Detailed infomation of each circRNA
General Information | |
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CircRNA Name | scaffold250_circ_ig.1 |
ID in PlantcircBase | ecr_circ_000397 |
Alias | NA |
Organism | Echinochloa crus-galli |
Position | chrscaffold250: 1418769-1418994 JBrowse» |
Reference genome | Echinochloa crus-galli v2 |
Type | ig-circRNA |
Identification method | circseq-cup |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf |
Exon boundary | NA-NA |
Splicing signals | TC-TG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs |
"osa_circ_032068 osa_circ_013225 osa_circ_025453 osa_circ_025454 osa_circ_013234 osa_circ_032067 osa_circ_013250 osa_circ_028445 osa_circ_013249 osa_circ_013224 osa_circ_032070 osa_circ_025434 osa_circ_032066 osa_circ_032065 osa_circ_032064 osa_circ_032063" |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | NA |