Plant Circular RNA Database

Detail information of BGIOSGA030171_circ_g.4

			
						 General Information
					
						CircRNA Name
						BGIOSGA030171_circ_g.4
					
						ID in PlantcircBase
						osi_circ_007966
					
						Alias
						9:3218262|3223193
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr9: 3218262-3223193  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA030171						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							BGIOSGA030171_circ_g.5 BGIOSGA030171_circ_g.6 BGIOSGA030171_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA030171-TA:5

General Information
CircRNA Name	BGIOSGA030171_circ_g.4
ID in PlantcircBase	osi_circ_007966
Alias	9:3218262\|3223193
Organism	Oryza sativa ssp. indica
Position	chr9: 3218262-3223193 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA030171
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	BGIOSGA030171_circ_g.5 BGIOSGA030171_circ_g.6 BGIOSGA030171_circ_g.7
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA030171-TA:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AAATTGTGATTTCTGAAGGGATATTGCTCGCAGATGTGTTACCCACATGGATTCGGCAACCAAC
CATGACAATATCAGGGTTTGGGTTTGAAATAGTCACctgctacaccgaggacactgcaatgact
caagggaagatgcttgaagattttcataaaatgaatcaagctcaatcatgaaattgcatgctgt
gattggaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGCTACACCGAGGACACTGCAATGACTCAAGGGAAGATGCTTGAAGATTTTCATAAAATGAAT
CAAGCTCAATCATGAAATTGCATGCTGTGATTGGAATGGGGAACTCAACCTTCAATTCTGTCTG
ATTAAATGTAAGATGGCAGCTTTTAGCACGCTTCCAGAGAGACCAATTATTCTTCAGTTCTGAC
AAATCTGTTACCGGCCTGTTGTTGTAATATAGGTTAAGTACTTTCACTGACTTTGACTTGCGAG
CATCATAAACATTCATTGTCACCGACTGTATAGTAAAGCTTCCAGTACATTTCACTATTATCCT
ATTGTCAGTGAATTTGGTCTCAGACTTCAAACTTTCAAGCTTCATTCTCGAATATGGAACATCT
GGGCAGCTGCAGGTAACACAAGGCTCACTTTCCAAGTAATAGCCATCAAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCATTCCAACAAGAATGTATCAACAAAACGTTTCAGGAGATCA
CCATCCTTACCAGTAAACACTACCACAGCCTGCTCCATGTCCATGCAGGATTTTTCTGAGGAGC
CTTCAGAGCTATCGTCACCTTTCTGCTTCTTTTTTGAATCTGATGACTGTGAACCAGTCCTTGT
GGAACTTCCAATATCTCCACTCTCTGTTTTCTGTGCATTATGGTTAGCATCTTTTCCTGAATAG
AATGCTAGATTTAAAAGCTTGAGAGTCTGAACGATACATTCTTCACTGAAATAGTAGAAGTTAT
CCATTAAAAAAGGAAGAAGATCTGTGTGCTTCAAGCAAAATTTTTGCCAATTTCTTGGCCTTGA
TGCAGCCACATCACAAAGAGTAGACAAACATTTTATAAGCTTAACACTTCTCTCATAGGGCACA
GGATTTCGAAAACCTCCAGACTTATTAATGATTTTATGAAGTTTCTTGACTTCATGTGAATATT
GCCATGAATCCCTGACACTGTAATAATGAGTCTTGCTGCCACACAGATGAAGAAATAGCCTCCT
TGCATACCTCCGAACAAACGTTGTATGAGCATTGCTGATATAACTACAAAGAACATCTTGGTAT
CCATCTAACTTTAGATCCTTGGTGTTGGGAACCTTGCAACTTTTATCCTTATCAGCTGATTTTT
CCTTTTCTGGTCGAACCATGCTATATACAAGCCTGAATGTATTCTCCAACAACAATTTGTAGTA
GTCCATGAAAAGATCAGTGGGATGGGACTTGGCATATGAATCTGAGAAAAAGGGAGAGAAGTTT
CCCGCTGGTAACTCTCTCCGTACTGTCAATAGGGATCCACAGCCTGAACTAGAAGAGCCACCTT
CACCATTTATGGATGATGACTTGAAAACATGAACAAGTTGTTGCAGTATATCCATCAAATAGTT
CAGAAAGGATTGCTGCCTGAGGGCAGAACAAGCACGAATTAACTGGGAAGCAAACTCATTTTTA
TCATGGTCATCATTGGAGGATTGAAGAGTCGTGGTTGATACTTGGACATGAACAGGACCTTTTT
CTGTCAAATCAGAGCTCCCACCTGACTTCGAATGAGAGCCATCAGTCCCAGGCTGATGCCAGTT
ACGGAACATAAGTGTGAAAAACATGAAAACAAGGATAGATACTTCTCCGAAAGAACAACGTGTT
TTCGCAGGAAATGGTTTACTTATATTGATTTCATCTATAAGCCACTTCACAAACTTTTCTAAAT
CCAAATTTTCAGGTTTTGTGCTATCCATGAAAGGTCCGCCAACTGCAGATGAAAGTCTGTAAAA
CAGCTGCATTATAGGTATAGCTCGAGTGCCAGCAGTGGTCTCCATCCAGCCACTAAGCTCTTCA
ATTAAACGACTAAGTAGCAAAGAGTTAATGGCCCGTTTTGATGCAGAAATTGATACTGTCCTTT
GTTCGGTCATGGAACCATGGAAATCTACAGACTCACTTGCATCCAGTACATGAATTGACGATGG
TGAGGTCTGGATAGTTCTATCAGCAGGAGCTTGAAGGACACTGGAATCTGTTAGTTCATCAACA
GATAAATGAATTTCATTTCCTTCTCCCCCAAATGTATCAAGCTCAATTGGTATTGCTGACATGG
GATGATCTCTTGAATGTGGTGCAGGTAGACGATCTGCATCAAGTATCTCATAGCATGTTTCACA
CAAGTCAAAGTCTGGACATATGTTGCAGTGCCACCTTCGCCTAAGTATTGGAACAGTGGAACAA
CCATCACAACAATATTGCACTGAGGATGTGGCAGGATCTTCTTCAATCATGACCTGAGCATTTC
CAGTGGTTGAATTTGAAGCAGCACTTGCTTTTGCATGATTGTCAGGAGCATCATCATTAGCAAT
CATTGTCTGCTTTGGGAAAGGGACTTGGAGAAATCGTGATGAAATAGCCAAACTGCAAAGGCCA
GCCAAAAAAAGAACATTGGAAAATGCATGAGTGCTTATAAGACTGAGACAATACTAGAATATGT
CAAAAATCCTGCATAGGCAATACAAAAAAGACCACCTGCTTGAAGTCTGGACTGCTTCATATGG
CGCAAATAGTAACTTCTTCAATAAAGCAACTGCAGGTGCTACTGAGACTCCAGATTTTTCATTT
GAATGTAAGGCCAAGCATTCAGCATAGCTATAAATAAATTCCACACAGGGTACAACTAGGCTAT
TTATCCTTTGCGTATCTGGCCTGTCTAAATCCAAAATACCCCAGAAAACTTGCATAAGACCATC
AACTAGTTCAGTGCCTGCATAAGGATATATTAGTGTTTAGAATTTAGCAAATATGCCAATTCTA
CCAGCCATATGTTGATACAGCAATAACATTCCTAATGATAAGAAGATTGCATTCACAATGTTGT
ATGCATATATATTGCAATTGGAGTTGCATACATAAGTTGGCAAAGTAGCACACTCAAGCAAGAT
AAACCAGCAACAGTTAATTCAGTGCTTGCACATCTTGGCAGTTACATACGATTCAAACTGCTGG
CATACTCGTGGATATTACCCAACAAGTCTACTTTTAAAAATCACTTACCCTAGCTTTCTTGTGA
CATTAAGGATAGCAACAGCTTAACCAGAACAGGAGACATACAACAGTTAACATAAAGAACACAG
AGTATTGCTAGCTTGTTGCATTGAGTGATTGAAAGATATTAATATACTCCATCAAGAATTCTCT
GTGCATGCACACAGGACACAACACATGACAATTTGCAGCATATAATCATTAATTACAGGACTAC
AGCAAATCCGTTGAGTGTATAGGTTTTTACGCGAAAGAATCAAGGGAAACTTTTCTTACTCCTA
GCTGCTTTTGGCATTGAGAGAACTTACAAAAGGACTTCTTTTGTATGATTTTTAGATGTATGAA
ATCGATCAAATCAACAAGATCTTCAAAGATTATCAATCCCATCGCTTGCTCTTCAGCTTATTAG
TCGCTGCCAAATTTTGAATTTTAAAACTTAATTTTGGAGTTGATTTTATGATTTTTTTTTCCAT
TGTAGTTTATGTGCTTATTATAATCAGCTGTAAGCGAAACGATGGGGCTGCATAACGAATGTTT
CATTTGGATTGGCAAAGATTCAGTATGACTAAATTGATTCTGCAAGACCAACATCCTATAACAC
TTATGATAAAGTTCATAGTTTCCAGTAAGAATGTCACTGTTTTTTTTTTTTGTGTCTACTCCCT
TTACATATAATTTTGGTCCATAACTTTTTGTTGTGTATTGGTAAAAGATTAACATTATCATAAC
GGAAGTAATCATGATGAATATGTCAAAATCTCTCTCTCATGGCCAACACTGATGAAATGATGAT
TGTAAATAGTAGTATATGAATGGTCAAACTTTCAAAAGATTAACTAGAATGCATAAAAAGAGTA
AGAATTTCATGATTCAGATAAAGGAAATCATGACTCTTTTCTTCAACAAATGTTGGAGTGAAAT
TAATACCGTGGGTCTCAAGAAAAGAAGCCAAGTTTGATTTCCTGTGCACAGCAACTTTTGACAC
TGTGTGGATCTGGGCTATGAATTCTTTTGTAACCCAACTGGATGCAGCACCTCCAACTCCTATT
CTTGAAGTAATTGATGGAAGTGATTTTATTACCCCTAGAAGGCGCATAGTATCCTTAACCTGGG
AAAAAGATTAGAATAGCTTAAAAGTGTGACCACGAATAAAGTGAAAACAATAGTCCCATATAAA
TATTAAGAACCATATACTTGGCATACATGATAGTATATTTCCTTCTTCGGGAACACAGCCTGAA
GGACACGGCATGCAGCAGAATGTAACAGAGGCTCCCTGTCACTCTGAAAGATTGTTTCCAGCAA
AGATCTGCATTTTAGATTGTTAAGTTCCATGTCTGCATCGATTGTGTCCGTACAGAAACCTGGT
TGGCAAAGCAGGTATATCCGTGAGAGGATCCTGAGAGCATCTGCCAGAACCTGCTCCTGGATAG
GAGCAGCTTGCATCGTTTGAGCCTTTTTTCCAGACTTTCCACTAGCAGAACTACCACCTAGGAC
ATGCGCTTCCATATCAAGTGCAGCATCCATTTTTTCTTTCCATCCAAATTCATCTTTGGCACGA
CCATACACTTCAATAGAATCTATCCGAGGAATAGATGAACCATCGAATGTCCGACCAACAACAA
TTGTGAATTCTTCGTCAGCCAGAAGTGATTCAGCAGTAGTGAACGGAATATCATACCAAGATCT
CATGCCTTCATCCAGCTTAATGACTCTATGAAAAATTGTGATTTCTGAAGGGATATTGCTCGCA
GATGTGTTACCCACATGGATTCGGCAACCAACCATGACAATATCAGGGTTTGGGTTTGAAATAG
TCAC
						
					

			
		

Sequences
Splice junction sequence	AAATTGTGATTTCTGAAGGGATATTGCTCGCAGATGTGTTACCCACATGGATTCGGCAACCAAC CATGACAATATCAGGGTTTGGGTTTGAAATAGTCACctgctacaccgaggacactgcaatgact caagggaagatgcttgaagattttcataaaatgaatcaagctcaatcatgaaattgcatgctgt gattggaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGCTACACCGAGGACACTGCAATGACTCAAGGGAAGATGCTTGAAGATTTTCATAAAATGAAT CAAGCTCAATCATGAAATTGCATGCTGTGATTGGAATGGGGAACTCAACCTTCAATTCTGTCTG ATTAAATGTAAGATGGCAGCTTTTAGCACGCTTCCAGAGAGACCAATTATTCTTCAGTTCTGAC AAATCTGTTACCGGCCTGTTGTTGTAATATAGGTTAAGTACTTTCACTGACTTTGACTTGCGAG CATCATAAACATTCATTGTCACCGACTGTATAGTAAAGCTTCCAGTACATTTCACTATTATCCT ATTGTCAGTGAATTTGGTCTCAGACTTCAAACTTTCAAGCTTCATTCTCGAATATGGAACATCT GGGCAGCTGCAGGTAACACAAGGCTCACTTTCCAAGTAATAGCCATCAAANNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCATTCCAACAAGAATGTATCAACAAAACGTTTCAGGAGATCA CCATCCTTACCAGTAAACACTACCACAGCCTGCTCCATGTCCATGCAGGATTTTTCTGAGGAGC CTTCAGAGCTATCGTCACCTTTCTGCTTCTTTTTTGAATCTGATGACTGTGAACCAGTCCTTGT GGAACTTCCAATATCTCCACTCTCTGTTTTCTGTGCATTATGGTTAGCATCTTTTCCTGAATAG AATGCTAGATTTAAAAGCTTGAGAGTCTGAACGATACATTCTTCACTGAAATAGTAGAAGTTAT CCATTAAAAAAGGAAGAAGATCTGTGTGCTTCAAGCAAAATTTTTGCCAATTTCTTGGCCTTGA TGCAGCCACATCACAAAGAGTAGACAAACATTTTATAAGCTTAACACTTCTCTCATAGGGCACA GGATTTCGAAAACCTCCAGACTTATTAATGATTTTATGAAGTTTCTTGACTTCATGTGAATATT GCCATGAATCCCTGACACTGTAATAATGAGTCTTGCTGCCACACAGATGAAGAAATAGCCTCCT TGCATACCTCCGAACAAACGTTGTATGAGCATTGCTGATATAACTACAAAGAACATCTTGGTAT CCATCTAACTTTAGATCCTTGGTGTTGGGAACCTTGCAACTTTTATCCTTATCAGCTGATTTTT CCTTTTCTGGTCGAACCATGCTATATACAAGCCTGAATGTATTCTCCAACAACAATTTGTAGTA GTCCATGAAAAGATCAGTGGGATGGGACTTGGCATATGAATCTGAGAAAAAGGGAGAGAAGTTT CCCGCTGGTAACTCTCTCCGTACTGTCAATAGGGATCCACAGCCTGAACTAGAAGAGCCACCTT CACCATTTATGGATGATGACTTGAAAACATGAACAAGTTGTTGCAGTATATCCATCAAATAGTT CAGAAAGGATTGCTGCCTGAGGGCAGAACAAGCACGAATTAACTGGGAAGCAAACTCATTTTTA TCATGGTCATCATTGGAGGATTGAAGAGTCGTGGTTGATACTTGGACATGAACAGGACCTTTTT CTGTCAAATCAGAGCTCCCACCTGACTTCGAATGAGAGCCATCAGTCCCAGGCTGATGCCAGTT ACGGAACATAAGTGTGAAAAACATGAAAACAAGGATAGATACTTCTCCGAAAGAACAACGTGTT TTCGCAGGAAATGGTTTACTTATATTGATTTCATCTATAAGCCACTTCACAAACTTTTCTAAAT CCAAATTTTCAGGTTTTGTGCTATCCATGAAAGGTCCGCCAACTGCAGATGAAAGTCTGTAAAA CAGCTGCATTATAGGTATAGCTCGAGTGCCAGCAGTGGTCTCCATCCAGCCACTAAGCTCTTCA ATTAAACGACTAAGTAGCAAAGAGTTAATGGCCCGTTTTGATGCAGAAATTGATACTGTCCTTT GTTCGGTCATGGAACCATGGAAATCTACAGACTCACTTGCATCCAGTACATGAATTGACGATGG TGAGGTCTGGATAGTTCTATCAGCAGGAGCTTGAAGGACACTGGAATCTGTTAGTTCATCAACA GATAAATGAATTTCATTTCCTTCTCCCCCAAATGTATCAAGCTCAATTGGTATTGCTGACATGG GATGATCTCTTGAATGTGGTGCAGGTAGACGATCTGCATCAAGTATCTCATAGCATGTTTCACA CAAGTCAAAGTCTGGACATATGTTGCAGTGCCACCTTCGCCTAAGTATTGGAACAGTGGAACAA CCATCACAACAATATTGCACTGAGGATGTGGCAGGATCTTCTTCAATCATGACCTGAGCATTTC CAGTGGTTGAATTTGAAGCAGCACTTGCTTTTGCATGATTGTCAGGAGCATCATCATTAGCAAT CATTGTCTGCTTTGGGAAAGGGACTTGGAGAAATCGTGATGAAATAGCCAAACTGCAAAGGCCA GCCAAAAAAAGAACATTGGAAAATGCATGAGTGCTTATAAGACTGAGACAATACTAGAATATGT CAAAAATCCTGCATAGGCAATACAAAAAAGACCACCTGCTTGAAGTCTGGACTGCTTCATATGG CGCAAATAGTAACTTCTTCAATAAAGCAACTGCAGGTGCTACTGAGACTCCAGATTTTTCATTT GAATGTAAGGCCAAGCATTCAGCATAGCTATAAATAAATTCCACACAGGGTACAACTAGGCTAT TTATCCTTTGCGTATCTGGCCTGTCTAAATCCAAAATACCCCAGAAAACTTGCATAAGACCATC AACTAGTTCAGTGCCTGCATAAGGATATATTAGTGTTTAGAATTTAGCAAATATGCCAATTCTA CCAGCCATATGTTGATACAGCAATAACATTCCTAATGATAAGAAGATTGCATTCACAATGTTGT ATGCATATATATTGCAATTGGAGTTGCATACATAAGTTGGCAAAGTAGCACACTCAAGCAAGAT AAACCAGCAACAGTTAATTCAGTGCTTGCACATCTTGGCAGTTACATACGATTCAAACTGCTGG CATACTCGTGGATATTACCCAACAAGTCTACTTTTAAAAATCACTTACCCTAGCTTTCTTGTGA CATTAAGGATAGCAACAGCTTAACCAGAACAGGAGACATACAACAGTTAACATAAAGAACACAG AGTATTGCTAGCTTGTTGCATTGAGTGATTGAAAGATATTAATATACTCCATCAAGAATTCTCT GTGCATGCACACAGGACACAACACATGACAATTTGCAGCATATAATCATTAATTACAGGACTAC AGCAAATCCGTTGAGTGTATAGGTTTTTACGCGAAAGAATCAAGGGAAACTTTTCTTACTCCTA GCTGCTTTTGGCATTGAGAGAACTTACAAAAGGACTTCTTTTGTATGATTTTTAGATGTATGAA ATCGATCAAATCAACAAGATCTTCAAAGATTATCAATCCCATCGCTTGCTCTTCAGCTTATTAG TCGCTGCCAAATTTTGAATTTTAAAACTTAATTTTGGAGTTGATTTTATGATTTTTTTTTCCAT TGTAGTTTATGTGCTTATTATAATCAGCTGTAAGCGAAACGATGGGGCTGCATAACGAATGTTT CATTTGGATTGGCAAAGATTCAGTATGACTAAATTGATTCTGCAAGACCAACATCCTATAACAC TTATGATAAAGTTCATAGTTTCCAGTAAGAATGTCACTGTTTTTTTTTTTTGTGTCTACTCCCT TTACATATAATTTTGGTCCATAACTTTTTGTTGTGTATTGGTAAAAGATTAACATTATCATAAC GGAAGTAATCATGATGAATATGTCAAAATCTCTCTCTCATGGCCAACACTGATGAAATGATGAT TGTAAATAGTAGTATATGAATGGTCAAACTTTCAAAAGATTAACTAGAATGCATAAAAAGAGTA AGAATTTCATGATTCAGATAAAGGAAATCATGACTCTTTTCTTCAACAAATGTTGGAGTGAAAT TAATACCGTGGGTCTCAAGAAAAGAAGCCAAGTTTGATTTCCTGTGCACAGCAACTTTTGACAC TGTGTGGATCTGGGCTATGAATTCTTTTGTAACCCAACTGGATGCAGCACCTCCAACTCCTATT CTTGAAGTAATTGATGGAAGTGATTTTATTACCCCTAGAAGGCGCATAGTATCCTTAACCTGGG AAAAAGATTAGAATAGCTTAAAAGTGTGACCACGAATAAAGTGAAAACAATAGTCCCATATAAA TATTAAGAACCATATACTTGGCATACATGATAGTATATTTCCTTCTTCGGGAACACAGCCTGAA GGACACGGCATGCAGCAGAATGTAACAGAGGCTCCCTGTCACTCTGAAAGATTGTTTCCAGCAA AGATCTGCATTTTAGATTGTTAAGTTCCATGTCTGCATCGATTGTGTCCGTACAGAAACCTGGT TGGCAAAGCAGGTATATCCGTGAGAGGATCCTGAGAGCATCTGCCAGAACCTGCTCCTGGATAG GAGCAGCTTGCATCGTTTGAGCCTTTTTTCCAGACTTTCCACTAGCAGAACTACCACCTAGGAC ATGCGCTTCCATATCAAGTGCAGCATCCATTTTTTCTTTCCATCCAAATTCATCTTTGGCACGA CCATACACTTCAATAGAATCTATCCGAGGAATAGATGAACCATCGAATGTCCGACCAACAACAA TTGTGAATTCTTCGTCAGCCAGAAGTGATTCAGCAGTAGTGAACGGAATATCATACCAAGATCT CATGCCTTCATCCAGCTTAATGACTCTATGAAAAATTGTGATTTCTGAAGGGATATTGCTCGCA GATGTGTTACCCACATGGATTCGGCAACCAACCATGACAATATCAGGGTTTGGGTTTGAAATAG TCAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							3223162-3223192(-)
3218318-3223170(-)
3223160-3218337(+)
						
						Potential amino acid sequence
						
							MVGCRIHVGNTSASNIPSEITIFHRVIKLDEGMRSWYDIPFTTAESLLADEEFTIVVGRTFDGS
SIPRIDSIEVYGRAKDEFGWKEKMDAALDMEAHVLGGSSASGKSGKKAQTMQAAPIQEQVLADA
LRILSRIYLLCQPGFCTDTIDADMELNNLKCRSLLETIFQSDREPLLHSAACRVLQAVFPKKEI
YYHVKDTMRLLGVIKSLPSITSRIGVGGAASSWVTKEFIAQIHTVSKVAVHRKSNLASFLETHG
TELVDGLMQVFWGILDLDRPDTQRINSLVVPCVEFIYSYAECLALHSNEKSGVSVAPAVALLKK
LLFAPYEAVQTSSSLAISSRFLQVPFPKQTMIANDDAPDNHAKASAASNSTTGNAQVMIEEDPA
TSSVQYCCDGCSTVPILRRRWHCNICPDFDLCETCYEILDADRLPAPHSRDHPMSAIPIELDTF
GGEGNEIHLSVDELTDSSVLQAPADRTIQTSPSSIHVLDASESVDFHGSMTEQRTVSISASKRA
INSLLLSRLIEELSGWMETTAGTRAIPIMQLFYRLSSAVGGPFMDSTKPENLDLEKFVKWLIDE
INISKPFPAKTRCSFGEVSILVFMFFTLMFRNWHQPGTDGSHSKSGGSSDLTEKGPVHVQVSTT
TLQSSNDDHDKNEFASQLIRACSALRQQSFLNYLMDILQQLVHVFKSSSINGEGGSSSSGCGSL
LTVRRELPAGNFSPFFSDSYAKSHPTDLFMDYYKLLLENTFRLVYSMVRPEKEKSADKDKSCKV
PNTKDLKLDGYQDVLCSYISNAHTTFVRRYARRLFLHLCGSKTHYYSVRDSWQYSHEVKKLHKI
INKSGGFRNPVPYERSVKLIKCLSTLCDVAASRPRNWQKFCLKHTDLLPFLMDNFYYFSEECIV
QTLKLLNLAFYSGKDANHNAQKTESGDIGSSTRTGSQSSDSKKKQKGDDSSEGSSEKSCMDMEQ
AVVVFTDVPYSRMKLESLKSETKFTDNRIIVKCTGSFTIQSVTMNVYDARKSKSVKVLNLYYNN
RPVTDLSELKNNWSLWKRAKSCHLTFNQTELKVEFPIPITACNFMIELDSFYENLQASSLESLQ
CPRCSR*(-)
MKIFKHLPLSHCSVLGVAGDYFKPKP*(-)
MTISGFGFEIVTCYTEDTAMTQGKMLEDFHKMNQAQS*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	3223162-3223192(-) 3218318-3223170(-) 3223160-3218337(+)
Potential amino acid sequence	MVGCRIHVGNTSASNIPSEITIFHRVIKLDEGMRSWYDIPFTTAESLLADEEFTIVVGRTFDGS SIPRIDSIEVYGRAKDEFGWKEKMDAALDMEAHVLGGSSASGKSGKKAQTMQAAPIQEQVLADA LRILSRIYLLCQPGFCTDTIDADMELNNLKCRSLLETIFQSDREPLLHSAACRVLQAVFPKKEI YYHVKDTMRLLGVIKSLPSITSRIGVGGAASSWVTKEFIAQIHTVSKVAVHRKSNLASFLETHG TELVDGLMQVFWGILDLDRPDTQRINSLVVPCVEFIYSYAECLALHSNEKSGVSVAPAVALLKK LLFAPYEAVQTSSSLAISSRFLQVPFPKQTMIANDDAPDNHAKASAASNSTTGNAQVMIEEDPA TSSVQYCCDGCSTVPILRRRWHCNICPDFDLCETCYEILDADRLPAPHSRDHPMSAIPIELDTF GGEGNEIHLSVDELTDSSVLQAPADRTIQTSPSSIHVLDASESVDFHGSMTEQRTVSISASKRA INSLLLSRLIEELSGWMETTAGTRAIPIMQLFYRLSSAVGGPFMDSTKPENLDLEKFVKWLIDE INISKPFPAKTRCSFGEVSILVFMFFTLMFRNWHQPGTDGSHSKSGGSSDLTEKGPVHVQVSTT TLQSSNDDHDKNEFASQLIRACSALRQQSFLNYLMDILQQLVHVFKSSSINGEGGSSSSGCGSL LTVRRELPAGNFSPFFSDSYAKSHPTDLFMDYYKLLLENTFRLVYSMVRPEKEKSADKDKSCKV PNTKDLKLDGYQDVLCSYISNAHTTFVRRYARRLFLHLCGSKTHYYSVRDSWQYSHEVKKLHKI INKSGGFRNPVPYERSVKLIKCLSTLCDVAASRPRNWQKFCLKHTDLLPFLMDNFYYFSEECIV QTLKLLNLAFYSGKDANHNAQKTESGDIGSSTRTGSQSSDSKKKQKGDDSSEGSSEKSCMDMEQ AVVVFTDVPYSRMKLESLKSETKFTDNRIIVKCTGSFTIQSVTMNVYDARKSKSVKVLNLYYNN RPVTDLSELKNNWSLWKRAKSCHLTFNQTELKVEFPIPITACNFMIELDSFYENLQASSLESLQ CPRCSR(-) MKIFKHLPLSHCSVLGVAGDYFKPKP(-) MTISGFGFEIVTCYTEDTAMTQGKMLEDFHKMNQAQS*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA030171_circ_g.4

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