
ACTCCCTAATACAGCGTATAGCCACTCTGGAAAACTAAGCTGTGCCAACCTCCAAAATGAAGGT
GGCTCCTTGTGTTGACCGTCCTTGGCCACCTTAACACTTGCTGAAGTGTCATCTGAGTGACCAA
GAGGGCGGCTAAAAGTCTGTGAATGAGAGCGCTCATTTTGGGGATCTGATATCAAAAGGGGTGA
TATAGGGGACTCCGGATCTGAACCATTTGATTTCTGACGTTGTGGACACTGAATGTCAATTTTT
GGTAATTCTGGTAACCGCATCTCGAAACTATCTTGTCTTTTGATGGTGGGTTCCTTCTCACCAA
CATCCAACGACGAGCCATTTTCTCCCAGTTTCTCTGGTGCAGGGCTATGATCATTGGGCGATTC
TTCACTATTAAAGCACAATTCCTGGGAGCGGAAAACATTATGACCTCTCTGAAGAGATGGAGAC
TTAGCCATTTTGGGCGATGATGGTTCTTGGAAGCCACGACCAGCTGAAGAATCCCTCTCAGCCT
GAAACGCAGCAGAATCGTTGTAGTTCCTAACTGGCATCCTGCAAGGCAACACGAGTTCCATAAA
CAAGTAGAATCATCAAAGTCCACCCTTCCATAGATCATTAAATCAAAAGCAGCCAAACAAAATT
CTCAACCACATGGACTTTACTACACAACAGACTTTACAAGTTGTTAGATATGTATATGGTCTTG
GCTGGAAAATCATACCGTCTGGGTAGCTTTGTTGCTTCTTCACACTTCAGAAGCTCAGCATACA
AATTACCAAGGTTGATTAGTTCATCATGCGTACCCATTTCAAGTAGCTGGCCCTCCTCCATTAC
AGCAATATAGTCAGCATTTCTTATCAGACTTAGTCGTCGGGCTATTATTATGGTAGACCTTCCT
AACATTAGAAGATCAAGGGCTTCTTGGACAACTCTTTCAGCTTCAAAGTCTAGTCCTCCAGTGA
CCTCGTCAAGCAAAAGAATTGTTGGATCTAAGAGTACGGCTCTAGCAATCGATAGCTTTATTTT
CTGCTCCTCTGTCAACGTTAAACCAGTCTTTCCAACCTAGAGGACAAACAAGTCATTTTCAACT
TCTAAAAATGAGAATAGCAACAAAAACACAATTCATAACTACAAACTTTTCAGTGGATAGTTAC
CTGAGTTTCATATCCTTTTTCAAGTGAGCTGATAAATGTGTGTGCATGTGCTTTTTTAGCTGCT
TCCTCTATCTGATCCAGAGTAGCATCTCGGCCGTATGCAATATTCTCTCTTATGCTCAGACTAA
GCAAAGCAGGCTCCTGTGTCACCAGGCCTATTTGGCTTCTCAGCCACTCTAATTTTAGATTTTT
AATATTTTCTCCATCAAGTAGAACTTCTCCTGTATAAGAGAAAACCACAGATCTAATCAGTTAC
TAATAGTATCCTTCGCAGGTGAGTATCCAAAGGGGATTATTCAGAAAAACTGATACATCTTAAA
TTACACATCATAGTACCTAGTGTAGGATCATAAAACCGTTCCATTAGAGGAATGATACTGCTTT
TTCCAGAACCATTTCTACCAACAAGTGCAACAGCTTTTTTAGCCGGCACAGTAAGGTAAAATCC
ACTCAAGATTGGAATTTCAGGTCGTGACAAATAGCTGAAATATACATTCCGAAACTCAATATTT
CCTTGGACAGCAGACAAAATAATTCCCTCTTGATTAGTCCCAGAGGATGAACGACTTATCATCT
CAAAAAGCCTATACGCCGCAATTCTTCCTTGATCAAATGAATAAAAGTTTGTAGCCGCTTGATT
TAAACCCCTGCACAGCACAATATGAATTCAATTAGCAAACAGACACTGGAGAAAAAAAACAAAA
AAGAAGAAGATAAGAGAGTAAAGTAGAATCGGAAGCTTACAGCCCACTTAAAATAACAGCAAAA
AGGGCTGTTATGATCTCTCCACCATTTGCTCTATGATGAATAACAAAGAACCGACCAATCCAAA
GTTGCATAGCACATGAACATATAGCAAGCCCATAAGTAAATCCAAGTCCAAGTCCTTGCACAAG
ACTAATCAATATACCATATCTCAGAGTTGCTTGGAGAGAAGTTGCATAAGAGTATTTTGCAAGA
GTTTCATTTGTAAAGGCATACAAAGTCCTAACATAAGAGACTGCCTGCACATATAGAATAAAAC
CTTTTGAGCGTTAGAAAATATATTCAGATGCGATCTGACACTATAAACAAACCAGAATGAAGAA
CTCAAAAAATGGACCAGTAGGGGATGCGTTTCAGAAGAACTTGAACTCATAAGACTGACGTGGG
CATGTAATTGCCATGCATCCAAGTCGATGCAATATCCAAGTTATGGATGCTAAGATTAATTATA
CATGAATCCTATTATAACAAAACCGAAGCCATGACTTGGGCAATATGTTGAGATGAATTTTAAT
TCACGATTGCAGTCGCATTAAACCAAGATAAGTAACCTAAACAGTCCGACCTGCCTATTACAAT
CTAACCCTCATAGATTCTGCCTAAAATTTTCTGAACTTAAACAAGTTTTGATTCAAATAAGAGT
ACTGTAAAAGATATCAAATTTTGCACAGCAAAAATTAACTTTGATGTTCACAAGTCAAAGAAGT
CTCTCTGTTATAACTCTACTGCTTAAACATCATTGTCATTGTCGGAAACATGTCATTTAATGCT
TGCAACAGAATTCGTCAATCAAATTGCGCGAATTTCTAATACCTGTTCAGCAATGCTGGCTGCT
TCAGCATATGCATCTTGAATATTCTCAGCAAGTCTGTGGAGAAATATATTTGATATGCCTCCAG
CAGCAACAATGAAAGGACCGGTGGCTAACGTAATGAGGGCAATTTCCCAGCAGTTGACAAAACC
AATAATAAGACCACTGATAAATGTCGCCATGTTATGAATGTAATTCCCAACCTGTAAAGTCCAA
GATCAAAAAGATTAAGGAAATCCATGAAGATGTATCATTCTTTGCAAAAATAAAGATATTCAAT
AGGAAACTTGAAACCAAATTCAAAAGTGAAACATACTTTTTCACTTAGAGCCGACTGAATAAGT
AGAACATCACTCAGTACTTGGCTTACTATATCCCCGTTATTCCCATATGTATCAAAGAAACTCA
TATCCTGATTTAGTAGCACTTGGACGTACTTTGACCTGATCACAGCAGTCTGCCTCTCTCCAGT
CAGTATCCAGCAAGACACCTCTATAAAAAAGGACAACTAATTATGGTGACGGATAATAGCATCA
TTGCATTAGAGGAAAGAAGGACACAACTAGATTATAATATATGTAAGGATTTTAGCAAAGGTGA
ACTTACCAATCCAACCAGATATGAAAACACCTCCAGCGATATATACAATGGTCAGCGAAAG
						
					

			
		

Sequences
Splice junction sequence	ACTAGATTATAATATATGTAAGGATTTTAGCAAAGGTGAACTTACCAATCCAACCAGATATGAA AACACCTCCAGCGATATATACAATGGTCAGCGAAAGctgggcaatggcagaaagagtaagtact ggcaaagtcgctaatgcaacaagggccaaacgccaaccgagcagcagcccaataagaatggcaa cgataaca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGGGCAATGGCAGAAAGAGTAAGTACTGGCAAAGTCGCTAATGCAACAAGGGCCAAACGCCAA CCGAGCAGCAGCCCAATAAGAATGGCAACGATAACAGCAAAACTATCCTGAATAAATATGGAAA GCCTGTTGCTGAAGGCAGCTCGGACAAAAGTGGCATCATTTGCTAGGCGCATGGATAATGTATC TGGACTGTTCTCTTCTTCGTCATACCATCCAACTTCATTACGCAGCATTGCTATCACATCAGAT AAAGTCAATAAGTTAAGTGAAAGTAGTAAACATGTAGTGAAGTGAGTTAACAGTGAGTTAACAA TGAAGAAAAATATGGCAGTACCTGAGAACATCATTCGCCGCACTCTCTCAGTCATTTTCTCCCC CATAATACCAAAGTAGAAGTGCTGTAAGAAATTGGCAACAACTGTCACTATTCCCATGCAGGCA ATGATCAAACACCACTTGTCAACCTCTTCACGCAGGTGGCTTCCCTTGCTCGTATAGTATGTCG TCACTACTAATGCAATAACATAAGCTAGAAGAGGATTGAAAGAACCAAAGATTGCAGCACCAAT ACTCCCTAATACAGCGTATAGCCACTCTGGAAAACTAAGCTGTGCCAACCTCCAAAATGAAGGT GGCTCCTTGTGTTGACCGTCCTTGGCCACCTTAACACTTGCTGAAGTGTCATCTGAGTGACCAA GAGGGCGGCTAAAAGTCTGTGAATGAGAGCGCTCATTTTGGGGATCTGATATCAAAAGGGGTGA TATAGGGGACTCCGGATCTGAACCATTTGATTTCTGACGTTGTGGACACTGAATGTCAATTTTT GGTAATTCTGGTAACCGCATCTCGAAACTATCTTGTCTTTTGATGGTGGGTTCCTTCTCACCAA CATCCAACGACGAGCCATTTTCTCCCAGTTTCTCTGGTGCAGGGCTATGATCATTGGGCGATTC TTCACTATTAAAGCACAATTCCTGGGAGCGGAAAACATTATGACCTCTCTGAAGAGATGGAGAC TTAGCCATTTTGGGCGATGATGGTTCTTGGAAGCCACGACCAGCTGAAGAATCCCTCTCAGCCT GAAACGCAGCAGAATCGTTGTAGTTCCTAACTGGCATCCTGCAAGGCAACACGAGTTCCATAAA CAAGTAGAATCATCAAAGTCCACCCTTCCATAGATCATTAAATCAAAAGCAGCCAAACAAAATT CTCAACCACATGGACTTTACTACACAACAGACTTTACAAGTTGTTAGATATGTATATGGTCTTG GCTGGAAAATCATACCGTCTGGGTAGCTTTGTTGCTTCTTCACACTTCAGAAGCTCAGCATACA AATTACCAAGGTTGATTAGTTCATCATGCGTACCCATTTCAAGTAGCTGGCCCTCCTCCATTAC AGCAATATAGTCAGCATTTCTTATCAGACTTAGTCGTCGGGCTATTATTATGGTAGACCTTCCT AACATTAGAAGATCAAGGGCTTCTTGGACAACTCTTTCAGCTTCAAAGTCTAGTCCTCCAGTGA CCTCGTCAAGCAAAAGAATTGTTGGATCTAAGAGTACGGCTCTAGCAATCGATAGCTTTATTTT CTGCTCCTCTGTCAACGTTAAACCAGTCTTTCCAACCTAGAGGACAAACAAGTCATTTTCAACT TCTAAAAATGAGAATAGCAACAAAAACACAATTCATAACTACAAACTTTTCAGTGGATAGTTAC CTGAGTTTCATATCCTTTTTCAAGTGAGCTGATAAATGTGTGTGCATGTGCTTTTTTAGCTGCT TCCTCTATCTGATCCAGAGTAGCATCTCGGCCGTATGCAATATTCTCTCTTATGCTCAGACTAA GCAAAGCAGGCTCCTGTGTCACCAGGCCTATTTGGCTTCTCAGCCACTCTAATTTTAGATTTTT AATATTTTCTCCATCAAGTAGAACTTCTCCTGTATAAGAGAAAACCACAGATCTAATCAGTTAC TAATAGTATCCTTCGCAGGTGAGTATCCAAAGGGGATTATTCAGAAAAACTGATACATCTTAAA TTACACATCATAGTACCTAGTGTAGGATCATAAAACCGTTCCATTAGAGGAATGATACTGCTTT TTCCAGAACCATTTCTACCAACAAGTGCAACAGCTTTTTTAGCCGGCACAGTAAGGTAAAATCC ACTCAAGATTGGAATTTCAGGTCGTGACAAATAGCTGAAATATACATTCCGAAACTCAATATTT CCTTGGACAGCAGACAAAATAATTCCCTCTTGATTAGTCCCAGAGGATGAACGACTTATCATCT CAAAAAGCCTATACGCCGCAATTCTTCCTTGATCAAATGAATAAAAGTTTGTAGCCGCTTGATT TAAACCCCTGCACAGCACAATATGAATTCAATTAGCAAACAGACACTGGAGAAAAAAAACAAAA AAGAAGAAGATAAGAGAGTAAAGTAGAATCGGAAGCTTACAGCCCACTTAAAATAACAGCAAAA AGGGCTGTTATGATCTCTCCACCATTTGCTCTATGATGAATAACAAAGAACCGACCAATCCAAA GTTGCATAGCACATGAACATATAGCAAGCCCATAAGTAAATCCAAGTCCAAGTCCTTGCACAAG ACTAATCAATATACCATATCTCAGAGTTGCTTGGAGAGAAGTTGCATAAGAGTATTTTGCAAGA GTTTCATTTGTAAAGGCATACAAAGTCCTAACATAAGAGACTGCCTGCACATATAGAATAAAAC CTTTTGAGCGTTAGAAAATATATTCAGATGCGATCTGACACTATAAACAAACCAGAATGAAGAA CTCAAAAAATGGACCAGTAGGGGATGCGTTTCAGAAGAACTTGAACTCATAAGACTGACGTGGG CATGTAATTGCCATGCATCCAAGTCGATGCAATATCCAAGTTATGGATGCTAAGATTAATTATA CATGAATCCTATTATAACAAAACCGAAGCCATGACTTGGGCAATATGTTGAGATGAATTTTAAT TCACGATTGCAGTCGCATTAAACCAAGATAAGTAACCTAAACAGTCCGACCTGCCTATTACAAT CTAACCCTCATAGATTCTGCCTAAAATTTTCTGAACTTAAACAAGTTTTGATTCAAATAAGAGT ACTGTAAAAGATATCAAATTTTGCACAGCAAAAATTAACTTTGATGTTCACAAGTCAAAGAAGT CTCTCTGTTATAACTCTACTGCTTAAACATCATTGTCATTGTCGGAAACATGTCATTTAATGCT TGCAACAGAATTCGTCAATCAAATTGCGCGAATTTCTAATACCTGTTCAGCAATGCTGGCTGCT TCAGCATATGCATCTTGAATATTCTCAGCAAGTCTGTGGAGAAATATATTTGATATGCCTCCAG CAGCAACAATGAAAGGACCGGTGGCTAACGTAATGAGGGCAATTTCCCAGCAGTTGACAAAACC AATAATAAGACCACTGATAAATGTCGCCATGTTATGAATGTAATTCCCAACCTGTAAAGTCCAA GATCAAAAAGATTAAGGAAATCCATGAAGATGTATCATTCTTTGCAAAAATAAAGATATTCAAT AGGAAACTTGAAACCAAATTCAAAAGTGAAACATACTTTTTCACTTAGAGCCGACTGAATAAGT AGAACATCACTCAGTACTTGGCTTACTATATCCCCGTTATTCCCATATGTATCAAAGAAACTCA TATCCTGATTTAGTAGCACTTGGACGTACTTTGACCTGATCACAGCAGTCTGCCTCTCTCCAGT CAGTATCCAGCAAGACACCTCTATAAAAAAGGACAACTAATTATGGTGACGGATAATAGCATCA TTGCATTAGAGGAAAGAAGGACACAACTAGATTATAATATATGTAAGGATTTTAGCAAAGGTGA ACTTACCAATCCAACCAGATATGAAAACACCTCCAGCGATATATACAATGGTCAGCGAAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.196978505

Conservation Information
Conserved circRNAs	NA
PMCS	0.196978505

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							16483470-16479759(-)
						
					

						Potential amino acid sequence
						
							MSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLIIGFVNCWEIALITLATG
PFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLR
YGILISLVQGLGLGFTYGLAICSCAMQLWIGRFFVIHHRANGGEIITALFAVILSGLGLNQAAT
NFYSFDQGRIAAYRLFEMISRSSSGTNQEGIILSAVQGNIEFRNVYFSYLSRPEIPILSGFYLT
VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALL
SLSIRENIAYGRDATLDQIEEAAKKAHAHTFISSLEKGYETQVGKTGLTLTEEQKIKLSIARAV
LLDPTILLLDEVTGGLDFEAERVVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLLEM
GTHDELINLGNLYAELLKCEEATKLPRRMPVRNYNDSAAFQAERDSSAGRGFQEPSSPKMAKSP
SLQRGHNVFRSQELCFNSEESPNDHSPAPEKLGENGSSLDVGEKEPTIKRQDSFEMRLPELPKI
DIQCPQRQKSNGSDPESPISPLLISDPQNERSHSQTFSRPLGHSDDTSASVKVAKDGQHKEPPS
FWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLLAYVIALVVTTYYTSKGSHLREEVDKWCLIIAC
MGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWYDEEENSPDTLSMRLANDATFV
RAAFSNRLSIFIQDSFAVIVAILIGLLLGWRLALVALATLPVLTLSAIAQLSLTIVYIAGGVFI
SGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKV
GNYIHNMATFISGLIIGFVNCWEIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIA
EQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAMQLWIGR
FFVIHHRANGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSGTNQEGII
LSAVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL
GEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKKAHAHTFI
SSLEKGYETQVGKTGLTLTEEQKIKLSIARAVLLDPTILLLDEVTGGLDFEAERVVQEALDLLM
LGRSTIIIARRLSLIRNADYIAVMEEGQLLEMGTHDELINLGNLYAELLKCEEATKLPRRMPVR
NYNDSAAFQAERDSSAGRGFQEPSSPKMAKSPSLQRGHNVFRSQELCFNSEESPNDHSPAPEKL
GENGSSLDVGEKEPTIKRQDSFEMRLPELPKIDIQCPQRQKSNGSDPESPISPLLISDPQNERS
HSQTFSRPLGHSDDTSASVKVAKDGQHKEPPSFWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLL
AYVIALVVTTYYTSKGSHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMF
SAMLRNEVGWYDEEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVAILIGLLLGWRL
ALVALATLPVLTLSAIAQLSLTIVYIAGGVFISGWIEVSCWILTGERQTAVIRSKYVQVLLNQD
MSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLIIGFVNCWEIALITLATG
PFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLR
YGILISLVQGLGLGFTYGLAICSCAMQLWIGRFFVIHHRANGGEIITALFAVILSGLGLNQAAT
NFYSFDQGRIAAYRLFEMISRSSSGTNQEGIILSAVQGNIEFRNVYFSYLSRPEIPILSGFYLT
VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALL
SLSIRENIAYGRDATLDQIEEAAKKAHAHTFISSLEKGYETQVGKTGLTLTEEQKIKLSIARAV
LLDPTILLLDEVTGGLDFEAERVVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLLEM
GTHDELINLGNLYAELLKCEEATKLPRRMPVRNYNDSAAFQAERDSSAGRGFQEPSSPKMAKSP
SLQRGHNVFRSQELCFNSEESPNDHSPAPEKLGENGSSLDVGEKEPTIKRQDSFEMRLPELPKI
DIQCPQRQKSNGSDPESPISPLLISDPQNERSHSQTFSRPLGHSDDTSASVKVAKDGQHKEPPS
FWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLLAYVIALVVTTYYTSKGSHLREEVDKWCLIIAC
MGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWYDEEENSPDTLSMRLANDATFV
RAAFSNRLSIFIQDSFAVIVAILIGLLLGWRLALVALATLPVLTLSAIAQLSLTIVYIAGGVFI
SGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKV
GNYIHNMATFISGLIIGFVNCWEIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIA
EQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAMQLWIGR
FFVIHHRANGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSGTNQEGII
LSAVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL
GEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKKAHAHTFI
SSLEKGYETQVGKTGLTLTEEQKIKLSIARAVLLDPTILLLDEVTGGLDFEAERVVQEALDLLM
LGRSTIIIARRLSLIRNADYIAVMEEGQLLEMGTHDELINLGNLYAELLKCEEATKLPRRMPVR
NYNDSAAFQAERDSSAGRGFQEPSSPKMAKSPSLQRGHNVFRSQELCFNSEESPNDHSPAPEKL
GENGSSLDVGEKEPTIKRQDSFEMRLPELPKIDIQCPQRQKSNGSDPESPISPLLISDPQNERS
HSQTFSRPLGHSDDTSASVKVAKDGQHKEPPSFWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLL
AYVIALVVTTYYTSKGSHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMF
SAMLRNEVGWYDEEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVAILIGLLLGWRL
ALVALATLPVLTLSAIAQ(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	16483470-16479759(-)
Potential amino acid sequence	MSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLIIGFVNCWEIALITLATG PFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLR YGILISLVQGLGLGFTYGLAICSCAMQLWIGRFFVIHHRANGGEIITALFAVILSGLGLNQAAT NFYSFDQGRIAAYRLFEMISRSSSGTNQEGIILSAVQGNIEFRNVYFSYLSRPEIPILSGFYLT VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALL SLSIRENIAYGRDATLDQIEEAAKKAHAHTFISSLEKGYETQVGKTGLTLTEEQKIKLSIARAV LLDPTILLLDEVTGGLDFEAERVVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLLEM GTHDELINLGNLYAELLKCEEATKLPRRMPVRNYNDSAAFQAERDSSAGRGFQEPSSPKMAKSP SLQRGHNVFRSQELCFNSEESPNDHSPAPEKLGENGSSLDVGEKEPTIKRQDSFEMRLPELPKI DIQCPQRQKSNGSDPESPISPLLISDPQNERSHSQTFSRPLGHSDDTSASVKVAKDGQHKEPPS FWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLLAYVIALVVTTYYTSKGSHLREEVDKWCLIIAC MGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWYDEEENSPDTLSMRLANDATFV RAAFSNRLSIFIQDSFAVIVAILIGLLLGWRLALVALATLPVLTLSAIAQLSLTIVYIAGGVFI SGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKV GNYIHNMATFISGLIIGFVNCWEIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIA EQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAMQLWIGR FFVIHHRANGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSGTNQEGII LSAVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL GEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKKAHAHTFI SSLEKGYETQVGKTGLTLTEEQKIKLSIARAVLLDPTILLLDEVTGGLDFEAERVVQEALDLLM LGRSTIIIARRLSLIRNADYIAVMEEGQLLEMGTHDELINLGNLYAELLKCEEATKLPRRMPVR NYNDSAAFQAERDSSAGRGFQEPSSPKMAKSPSLQRGHNVFRSQELCFNSEESPNDHSPAPEKL GENGSSLDVGEKEPTIKRQDSFEMRLPELPKIDIQCPQRQKSNGSDPESPISPLLISDPQNERS HSQTFSRPLGHSDDTSASVKVAKDGQHKEPPSFWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLL AYVIALVVTTYYTSKGSHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMF SAMLRNEVGWYDEEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVAILIGLLLGWRL ALVALATLPVLTLSAIAQLSLTIVYIAGGVFISGWIEVSCWILTGERQTAVIRSKYVQVLLNQD MSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLIIGFVNCWEIALITLATG PFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLR YGILISLVQGLGLGFTYGLAICSCAMQLWIGRFFVIHHRANGGEIITALFAVILSGLGLNQAAT NFYSFDQGRIAAYRLFEMISRSSSGTNQEGIILSAVQGNIEFRNVYFSYLSRPEIPILSGFYLT VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALL SLSIRENIAYGRDATLDQIEEAAKKAHAHTFISSLEKGYETQVGKTGLTLTEEQKIKLSIARAV LLDPTILLLDEVTGGLDFEAERVVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLLEM GTHDELINLGNLYAELLKCEEATKLPRRMPVRNYNDSAAFQAERDSSAGRGFQEPSSPKMAKSP SLQRGHNVFRSQELCFNSEESPNDHSPAPEKLGENGSSLDVGEKEPTIKRQDSFEMRLPELPKI DIQCPQRQKSNGSDPESPISPLLISDPQNERSHSQTFSRPLGHSDDTSASVKVAKDGQHKEPPS FWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLLAYVIALVVTTYYTSKGSHLREEVDKWCLIIAC MGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWYDEEENSPDTLSMRLANDATFV RAAFSNRLSIFIQDSFAVIVAILIGLLLGWRLALVALATLPVLTLSAIAQLSLTIVYIAGGVFI SGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKV GNYIHNMATFISGLIIGFVNCWEIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIA EQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAMQLWIGR FFVIHHRANGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSGTNQEGII LSAVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL GEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKKAHAHTFI SSLEKGYETQVGKTGLTLTEEQKIKLSIARAVLLDPTILLLDEVTGGLDFEAERVVQEALDLLM LGRSTIIIARRLSLIRNADYIAVMEEGQLLEMGTHDELINLGNLYAELLKCEEATKLPRRMPVR NYNDSAAFQAERDSSAGRGFQEPSSPKMAKSPSLQRGHNVFRSQELCFNSEESPNDHSPAPEKL GENGSSLDVGEKEPTIKRQDSFEMRLPELPKIDIQCPQRQKSNGSDPESPISPLLISDPQNERS HSQTFSRPLGHSDDTSASVKVAKDGQHKEPPSFWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLL AYVIALVVTTYYTSKGSHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMF SAMLRNEVGWYDEEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVAILIGLLLGWRL ALVALATLPVLTLSAIAQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT2G39480_circ_g.2

Address

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