Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G06410_circ_g.1 |
ID in PlantcircBase | ath_circ_000982 |
Alias | At_ciR2401, AT1G06410_C1 |
Organism | Arabidpsis thaliana |
Position | chr1: 1957477-1957750 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, find_circ, CIRI2 |
Parent gene | AT1G06410 |
Parent gene annotation |
TPS7 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 3/1 |
Tissues | leaf/aerial |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G06410.1:1 AT1G06410.2:1 AT1G06410.3:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.350531691 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | response to drought stress |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017;Zhang et al., 2019 |