Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d035487_circ_g.2 |
ID in PlantcircBase | zma_circ_002209 |
Alias | circ1032 |
Organism | Zea mays |
Position | chr6: 28977266-28983041 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d035487 |
Parent gene annotation |
E3 SUMO-protein ligase SIZ1 |
Parent gene strand | - |
Alternative splicing | Zm00001d035487_circ_g.1 Zm00001d035487_circ_g.3 Zm00001d035487_circ_g.4 |
Support reads | 61 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d035487_T007:8 Zm00001d035487_T027:9 Zm00001d035487_T015:8 Zm00001d035487_T036:8 Zm00001d035487_T052:8 Zm00001d035487_T047:8 Zm00001d035487_T066:8 Zm00001d035487_T025:9 Zm00001d035487_T050:8 Zm00001d035487_T023:8 Zm00001d035487_T037:8 Zm00001d035487_T044:8 Zm00001d035487_T057:8 Zm00001d035487_T034:8 Zm00001d035487_T030:8 Zm00001d035487_T031:8 Zm00001d035487_T049:8 Zm00001d035487_T021:8 Zm00001d035487_T058:8 Zm00001d035487_T029:8 Zm00001d035487_T003:8 Zm00001d035487_T009:8 Zm00001d035487_T060:8 Zm00001d035487_T020:8 Zm00001d035487_T042:8 Zm00001d035487_T024:9 Zm00001d035487_T053:8 Zm00001d035487_T075:8 Zm00001d035487_T016:8 Zm00001d035487_T002:8 Zm00001d035487_T032:8 Zm00001d035487_T004:8 Zm00001d035487_T006:8 Zm00001d035487_T028:8 Zm00001d035487_T026:9 Zm00001d035487_T040:8 Zm00001d035487_T008:8 Zm00001d035487_T046:8 Zm00001d035487_T061:8 Zm00001d035487_T033:8 Zm00001d035487_T043:8 Zm00001d035487_T035:8 Zm00001d035487_T019:8 Zm00001d035487_T064:8 Zm00001d035487_T059:8 Zm00001d035487_T068:8 Zm00001d035487_T056:8 Zm00001d035487_T041:8 Zm00001d035487_T022:8 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.02988271 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |