Plant Circular RNA Database

Detail information of Os04g0212200_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os04g0212200_circ_g.6
					
						ID in PlantcircBase
						osa_circ_023093
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 7510114-7512829  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os04g0212200						
					
						Parent gene annotation
						
							Similar to protein binding protein. (Os04t0212200-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os04g0212200_circ_g.3 Os04g0212200_circ_g.4 Os04g0212200_circ_g.5 Os04g0212200_circ_g.7 Os04g0212200_circ_g.8 Os04g0212200_circ_g.9 Os04g0212200_circ_g.10 Os04g0212200_circ_g.11 Os04g0212200_circ_g.12 Os04g0212200_circ_g.13 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0212200-01:5

General Information
CircRNA Name	Os04g0212200_circ_g.6
ID in PlantcircBase	osa_circ_023093
Alias	NA
Organism	Oryza sativa
Position	chr4: 7510114-7512829 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	CIRCexplorer
Parent gene	Os04g0212200
Parent gene annotation	Similar to protein binding protein. (Os04t0212200-01)
Parent gene strand	+
Alternative splicing	Os04g0212200_circ_g.3 Os04g0212200_circ_g.4 Os04g0212200_circ_g.5 Os04g0212200_circ_g.7 Os04g0212200_circ_g.8 Os04g0212200_circ_g.9 Os04g0212200_circ_g.10 Os04g0212200_circ_g.11 Os04g0212200_circ_g.12 Os04g0212200_circ_g.13
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0212200-01:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCCATCATTATCTTTTGAGGTGGTCCAACGTGTTGTTGAAATATTGAAGCTCTTCAACACTAGG
ACGTGCCAACTGGTTCTTGGTGCAGGTGCCATGCAGgtacatctagtgcaagcagctgaagtta
aaagaatagttgaatggatcatgggaaacctcgaggggagcttaagttctgatgcttcaaattc
tgtacaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 981
Transcript exons: 7510114-7510367,7511050-7511221,7511323-7511406,7512128-
7512444,7512676-7512829
GTACATCTAGTGCAAGCAGCTGAAGTTAAAAGAATAGTTGAATGGATCATGGGAAACCTCGAGG
GGAGCTTAAGTTCTGATGCTTCAAATTCTGTACAAAAGCACAGTGGCTCGGTTTCTGATTTTTC
CCAAGAAAATGACCACGGTGTCACTTCACGGGTGTCTAATACTCTTACCAGGAGTAATTCTAAG
TTTCCCTTCTTTCAAGGAAAAACGAATGACATGTCCAGTACAAATTCAATAAAGAATGTCCGAG
CTGATGTCTTGAGAGAAAACACAGAAGCTGTTTTTGCTGCATGTGATGCTGCCCATGGACGATG
GGCTAAACTTCTTGGTGTTCGTGCTGCCCTTCACCCCAAATTAAGACTTCAGGAGTTCTTGATC
ATCTATAATGTAACAGAAGAATTTGTAGCTGCCACTGAAAAGATTGGAGGCAGGTTGGGTTACA
ACATCCGTGGAATTGTACAACAACAATCAAAGCAATTTGTTGACTATCAGCATACTGTCCGGAT
GGCAAAAATCAAGGCAGTTCTTGACCAAGAGACATGGGTTGCTATTGATGTTCCAGAAGAGTTC
CAAGCAATTGTTCTATCACTATCATCCACTTATTCCGTTGCTAATGGCATGGAGATGCCTAGCA
CTGATGACAGCTCAAAGCTCCATGAAAATCGGGTTACAAGTCAAGAACCAGTAAATTCAGCTGA
AAATAATACTGATAATGGCAACGCAGTATCTACTTCTCCTTCGACTGAAAACAATGTTGGGCAT
GCTAGATCAACACAGCAAACCATTGTGCATGGGGGTGTAGGCTATCATATGGTAAACTGTGGTT
TGATATTGTTGAAGATGTTATCGGAATATGTTGACATCAGTAAATGCTTGCCATCATTATCTTT
TGAGGTGGTCCAACGTGTTGTTGAAATATTGAAGCTCTTCAACACTAGGACGTGCCAACTGGTT
CTTGGTGCAGGTGCCATGCAG
						
					

						Genomic sequence
						
							GTACATCTAGTGCAAGCAGCTGAAGTTAAAAGAATAGTTGAATGGATCATGGGAAACCTCGAGG
GGAGCTTAAGTTCTGATGCTTCAAATTCTGTACAAAAGCACAGTGGCTCGGTTTCTGATTTTTC
CCAAGAAAATGACCACGGTGTCACTTCACGGGTGTCTAATACTCTTACCAGGAGTAATTCTAAG
TTTCCCTTCTTTCAAGGAAAAACGAATGACATGTCCAGTACAAATTCAATAAAGAATGTCCGGT
AAGTTAAGGTGCAACTAGTTATTAAATCTTGCATTCACATGGGCTAGATATCATATACATCCGC
ATCAAAACTCTATGGAAAAACATATTTGAACTTTTTTTTAGGTTTGGAATAAAAATATTTTTAT
GAATAGATCCAAAATTAAAAATTAGGAGCTACAAAAGTTATATATAGAATCCATCCGAATATAG
TTTTTGTTACTTTCTGTTTTTCTGGTTATTCTGAAATTTGAAATTAATAATTACAAAATCGTAC
CTGACATGGACTTTTGTTGTAATCTGAACCACTGTAATTTCGTCCCACCTTGAAGAATGGCTAG
ATTTTATTTTTCACCTTTTTCTGATAAATGCGAAAAATACCTCAGTTTGCCTAAAAGAACCTCC
CTTTGTCCCAAAATATAGCTAGTTCTAAAGTTTTTCACTTCTATATTTTGGGACACCCTTTTGT
ACTCTAGAAGTAGCTATAGTTTGGGACAAAAAATTGAATGCTAGAAGTAGCTATATTTTGGGAT
GGAGGGAGTAGATATGCTTTTTATGTTATGTTAGCTGATGTCATGGTAGTGCTGTGGACAGATT
CAATACAAAATTAGAATATTGGGTCAAATTCTAGGCTTTACCTCTTTTATATCATAATTATATT
TGACAACACAATTGCTCTCTAATATTTGCCTTTGGTACAGAGCTGATGTCTTGAGAGAAAACAC
AGAAGCTGTTTTTGCTGCATGTGATGCTGCCCATGGACGATGGGCTAAACTTCTTGGTGTTCGT
GCTGCCCTTCACCCCAAATTAAGACTTCAGGAGTTCTTGATCATCTATAATGTAACAGAAGAAT
TTGTAGCTGCCACTGAAAAGGTTATTTCTTTTCCTGTTTGAAAAATATGCACAAACGCTCATTA
TGCTCATCACTGCATACATGCAAGTTATGACTTTATTGTATCTTCTTATTCCTGTAGATTGGAG
GCAGGTTGGGTTACAACATCCGTGGAATTGTACAACAACAATCAAAGCAATTTGTTGACTATCA
GCATACTGTCCGGGTGAGTGATAAAATTTGTTGACTATCAGCATTTGTTGAATTCTACAATGGT
AAACAACTTGCATGAGTTTACTGATGATGAAAAATTAAAAGGCCATTCTTCAAATGTCATCTAT
AAGGAGAGAATAATATTAAATATAAGACTACAAAGCATCATTGTACACAAACTTCAATGGATAA
TTGTGCTATTTTGAAAGAATATAAATCACTCAACTTTATCCCTGACCCCTCAGTTATAGATATC
CATCAAATTGAATATAATGCTGTACCTTTATTATGCTTTTTAATTGGAGAATATTACTTGCGGA
AAGTGCATTTCACCATCAAATACCCTGAGTAAAATGGTAGTGCAAACGGAGAATGTAAGGCTTA
AACAAGTACTTCCTCCGGTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGAAAA
ATATGAATGTGGGAATTTCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGG
AGGGAGTACTACTCAACAATTGACACTATAGTTTGTGAAACAATTAACATTATTAGGTGTCACT
GCTGCTTTTTTTTGCTACTCAACAATCATCATAAATACAAATTTCAAGGTTGTGCAAACAACTG
TGATTTGGATTTCAGACTGATATGTACTTTGTCTGCAGTTGATGCACAACTTATAGTATTTTTG
TGCACTAAAACTTCTAATATTCTTTTGAAGATGGCAAAAATCAAGGCAGTTCTTGACCAAGAGA
CATGGGTTGCTATTGATGTTCCAGAAGAGTTCCAAGCAATTGTTCTATCACTATCATCCACTTA
TTCCGTTGCTAATGGCATGGAGATGCCTAGCACTGATGACAGCTCAAAGCTCCATGAAAATCGG
GTTACAAGTCAAGAACCAGTAAATTCAGCTGAAAATAATACTGATAATGGCAACGCAGTATCTA
CTTCTCCTTCGACTGAAAACAATGTTGGGCATGCTAGATCAACACAGCAAACCATTGTGCATGG
GGGTGTAGGCTATCATATGGTAAACTGGTTAGTCATCTATATTTTCTACTTAATAGTTCAGGTC
AAGTTGCATTCTCTTCTTGCGCACCTTGCAGTGTTGCAACGTGACACTTTTATTTCCCAACATT
TTGATAGCTAGAGTCGTAAACCATCCCTCTATTGATTTGTGGTCAACCTTGTTTTATTTGTTGT
GTCTTTTTGTTAACTTGTGTTCTCATTACGTGAGATTCTCAATTTAAATCATGTTCACCCTTGC
AGTGGTTTGATATTGTTGAAGATGTTATCGGAATATGTTGACATCAGTAAATGCTTGCCATCAT
TATCTTTTGAGGTGGTCCAACGTGTTGTTGAAATATTGAAGCTCTTCAACACTAGGACGTGCCA
ACTGGTTCTTGGTGCAGGTGCCATGCAG
						
					

			
		

Sequences
Splice junction sequence	GCCATCATTATCTTTTGAGGTGGTCCAACGTGTTGTTGAAATATTGAAGCTCTTCAACACTAGG ACGTGCCAACTGGTTCTTGGTGCAGGTGCCATGCAGgtacatctagtgcaagcagctgaagtta aaagaatagttgaatggatcatgggaaacctcgaggggagcttaagttctgatgcttcaaattc tgtacaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 981 Transcript exons: 7510114-7510367,7511050-7511221,7511323-7511406,7512128- 7512444,7512676-7512829 GTACATCTAGTGCAAGCAGCTGAAGTTAAAAGAATAGTTGAATGGATCATGGGAAACCTCGAGG GGAGCTTAAGTTCTGATGCTTCAAATTCTGTACAAAAGCACAGTGGCTCGGTTTCTGATTTTTC CCAAGAAAATGACCACGGTGTCACTTCACGGGTGTCTAATACTCTTACCAGGAGTAATTCTAAG TTTCCCTTCTTTCAAGGAAAAACGAATGACATGTCCAGTACAAATTCAATAAAGAATGTCCGAG CTGATGTCTTGAGAGAAAACACAGAAGCTGTTTTTGCTGCATGTGATGCTGCCCATGGACGATG GGCTAAACTTCTTGGTGTTCGTGCTGCCCTTCACCCCAAATTAAGACTTCAGGAGTTCTTGATC ATCTATAATGTAACAGAAGAATTTGTAGCTGCCACTGAAAAGATTGGAGGCAGGTTGGGTTACA ACATCCGTGGAATTGTACAACAACAATCAAAGCAATTTGTTGACTATCAGCATACTGTCCGGAT GGCAAAAATCAAGGCAGTTCTTGACCAAGAGACATGGGTTGCTATTGATGTTCCAGAAGAGTTC CAAGCAATTGTTCTATCACTATCATCCACTTATTCCGTTGCTAATGGCATGGAGATGCCTAGCA CTGATGACAGCTCAAAGCTCCATGAAAATCGGGTTACAAGTCAAGAACCAGTAAATTCAGCTGA AAATAATACTGATAATGGCAACGCAGTATCTACTTCTCCTTCGACTGAAAACAATGTTGGGCAT GCTAGATCAACACAGCAAACCATTGTGCATGGGGGTGTAGGCTATCATATGGTAAACTGTGGTT TGATATTGTTGAAGATGTTATCGGAATATGTTGACATCAGTAAATGCTTGCCATCATTATCTTT TGAGGTGGTCCAACGTGTTGTTGAAATATTGAAGCTCTTCAACACTAGGACGTGCCAACTGGTT CTTGGTGCAGGTGCCATGCAG
Genomic sequence	GTACATCTAGTGCAAGCAGCTGAAGTTAAAAGAATAGTTGAATGGATCATGGGAAACCTCGAGG GGAGCTTAAGTTCTGATGCTTCAAATTCTGTACAAAAGCACAGTGGCTCGGTTTCTGATTTTTC CCAAGAAAATGACCACGGTGTCACTTCACGGGTGTCTAATACTCTTACCAGGAGTAATTCTAAG TTTCCCTTCTTTCAAGGAAAAACGAATGACATGTCCAGTACAAATTCAATAAAGAATGTCCGGT AAGTTAAGGTGCAACTAGTTATTAAATCTTGCATTCACATGGGCTAGATATCATATACATCCGC ATCAAAACTCTATGGAAAAACATATTTGAACTTTTTTTTAGGTTTGGAATAAAAATATTTTTAT GAATAGATCCAAAATTAAAAATTAGGAGCTACAAAAGTTATATATAGAATCCATCCGAATATAG TTTTTGTTACTTTCTGTTTTTCTGGTTATTCTGAAATTTGAAATTAATAATTACAAAATCGTAC CTGACATGGACTTTTGTTGTAATCTGAACCACTGTAATTTCGTCCCACCTTGAAGAATGGCTAG ATTTTATTTTTCACCTTTTTCTGATAAATGCGAAAAATACCTCAGTTTGCCTAAAAGAACCTCC CTTTGTCCCAAAATATAGCTAGTTCTAAAGTTTTTCACTTCTATATTTTGGGACACCCTTTTGT ACTCTAGAAGTAGCTATAGTTTGGGACAAAAAATTGAATGCTAGAAGTAGCTATATTTTGGGAT GGAGGGAGTAGATATGCTTTTTATGTTATGTTAGCTGATGTCATGGTAGTGCTGTGGACAGATT CAATACAAAATTAGAATATTGGGTCAAATTCTAGGCTTTACCTCTTTTATATCATAATTATATT TGACAACACAATTGCTCTCTAATATTTGCCTTTGGTACAGAGCTGATGTCTTGAGAGAAAACAC AGAAGCTGTTTTTGCTGCATGTGATGCTGCCCATGGACGATGGGCTAAACTTCTTGGTGTTCGT GCTGCCCTTCACCCCAAATTAAGACTTCAGGAGTTCTTGATCATCTATAATGTAACAGAAGAAT TTGTAGCTGCCACTGAAAAGGTTATTTCTTTTCCTGTTTGAAAAATATGCACAAACGCTCATTA TGCTCATCACTGCATACATGCAAGTTATGACTTTATTGTATCTTCTTATTCCTGTAGATTGGAG GCAGGTTGGGTTACAACATCCGTGGAATTGTACAACAACAATCAAAGCAATTTGTTGACTATCA GCATACTGTCCGGGTGAGTGATAAAATTTGTTGACTATCAGCATTTGTTGAATTCTACAATGGT AAACAACTTGCATGAGTTTACTGATGATGAAAAATTAAAAGGCCATTCTTCAAATGTCATCTAT AAGGAGAGAATAATATTAAATATAAGACTACAAAGCATCATTGTACACAAACTTCAATGGATAA TTGTGCTATTTTGAAAGAATATAAATCACTCAACTTTATCCCTGACCCCTCAGTTATAGATATC CATCAAATTGAATATAATGCTGTACCTTTATTATGCTTTTTAATTGGAGAATATTACTTGCGGA AAGTGCATTTCACCATCAAATACCCTGAGTAAAATGGTAGTGCAAACGGAGAATGTAAGGCTTA AACAAGTACTTCCTCCGGTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGAAAA ATATGAATGTGGGAATTTCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGG AGGGAGTACTACTCAACAATTGACACTATAGTTTGTGAAACAATTAACATTATTAGGTGTCACT GCTGCTTTTTTTTGCTACTCAACAATCATCATAAATACAAATTTCAAGGTTGTGCAAACAACTG TGATTTGGATTTCAGACTGATATGTACTTTGTCTGCAGTTGATGCACAACTTATAGTATTTTTG TGCACTAAAACTTCTAATATTCTTTTGAAGATGGCAAAAATCAAGGCAGTTCTTGACCAAGAGA CATGGGTTGCTATTGATGTTCCAGAAGAGTTCCAAGCAATTGTTCTATCACTATCATCCACTTA TTCCGTTGCTAATGGCATGGAGATGCCTAGCACTGATGACAGCTCAAAGCTCCATGAAAATCGG GTTACAAGTCAAGAACCAGTAAATTCAGCTGAAAATAATACTGATAATGGCAACGCAGTATCTA CTTCTCCTTCGACTGAAAACAATGTTGGGCATGCTAGATCAACACAGCAAACCATTGTGCATGG GGGTGTAGGCTATCATATGGTAAACTGGTTAGTCATCTATATTTTCTACTTAATAGTTCAGGTC AAGTTGCATTCTCTTCTTGCGCACCTTGCAGTGTTGCAACGTGACACTTTTATTTCCCAACATT TTGATAGCTAGAGTCGTAAACCATCCCTCTATTGATTTGTGGTCAACCTTGTTTTATTTGTTGT GTCTTTTTGTTAACTTGTGTTCTCATTACGTGAGATTCTCAATTTAAATCATGTTCACCCTTGC AGTGGTTTGATATTGTTGAAGATGTTATCGGAATATGTTGACATCAGTAAATGCTTGCCATCAT TATCTTTTGAGGTGGTCCAACGTGTTGTTGAAATATTGAAGCTCTTCAACACTAGGACGTGCCA ACTGGTTCTTGGTGCAGGTGCCATGCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_005317* 						
					
						PMCS
						0.230960187

Conservation Information
Conserved circRNAs	osi_circ_005317*
PMCS	0.230960187

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							7510163-7512826(+)
7510121-7512739(-)
7510165-7512432(-)
						
					

						Potential amino acid sequence
						
							MGNLEGSLSSDASNSVQKHSGSVSDFSQENDHGVTSRVSNTLTRSNSKFPFFQGKTNDMSSTNS
IKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRAALHPKLRLQEFLIIYNVTEEFVAATEKIG
GRLGYNIRGIVQQQSKQFVDYQHTVRMAKIKAVLDQETWVAIDVPEEFQAIVLSLSSTYSVANG
MEMPSTDDSSKLHENRVTSQEPVNSAENNTDNGNAVSTSPSTENNVGHARSTQQTIVHGGVGYH
MVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTRTCQLVLGAGAMQVHLVQAAEV
KRIVEWIMGNLEGSLSSDASNSVQKHSGSVSDFSQENDHGVTSRVSNTLTRSNSKFPFFQGKTN
DMSSTNSIKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRAALHPKLRLQEFLIIYNVTEEFV
AATEKIGGRLGYNIRGIVQQQSKQFVDYQHTVRMAKIKAVLDQETWVAIDVPEEFQAIVLSLSS
TYSVANGMEMPSTDDSSKLHENRVTSQEPVNSAENNTDNGNAVSTSPSTENNVGHARSTQQTIV
HGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTRTCQLVLGAGAMQVH
LVQAAEVKRIVEWIMGNLEGSLSSDASNSVQKHSGSVSDFSQENDHGVTSRVSNTLTRSNSKFP
FFQGKTNDMSSTNSIKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRAALHPKLRLQEFLIIY
NVTEEFVAATEKIGGRLGYNIRGIVQQQSKQFVDYQHTVRMAKIKAVLDQETWVAIDVPEEFQA
IVLSLSSTYSVANGMEMPSTDDSSKLHENRVTSQEPVNSAENNTDNGNAVSTSPSTENNVGHAR
STQQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTRTCQLVLG
AGAMQVHLVQAAEVKRIVEWIMGNLEGSLSSDASNSVQKHSGSVSDFSQENDHGVTSRVSNTLT
RSNSKFPFFQGKTNDMSSTNSIKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRAALHPKLRL
QEFLIIYNVTEEFVAATEKIGGRLGYNIRGIVQQQSKQFVDYQHTVRMAKIKAVLDQETWVAID
VPEEFQAIVLSLSSTYSVANGMEMPSTDDSSKLHENRVTSQEPVNSAENNTDNGNAVSTSPSTE
NNVGHARSTQQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTR
TCQLVLGAGAMQ(+)
MYLHGTCTKNQLARPSVEELQYFNNTLDHLKR*(-)
MIHSTILLTSAACTRCTCMAPAPRTSWHVLVLKSFNISTTRWTTSKDNDGKHLLMSTYSDNIFN
NIKPQFTI*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	7510163-7512826(+) 7510121-7512739(-) 7510165-7512432(-)
Potential amino acid sequence	MGNLEGSLSSDASNSVQKHSGSVSDFSQENDHGVTSRVSNTLTRSNSKFPFFQGKTNDMSSTNS IKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRAALHPKLRLQEFLIIYNVTEEFVAATEKIG GRLGYNIRGIVQQQSKQFVDYQHTVRMAKIKAVLDQETWVAIDVPEEFQAIVLSLSSTYSVANG MEMPSTDDSSKLHENRVTSQEPVNSAENNTDNGNAVSTSPSTENNVGHARSTQQTIVHGGVGYH MVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTRTCQLVLGAGAMQVHLVQAAEV KRIVEWIMGNLEGSLSSDASNSVQKHSGSVSDFSQENDHGVTSRVSNTLTRSNSKFPFFQGKTN DMSSTNSIKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRAALHPKLRLQEFLIIYNVTEEFV AATEKIGGRLGYNIRGIVQQQSKQFVDYQHTVRMAKIKAVLDQETWVAIDVPEEFQAIVLSLSS TYSVANGMEMPSTDDSSKLHENRVTSQEPVNSAENNTDNGNAVSTSPSTENNVGHARSTQQTIV HGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTRTCQLVLGAGAMQVH LVQAAEVKRIVEWIMGNLEGSLSSDASNSVQKHSGSVSDFSQENDHGVTSRVSNTLTRSNSKFP FFQGKTNDMSSTNSIKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRAALHPKLRLQEFLIIY NVTEEFVAATEKIGGRLGYNIRGIVQQQSKQFVDYQHTVRMAKIKAVLDQETWVAIDVPEEFQA IVLSLSSTYSVANGMEMPSTDDSSKLHENRVTSQEPVNSAENNTDNGNAVSTSPSTENNVGHAR STQQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTRTCQLVLG AGAMQVHLVQAAEVKRIVEWIMGNLEGSLSSDASNSVQKHSGSVSDFSQENDHGVTSRVSNTLT RSNSKFPFFQGKTNDMSSTNSIKNVRADVLRENTEAVFAACDAAHGRWAKLLGVRAALHPKLRL QEFLIIYNVTEEFVAATEKIGGRLGYNIRGIVQQQSKQFVDYQHTVRMAKIKAVLDQETWVAID VPEEFQAIVLSLSSTYSVANGMEMPSTDDSSKLHENRVTSQEPVNSAENNTDNGNAVSTSPSTE NNVGHARSTQQTIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTR TCQLVLGAGAMQ(+) MYLHGTCTKNQLARPSVEELQYFNNTLDHLKR(-) MIHSTILLTSAACTRCTCMAPAPRTSWHVLVLKSFNISTTRWTTSKDNDGKHLLMSTYSDNIFN NIKPQFTI(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os04g0212200_circ_g.6

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